G74717


Basic Information

Item Value
gene id G74717
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 33025421 ~ 33025846 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88542
ttcagctaagaccattcatcatgttcactgttatattcatgtgtctgtggctttcactaggtgactccatggcagattcaatacagccactttcccctcgtgaagttgtagatgaaggtgatgatgttactctgtcctgcaaataCAAACCCAGCATTACTACAGGAAACtacctgcagtggtacagacaatatccaaaatctaaacctgagttccttctttatatttctcaagAAATATTTCTGAGTCCCAACAGAccccca

Function

GO: NA

KEGG:

id description
ko04060 Cytokine-cytokine receptor interaction
ko04062 Chemokine signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
TU88542 True 263 lncRNA 0.41 2 33025421 33025846

Neighbor

gene id symbol gene type direction distance location
LOC117597142 NA coding downstream 28529 32996356 ~ 32996892 (-)
LOC117597141 NA coding downstream 47721 32972785 ~ 32977700 (-)
LOC117596934 NA coding downstream 180151 32844101 ~ 32845270 (-)
LOC117596924 NA coding downstream 189699 32835039 ~ 32835722 (-)
LOC117597140 NA coding downstream 199854 32823558 ~ 32825567 (-)
LOC117597007 NA coding upstream 7172 33033018 ~ 33033661 (-)
c4h14orf119 LOC108267721 coding upstream 105241 33131087 ~ 33135775 (-)
cbln12 LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140 coding upstream 140096 33165942 ~ 33168027 (-)
LOC117596966 NA non-coding downstream 152398 32871746 ~ 32873023 (-)
G74702 NA non-coding downstream 162762 32862207 ~ 32862659 (-)
LOC117596967 NA non-coding downstream 174046 32849927 ~ 32851375 (-)
LOC113540133 NA non-coding downstream 209140 32815429 ~ 32816281 (-)
LOC117597139 NA non-coding downstream 213686 32810432 ~ 32811735 (-)
G74720 NA non-coding upstream 5196 33031042 ~ 33031426 (-)
G74731 NA non-coding upstream 58552 33084398 ~ 33084836 (-)
G74736 NA non-coding upstream 82283 33108129 ~ 33108638 (-)
G74737 NA non-coding upstream 88898 33114744 ~ 33114997 (-)
G74744 NA non-coding upstream 96746 33122592 ~ 33122959 (-)
LOC117597177 NA other downstream 53908 32971004 ~ 32971513 (-)
LOC117597170 NA other downstream 74927 32949834 ~ 32950494 (-)
LOC117597171 NA other downstream 78263 32946134 ~ 32947158 (-)
G74703 NA other downstream 156955 32865946 ~ 32868466 (-)
LOC117596929 NA other downstream 360001 32661892 ~ 32665420 (-)
LOC117597009 NA other upstream 9057 33034903 ~ 33042101 (-)
LOC117597008 NA other upstream 11215 33037061 ~ 33037706 (-)
LOC117597193 NA other upstream 31652 33057498 ~ 33058362 (-)
LOC117597189 NA other upstream 56351 33082197 ~ 33083322 (-)
LOC117596990 NA other upstream 64360 33090206 ~ 33091128 (-)

Expression


Co-expression Network