badb


Basic Information

Item Value
gene id badb
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 16819404 ~ 16823151 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935841.2
GTAAGATGAGTCGTGCtacagatctggcaaccctgctcagCGCCAAACACACTCTTCAGGTTAGGTGGTATCGAGGGTGGTTTACTGCTGTGGAGCCGGAGACTGGCGCCAAAATTCGTTCTCACAATGGCTAAAATATGCACGATATCAGATGAGTCTGACCCATCAGGTGATCAAGAAGACACAGAGCACCTACAGGCCAAGCAGGGAGCCGAGGCGTCTCACTCTGAGCACTCCCTAGCTGTTACACAGACATCCCGAGGAGAGGTAATGGCAAGGTGCAGgaatttctctgtaaatgaaGAGGACTTCCAGGAGGCTAGTGATGGGAAATCTGGAGATGGAGATCCTTTCCGACCTCGGTCCCGCTCAGCACCTCCAGTTTTATGGGCCGCCAAGAAATACGGCAGAGAGCTGAGGAAGATGAGCGATGAGTTTGACACCTTACTCGACaaagggATGAAGAGGGTGAGGAGTGCAGGTACAGCCTGTCAGATGCGCACCTCCCCCAGCTGGTTCAACTTCCTCTGGAGCCACCAAGAGTCAGACACTGAGACCGTGAGCAGTCTGACAGCTCAAAACACCCGTCCTGCAGAGTGACACATCAGTGGAGcacacagcgagagagagagagagagagagagcactggttATGCCGTATATAAAGGATGAAGAGGAAGCTCTCAGAACCCAGAAGTGAAGGACTGATGCTCTGTCTTAATGGACTATTATAAAACTTTCCTCAGAAGTTGTTGGATACCTGGACCTTTGACCAGTCAGTCTCCAACATCGCCTGAGTGATGTTTActactacagaaaaaaaaacagatggagaTTCTTTCCTGGGTCTGTGCTCCATTACTGTGGGCAAACTATGCAAGCTGTTTTGTGAGAATGACCGGttagttcagtgtgtgtgagattcagTCAGAACTACTGGAGCATGAAGAAGGATGCAACGTCATTCACTGCCATCTTTCAGGGCTGTAGGGAAATGATTCTTGTCTATGGTATGGGCTAATGAAATCTGAACAAACACAGTAACAAACATATCTTTCAGGTGCAAATTTTTATAACTTTTACCACCCCTTTCCATTGATACAGCCTTAACTGAAAGATATAGATGAATGATTTTCAGCAAATAAACATACTAAATCAACAGatgattaattttaaaataaaacataagtaAGAGCTGATCTATCCTGTTGATCTGTGTAGGGCTATGAAGCGTGGGTGGACAGGACTTTGAACagtttttgtgtatgtttttacacCTTCTGCTATCTCTATCTTTATGGAACATTCTACAGCCTTAGAGCAATAAAGACCAGAA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0043065 positive regulation of apoptotic process biological_process
GO:0005739 mitochondrion cellular_component

KEGG:

id description
K02158 BAD; Bcl-2-antagonist of cell death

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935841.2 True 1336 mRNA 0.46 4 16819404 16823151

Neighbor

gene id symbol gene type direction distance location
LOC113539980 majin coding downstream 3615 16810684 ~ 16815789 (-)
gpha2 gpha2 coding downstream 11268 16805860 ~ 16808136 (-)
arl2 arl2,LOC107588185,LOC107668402 coding downstream 51366 16762866 ~ 16768038 (-)
rcor2 rcor2,LOC107588183,LOC107668449,LOC107749809 coding downstream 92549 16715205 ~ 16726855 (-)
adad2 LOC108267669 coding downstream 149987 16663129 ~ 16669417 (-)
dysf dysf coding upstream 279378 17102529 ~ 17179641 (-)
cd99l2 cd99l2 coding upstream 506396 17329547 ~ 17343282 (-)
zgc:92664 cssa04h17orf49,clg07h17orf49,LOC108267800,LOC108434657,LOC103038770,LOC107561866,LOC107594707,LOC107668195,LOC107678180,LOC105902403,LOC105027650 coding upstream 710014 17533165 ~ 17536773 (-)
ache ache,LOC108267799,LOC107668174,LOC107593784,LOC107750572,LOC107749789 coding upstream 717439 17540590 ~ 17553140 (-)
LOC113539922 snapc2 coding upstream 825079 17648230 ~ 17651920 (-)
G65722 NA non-coding downstream 15150 16803195 ~ 16804254 (-)
G65718 NA non-coding downstream 81491 16736153 ~ 16737913 (-)
LOC117597072 NA non-coding downstream 83507 16728691 ~ 16735897 (-)
G65715 NA non-coding downstream 134813 16675260 ~ 16684591 (-)
G65700 NA non-coding downstream 212812 16606007 ~ 16606592 (-)
G65809 NA non-coding upstream 114062 16937213 ~ 16937420 (-)
LOC117597208 NA non-coding upstream 257013 17080164 ~ 17095201 (-)
G65984 NA non-coding upstream 431679 17254830 ~ 17309084 (-)
G66028 NA non-coding upstream 487236 17310387 ~ 17311060 (-)
G66056 NA non-coding upstream 579471 17402622 ~ 17403815 (-)
bmp15 LOC108267203 other downstream 213687 16603809 ~ 16605717 (-)
leap2 LOC100304644 other downstream 224899 16592562 ~ 16594505 (-)
tnfsf12 tnfsf12 other downstream 392780 16419164 ~ 16426624 (-)
acox3 acox3 other downstream 747712 16054528 ~ 16071692 (-)
smim20 NA other downstream 827419 15973579 ~ 15991985 (-)
G66053 NA other upstream 577443 17400594 ~ 17402464 (-)
rnaseka LOC108267746 other upstream 616326 17439477 ~ 17444188 (-)
G66281 NA other upstream 770597 17593748 ~ 17634868 (-)
map11 c7h7orf43,cunh7orf43,si:dkey-3k24.5,LOC107687048,LOC107594676,LOC107754664,LOC107561780,LOC105895567 other upstream 969075 17792226 ~ 17839915 (-)
LOC113540242 adamtsl1 other upstream 2226999 19050150 ~ 19155221 (-)

Expression


Co-expression Network