G74720


Basic Information

Item Value
gene id G74720
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 33031042 ~ 33031426 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88545
acttactgtacatagtgagatacacaccactgattctcactctagctacagcaggcagttttgcagataaaattgggccgacggatgaagataccaacattatcagcaaagaaacagacactgttactctgaaatgttcatatgagacAAGCAGTAACATCCGgctttactggtacaaacaatatcctaacagcgcaccacagtttttactgtatgtTGGTGGCACTCCCAGTGATCCTC

Function

GO:

id name namespace
GO:0016064 immunoglobulin mediated immune response biological_process
GO:0002250 adaptive immune response biological_process
GO:0072376 protein activation cascade biological_process
GO:0006956 complement activation biological_process
GO:0006958 complement activation, classical pathway biological_process
GO:0006959 humoral immune response biological_process
GO:0002443 leukocyte mediated immunity biological_process
GO:0002449 lymphocyte mediated immunity biological_process
GO:0002455 humoral immune response mediated by circulating immunoglobulin biological_process
GO:0002460 adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains biological_process
GO:0019724 B cell mediated immunity biological_process

KEGG:

id description
ko04650 Natural killer cell mediated cytotoxicity

RNA

RNA id representative length rna type GC content exon number start site end site
TU88545 True 240 lncRNA 0.43 2 33031042 33031426

Neighbor

gene id symbol gene type direction distance location
LOC117597142 NA coding downstream 34150 32996356 ~ 32996892 (-)
LOC117597141 NA coding downstream 53342 32972785 ~ 32977700 (-)
LOC117596934 NA coding downstream 185772 32844101 ~ 32845270 (-)
LOC117596924 NA coding downstream 195320 32835039 ~ 32835722 (-)
LOC117597140 NA coding downstream 205475 32823558 ~ 32825567 (-)
LOC117597007 NA coding upstream 1592 33033018 ~ 33033661 (-)
c4h14orf119 LOC108267721 coding upstream 99661 33131087 ~ 33135775 (-)
cbln12 LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140 coding upstream 134516 33165942 ~ 33168027 (-)
G74717 NA non-coding downstream 5196 33025421 ~ 33025846 (-)
LOC117596966 NA non-coding downstream 158019 32871746 ~ 32873023 (-)
G74702 NA non-coding downstream 168383 32862207 ~ 32862659 (-)
LOC117596967 NA non-coding downstream 179667 32849927 ~ 32851375 (-)
LOC113540133 NA non-coding downstream 214761 32815429 ~ 32816281 (-)
G74731 NA non-coding upstream 52972 33084398 ~ 33084836 (-)
G74736 NA non-coding upstream 76703 33108129 ~ 33108638 (-)
G74737 NA non-coding upstream 83318 33114744 ~ 33114997 (-)
G74744 NA non-coding upstream 91166 33122592 ~ 33122959 (-)
G74748 NA non-coding upstream 94241 33125667 ~ 33125874 (-)
LOC117597177 NA other downstream 59529 32971004 ~ 32971513 (-)
LOC117597170 NA other downstream 80548 32949834 ~ 32950494 (-)
LOC117597171 NA other downstream 83884 32946134 ~ 32947158 (-)
G74703 NA other downstream 162576 32865946 ~ 32868466 (-)
LOC117596929 NA other downstream 365622 32661892 ~ 32665420 (-)
LOC117597009 NA other upstream 3477 33034903 ~ 33042101 (-)
LOC117597008 NA other upstream 5635 33037061 ~ 33037706 (-)
LOC117597193 NA other upstream 26072 33057498 ~ 33058362 (-)
LOC117597189 NA other upstream 50771 33082197 ~ 33083322 (-)
LOC117596990 NA other upstream 58780 33090206 ~ 33091128 (-)

Expression


Co-expression Network