cbln12 (LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140)


Basic Information

Item Value
gene id cbln12
gene name LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 33165942 ~ 33168027 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026912175.2
GGGATAAATAAGGCAGGAGTCATATGCTTCGTAGCTTTTCCAGTCTCTTCTCGCTTTATCCTGCACTGCAGAGGAGAAATGGCTGCATCAGACAGATCCTTTGATGATGGCTCTCAAATgtaatttcaattaaaaaacCTCCATATGCTTTTCCCACAGATACCATAGCAATCTATCAAGAAAATcacagtatttgtttttttttaaaagaaaaaaacattgtttgaagagggagaaaagaggaagagagaagccTCTTAGcccttttaatttaaaatttatttcaccTAGTACATTACGTGGATTATCAGCATCATTTAAGAGCATGCATACAGTGCTAGTTTGTCTATCCACCGGCGTGCCCACTCTTCTGGGGTTAATTCTGCTGTGGAATCCGTTGGTGGTTACAAGTCAGAATGACACTGAGCCTATTGTACTGGAAGGTAAATGTTTAGTTGTCTGTGACTCAACACCTTCTTCAGAACCTGCGAATAATGCATTGGGCATGTCAGTGCGCTCTGGCACTGGCCGAGTGGCCTTCTCTGCCACTCGCCAAACCAACCACGAGCCCACAGACATGAGCAATCGTACCATGATCATCTACTTTGATCAGATCTTGGTGAATGTGGGAGGTCATTTTGACCAGGAGAGCAGCGTCTTCTTAGCCCCAAGGAGAGGAGTGTACAGCTTTAACTTCCATGTAGTGAAAGCTTACAACAGACAAACCATACAGGTGAGCCTGATGCTTAATGGATGGCCAATGATTTCTGCCTTTGCTGGTGACCAGGATGTAACCAGAGAAGCAGCCACTAATGCTGGATTGGTGATCATGGAGAGGGGTGACAAGGCCTACCTGAAACTGGAGCGGGGCAATTTGATGGGGGGCTGGAAATATTCCACTTTCTCAGGCTTTCTGGTCTTCCCCCTGTAAAATAATACACATATCAAACCATGTGTACAGAAGGATTGGCCAGAAAACTGATTTAAATTAacagagctgaaaaaaaatgtcattatgtCCAAGCAAGCAAGACTAATCTAACagtagaataataaaatatcagatGATTTATAAGGAAACATATACAATCTGATCTTATTTTTCAGAgttaattaacattatatataaaatccttTAAGCAagatcattaaatataaataagaaacagga
>XM_026912176.2
ATAAGGCAGGAGTCATATGCTTCGTAGCTTTTCCAGTCTCTTCTCGCTTTATCCTGCACTGCAGAGGAGAAATGGCTGCATCAGACAGGTGACTTACTCTCTTTCAATCAATCCTTTGATGATGGCTCTCAAATgtaatttcaattaaaaaacCTCCATATGCTTTTCCCACAGATACCATAGCAATCTATCAAGAAAATcacagtatttgtttttttttaaaagaaaaaaacattgtttgaagagggagaaaagaggaagagagaagccTCTTAGcccttttaatttaaaatttatttcaccTAGTACATTACGTGGATTATCAGCATCATTTAAGAGCATGCATACAGTGCTAGTTTGTCTATCCACCGGCGTGCCCACTCTTCTGGGGTTAATTCTGCTGTGGAATCCGTTGGTGGTTACAAGTCAGAATGACACTGAGCCTATTGTACTGGAAGGTAAATGTTTAGTTGTCTGTGACTCAACACCTTCTTCAGAACCTGCGAATAATGCATTGGGCATGTCAGTGCGCTCTGGCACTGGCCGAGTGGCCTTCTCTGCCACTCGCCAAACCAACCACGAGCCCACAGACATGAGCAATCGTACCATGATCATCTACTTTGATCAGATCTTGGTGAATGTGGGAGGTCATTTTGACCAGGAGAGCAGCGTCTTCTTAGCCCCAAGGAGAGGAGTGTACAGCTTTAACTTCCATGTAGTGAAAGCTTACAACAGACAAACCATACAGGTGAGCCTGATGCTTAATGGATGGCCAATGATTTCTGCCTTTGCTGGTGACCAGGATGTAACCAGAGAAGCAGCCACTAATGCTGGATTGGTGATCATGGAGAGGGGTGACAAGGCCTACCTGAAACTGGAGCGGGGCAATTTGATGGGGGGCTGGAAATATTCCACTTTCTCAGGCTTTCTGGTCTTCCCCCTGTAAAATAATACACATATCAAACCATGTGTACAGAAGGATTGGCCAGAAAACTGATTTAAATTAacagagctgaaaaaaaatgtcattatgtCCAAGCAAGCAAGACTAATCTAACagtagaataataaaatatcagatGATTTATAAGGAAACATATACAATCTGATCTTATTTTTCAGAgttaattaacattatatataaaatccttTAAGCAagatcattaaatataaataagaaacagga

Function

NR:

description
cerebellin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026912175.2 False 1171 mRNA 0.41 4 33165942 33168027
XM_026912176.2 True 1186 mRNA 0.41 4 33165942 33168020

Neighbor

gene id symbol gene type direction distance location
c4h14orf119 LOC108267721 coding downstream 30167 33131087 ~ 33135775 (-)
LOC117597007 NA coding downstream 132281 33033018 ~ 33033661 (-)
LOC117597142 NA coding downstream 169050 32996356 ~ 32996892 (-)
LOC117597141 NA coding downstream 188242 32972785 ~ 32977700 (-)
LOC117596934 NA coding downstream 320672 32844101 ~ 32845270 (-)
G74748 NA non-coding downstream 40068 33125667 ~ 33125874 (-)
G74744 NA non-coding downstream 42983 33122592 ~ 33122959 (-)
G74737 NA non-coding downstream 50945 33114744 ~ 33114997 (-)
G74736 NA non-coding downstream 57304 33108129 ~ 33108638 (-)
G74731 NA non-coding downstream 81106 33084398 ~ 33084836 (-)
LOC117597144 NA other downstream 40798 33120792 ~ 33125144 (-)
LOC117597199 NA other downstream 55624 33109818 ~ 33110318 (-)
LOC117597204 NA other downstream 64302 33101134 ~ 33101640 (-)
LOC117597195 NA other downstream 66454 33098751 ~ 33099488 (-)
LOC117596990 NA other downstream 74814 33090206 ~ 33091128 (-)

Expression


Co-expression Network