c4h14orf119 (LOC108267721)


Basic Information

Item Value
gene id c4h14orf119
gene name LOC108267721
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 33131087 ~ 33135775 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026912179.2
actggcggtaatgagacacaggtgagaatcatcatgcgTTACCTGGCGGTtcgacccgcctcctctccgtctgcagctgatgctcgaccacgccccGCTGCCACACTCCCTATCTGAGCTAGCCTGATAAACATACTCTCCACTCGCTTCATTGCCTAAGTGAAAACAAATCAATGTATTACATCAGTATTATGAGATTTTCTTCATAGAATATTTTAGCTAAATTTATCAAATAGCAAATGTGGATTGCtgcactagctagctagttgatTCACCCCACAGCTTCCAGAAACATAGTTTAGTTATTAGCTACTGGCAGATAGATGCTAGCTAGCAAAGTAATCTCCAATCTGGCAGTTTACCCCATGCCACCCCGGCTGAGAATAAGAGGTGTGCATATGAGAGATTTTAAAGGTGTTAGTGCACATCTTAAGATAcagatttaattaatataatgtatgCAAAACAGCAAGCCAGGGATAAAACAATCAATCAGCAGCATGGGAGCTCAAATCCAAGTGAAAAGCACAGACCGAGCTGCAGTGGTGACTGCGTGGCCTTTAGATGTTGTCAGGGACACAATGCCATTCACGCTACAGGTATAATGTGCTCAGGACCACCTGTGCAAGGCATTTAGCGTGATCCGATCACCAAGACACATTCAACCTGTCGAGATAATTACTTAGCACGGACACTGATTACCTGATAAGGATGTTAATACCAGGTCTGAAAGGGAAAATGGCCTGGTTTCATCATGCTCTGCAAGAAGCAAGCCTACCACAGTCACCTTCCACGAAGAGTCATACAACGAATAATCACGCATGCCTCGAGCCAAACCCCAGATCAGCTACGCCGGTAGCTTTATCCGAGGGCCAAGATTGGCCTCAGCTCCTCCAGTCCTCCATCACGTCCTACCCTTCTGCTTCACAAGAAATGGTCTGCTCGAGAGTGGGAGAGCACCAGCATACCTCGTCCCTCACTCAGAGTGACGGTCCAGTGCCTCTGTCATACGTGACTCTCCAGGAACAGCGCTGTGTGCTTAGCTGGTTTCTTGGCTGGGGTCCTTCTCAAAGAGAATGTTTTCTTCAAGACCTGATTTCAAAGGCAGTACCAGGAAAGGTTTGCAGCTTATTGGAGCACCTTAATAAACTTCAGGTGAAGGACCGGCCTCCCAACATTTTTGAGTGTCAGCTGAGGCTGTGGACACAGTGGTTTGATACGTGGACTGAAGAGGAAAGGAATGCCTTCTTGGCCACCCTGGAAGAGAAGGATCCAATGTTTGTAGCTCAGTTCTACAAAGTGCTAGCTAGTACTGCAGGAAGGGACTGATGGCctctgtataaataaattgttgttttttttccctgccaTCATCTATCACAGCGCATTCAACCCTGCCCTTCCTCTTAGATAAGGAATTCCTCAGTAAACGTTCCTCAGATTAATATCAGTATGCAGGGTGATCACCTGAAGGAGACAGCAGAATGCCGTTCTTTGCTATTTCCTTATTCTGTAATGTCGTTCAGGTGATCACCCTGCCTACTGATCTTAGTTCTGAAGAACTTTTACTGAGGAATTCTTTATGTAAGGGGAAGAGCAGGgttgaatgtgctgttataaatgACAGCATGAATGAATATTGAGGCATGATGTCAAAATATGATTAAAGTGAAAGTGTTGCTGATTTCAtacatgaaaacagaaaatctcAATGGTCACATGTCGAGTGTATGATCGCCACATTGCCTGCGTGGTCTGTATCTGCTTGATGCCAGGAATTGTatgttaatttacatttaattagaaCACTGATTTACACACTCCTCATAACAAACagtattttgctattttttaaattgtaatatgACACTGTAAAATTGGTTTTCAATTATTTTGAGTTTACTGTGCACACCACTATATCAGCTAATCACTTGTTATGTTCATTTATGAAGATGCtgataattaaattaataaaaggctgaaaaatgta
>XM_026912180.2
aagaagaagcagcagcgGAAGCGGAAGTGCTGGGctcatgtttatgtttttgtttagttgtttttttgtggaGACAAATCTTAAAAAAACTAAACCAGACAGTGAAACCTCAGCTGTGCGACAGTGTGAATAATCGTGTGGTGAATTAGGATCTGCTGTAAAACATTCTGGAcgtgaaaactgttttttttttattttatttttaaaagaggtGATGAGGGTCAGAAACAGATCACCTTCCTGACAGAAACagagggactgtgtgtgtgtgtgtgtgtgtgtgttttctgcatcTCTTGCATAAAATGGCCTGGTTTCATCATGCTCTGCAAGAAGCAAGCCTACCACAGTCACCTTCCACGAAGAGTCATACAACGAATAATCACGCATGCCTCGAGCCAAACCCCAGATCAGCTACGCCGGTAGCTTTATCCGAGGGCCAAGATTGGCCTCAGCTCCTCCAGTCCTCCATCACGTCCTACCCTTCTGCTTCACAAGAAATGGTCTGCTCGAGAGTGGGAGAGCACCAGCATACCTCGTCCCTCACTCAGAGTGACGGTCCAGTGCCTCTGTCATACGTGACTCTCCAGGAACAGCGCTGTGTGCTTAGCTGGTTTCTTGGCTGGGGTCCTTCTCAAAGAGAATGTTTTCTTCAAGACCTGATTTCAAAGGCAGTACCAGGAAAGGTTTGCAGCTTATTGGAGCACCTTAATAAACTTCAGGTGAAGGACCGGCCTCCCAACATTTTTGAGTGTCAGCTGAGGCTGTGGACACAGTGGTTTGATACGTGGACTGAAGAGGAAAGGAATGCCTTCTTGGCCACCCTGGAAGAGAAGGATCCAATGTTTGTAGCTCAGTTCTACAAAGTGCTAGCTAGTACTGCAGGAAGGGACTGATGGCctctgtataaataaattgttgttttttttccctgccaTCATCTATCACAGCGCATTCAACCCTGCCCTTCCTCTTAGATAAGGAATTCCTCAGTAAACGTTCCTCAGATTAATATCAGTATGCAGGGTGATCACCTGAAGGAGACAGCAGAATGCCGTTCTTTGCTATTTCCTTATTCTGTAATGTCGTTCAGGTGATCACCCTGCCTACTGATCTTAGTTCTGAAGAACTTTTACTGAGGAATTCTTTATGTAAGGGGAAGAGCAGGgttgaatgtgctgttataaatgACAGCATGAATGAATATTGAGGCATGATGTCAAAATATGATTAAAGTGAAAGTGTTGCTGATTTCAtacatgaaaacagaaaatctcAATGGTCACATGTCGAGTGTATGATCGCCACATTGCCTGCGTGGTCTGTATCTGCTTGATGCCAGGAATTGTatgttaatttacatttaattagaaCACTGATTTACACACTCCTCATAACAAACagtattttgctattttttaaattgtaatatgACACTGTAAAATTGGTTTTCAATTATTTTGAGTTTACTGTGCACACCACTATATCAGCTAATCACTTGTTATGTTCATTTATGAAGATGCtgataattaaattaataaaaggctgaaaaatgta
>XM_026912181.2
tttttcatttgattttatttcttaaaagcAGCTGCGTTCCGCATGTAAAGCTCTGATTATAGAGTAAATATTAAAACCCAGTCAAGCTAAATAACTTCCTCATGCATATGGAAGCAAAAAGAAAATGGCCTGGTTTCATCATGCTCTGCAAGAAGCAAGCCTACCACAGTCACCTTCCACGAAGAGTCATACAACGAATAATCACGCATGCCTCGAGCCAAACCCCAGATCAGCTACGCCGGTAGCTTTATCCGAGGGCCAAGATTGGCCTCAGCTCCTCCAGTCCTCCATCACGTCCTACCCTTCTGCTTCACAAGAAATGGTCTGCTCGAGAGTGGGAGAGCACCAGCATACCTCGTCCCTCACTCAGAGTGACGGTCCAGTGCCTCTGTCATACGTGACTCTCCAGGAACAGCGCTGTGTGCTTAGCTGGTTTCTTGGCTGGGGTCCTTCTCAAAGAGAATGTTTTCTTCAAGACCTGATTTCAAAGGCAGTACCAGGAAAGGTTTGCAGCTTATTGGAGCACCTTAATAAACTTCAGGTGAAGGACCGGCCTCCCAACATTTTTGAGTGTCAGCTGAGGCTGTGGACACAGTGGTTTGATACGTGGACTGAAGAGGAAAGGAATGCCTTCTTGGCCACCCTGGAAGAGAAGGATCCAATGTTTGTAGCTCAGTTCTACAAAGTGCTAGCTAGTACTGCAGGAAGGGACTGATGGCctctgtataaataaattgttgttttttttccctgccaTCATCTATCACAGCGCATTCAACCCTGCCCTTCCTCTTAGATAAGGAATTCCTCAGTAAACGTTCCTCAGATTAATATCAGTATGCAGGGTGATCACCTGAAGGAGACAGCAGAATGCCGTTCTTTGCTATTTCCTTATTCTGTAATGTCGTTCAGGTGATCACCCTGCCTACTGATCTTAGTTCTGAAGAACTTTTACTGAGGAATTCTTTATGTAAGGGGAAGAGCAGGgttgaatgtgctgttataaatgACAGCATGAATGAATATTGAGGCATGATGTCAAAATATGATTAAAGTGAAAGTGTTGCTGATTTCAtacatgaaaacagaaaatctcAATGGTCACATGTCGAGTGTATGATCGCCACATTGCCTGCGTGGTCTGTATCTGCTTGATGCCAGGAATTGTatgttaatttacatttaattagaaCACTGATTTACACACTCCTCATAACAAACagtattttgctattttttaaattgtaatatgACACTGTAAAATTGGTTTTCAATTATTTTGAGTTTACTGTGCACACCACTATATCAGCTAATCACTTGTTATGTTCATTTATGAAGATGCtgataattaaattaataaaaggctgaaaaatgta

Function

NR:

description
PREDICTED: uncharacterized protein C14orf119 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026912179.2 True 1990 mRNA 0.43 3 33131087 33134319
XM_026912180.2 False 1557 mRNA 0.42 3 33131087 33135775
XM_026912181.2 False 1376 mRNA 0.42 3 33131087 33135467

Neighbor

gene id symbol gene type direction distance location
LOC117597007 NA coding downstream 97426 33033018 ~ 33033661 (-)
LOC117597142 NA coding downstream 134195 32996356 ~ 32996892 (-)
LOC117597141 NA coding downstream 153387 32972785 ~ 32977700 (-)
LOC117596934 NA coding downstream 285817 32844101 ~ 32845270 (-)
LOC117596924 NA coding downstream 295365 32835039 ~ 32835722 (-)
cbln12 LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140 coding upstream 30167 33165942 ~ 33168027 (-)
G74748 NA non-coding downstream 5213 33125667 ~ 33125874 (-)
G74744 NA non-coding downstream 8128 33122592 ~ 33122959 (-)
G74737 NA non-coding downstream 16090 33114744 ~ 33114997 (-)
G74736 NA non-coding downstream 22449 33108129 ~ 33108638 (-)
G74731 NA non-coding downstream 46251 33084398 ~ 33084836 (-)
LOC117597144 NA other downstream 5943 33120792 ~ 33125144 (-)
LOC117597199 NA other downstream 20769 33109818 ~ 33110318 (-)
LOC117597204 NA other downstream 29447 33101134 ~ 33101640 (-)
LOC117597195 NA other downstream 31599 33098751 ~ 33099488 (-)
LOC117596990 NA other downstream 39959 33090206 ~ 33091128 (-)

Expression


Co-expression Network