kif2c (kif2c)


Basic Information

Item Value
gene id kif2c
gene name kif2c
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 24859026 ~ 24871263 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026935923.2
TCGTACTTCCGGTTAGATGAACAACTTCCGCTGACGTATTTTGAAAGCTTGGCGGTTGAGAAGTTTTTTGTACATACGACAGGCTTGTTGTGTTGCGCTGGCTGAAGGattgggttttatttttatttttaaaagcttgTGTTTATATTAAGTAGGGTAAAATGGACCCAGCAGCTGCGACGCTTCTTGTTGGACTTGCTGTCAAAATTAGCCGCAGTGACGggagagttcacagtgcaacagtgaaaACTGTCAATGCTGCCAAGTCGACAGTACATGTGGAGTGGAATGAGAAAGAAGTGACTAAAGGAAAAGAGATTGACCTGAGTGACATCTGTCGTCTCAATGCTGACCTGCTCGAATATCTGCAAGCATCAAACCAAGCAGGACCTTCCACCGCTCCAGCTGCCAACCCTGCACGTGCGCCTAAAGCGGACAAAaaatcaGAGCAACCTACAAAGTCATCAAAGATACCTGCCCCTTCAGAGTTGGCCCCTCCAGCTGGTCCGTCTGAGGAGCCAGTCCCCAGAAGGATGACCACTCGCCAGACTTGTCTGTTTCGACCACCAACCATTCCATCTGCTGGTTTGACTCCTGCTGATGATGCTCCCAGTCAGGAGCAGCCCTCGTCTACTATCCCTAGACCCTCAGGATTACCAAGTTATCCGAGAAGACAAGTTGCTAAACCCCCATCTCCTCTGCTTCCTGCCATTGAAGCTGTGTCAGAAAGTGAGGCCTCAAAATGTGCTCCTGCACCCACTGCAAACCAGCGCCTTTCACGAGTTCCAGAAGTAAATAAGACAACAAACAAAAGGCTGTCCGTGTCGACTAAAAACCCAGAAACCCAGTCCAAGAAAGGAAAGTATGGAGATATGAACCGCCCCAACAAGCAGTTTTACCAGATGATAGAAGAATATCGAGAGACTGTGGAGAAAGTTCCATTGTCTTTGAGTGATCCTGTTGAGCTTCAccgaatctgtgtgtgtgttcgcaaGCGGCCACTAAATAAAAAAGAAATAGCTAAGAAAGAGATTGATGTGGTGACGATCCCTGGAAACGGAGTCCTCCTGTTCCATGAACCCAAGCAGAAAGTCGATCTCACAAAGTACCTTGACAACCAGCCTTTCCACTTTGATTACTCATTTGACGAAGATGCCAGCAATGATTTAGTTTACAGATTCACTGCCAAACCTCTGGTTAAGACTATATTTGAGGGTGGAAGGGCGACATGTTTTGCATATGGTCAGACTGGGAGCGGAAAGACACATACAATGGGTGGAGACTTTTCAGGAAAGGCTCAGAATAGCTCTAAAGGAATCTATGCCTTGGCAGCACAGGATGTGTTTACCCTTCTGCAGCAGAAAAGATATGCCGACCTATGCCCATACGTGACCTTTTTTGAGATCTACAATGGCAAGGTCTTTGACTTGCTGAATAAGAAGGCAAAACTGCGTGTGCTAGAGGATGAAAACCAACAGGTGCAGGTTGTTGGCCTGCAGGAAATGCCTGTCTCATCTGTTGAAGATGTCATAAAGATGATTGAGAAGGGGAGTGCATGCAGAACATCTGGCCAGACGTTTGCCAATGCCAACTCGTCCCGGTCCCATGCCGTCCTGCAGGTTATCCTGAGACGGCATAAGCTGCTTCATGGGAAGTTCTCTCTGGTGGACCTGGCAGGGAATGAGCGGGGCACAGATGTCAGCAGCAATGACCGGCAGACTATGGTGGAGACAGCAGAGATCAATCGCAGTCTTCTGGCATTGAAGGAATGCATCCGATCTCTGGGGCAGAACAGTGAACACATCCCCTTCCGGATGAGCAAGCTCACCCAGGTGCTCCGAGACTCCTTCATAGGCGAGAACTCCAGAACCTGCATGATTGCCATGATCTCACCTGGTATGACCTCTTGTGATtacactctgaacacactacGTTATGCAGACAGGGTGAAGGAGTTGAATGGATTGTCTAAGGGAGCTGCACAGAACACTAAGCTAACAGAGGAGTCAGAGGAGGGCAGCAGTTCCTTAGAGGAGGAGGGTATTCCTGCAGAACTTGAAGTCATGGCCCAGTTCTCTGAAGTGGAGGAGAGGTTCTATGAAGATCTGCAGGGTGGCAGTGAAATTGCCAGAGCGATGGAGCACACATCATATGACATTATAAGCGGTCTACCAGAAATCGATGCATACATGGAAAGACTTCAAGGATCTTACCATGCTCTGCGATCAGCTATTGAGGCACTAAAAGCCAGGTCACCCAATCTGGCATGACATGcaaatggagtggaaaaacCAAATCAAGTAATTTGGTTCTTTTGAATGCTGACTGCTAATGTTCTGTGTTAACACGTTCCCTTGTAAGTTTAATTACAATTTGTTTGGATGTTTATATGTGTTGTGTCGTAAATGTTCTTATTCACCGAATAAATGTTTACTTATAACAGA
>XM_026935924.2
CGTACTTCCGGTTAGATGAACAACTTCCGCTGACGTATTTTGAAAGCTTGGCGGTTGAGAAGTTTTTTGTACATACGACAGGCTTGTTGTGTTGCGCTGGCTGAAGGattgggttttatttttatttttaaaagcttgTGTTTATATTAAGTAGGGTAAAATGGACCCAGCAGCTGCGACGCTTCTTGTTGGACTTGCTGTCAAAATTAGCCGCAGTGACGggagagttcacagtgcaacagtgaaaACTGTCAATGCTGCCAAGTCGACAGTACATGTGGAGTGGAATGAGAAAGAAGTGACTAAAGGAAAAGAGATTGACCTGAGTGACATCTGTCGTCTCAATGCTGACCTGCTCGAATATCTGCAAGCATCAAACCAAGCAGGACCTTCCACCGCTCCAGCTGCCAACCCTGCACGTGCGCCTAAAGCGGACAAAaaatcaGAGCAACCTACAAAGTCATCAAAGATACCTGCCCCTTCAGAGTTCCCCAGAAGGATGACCACTCGCCAGACTTGTCTGTTTCGACCACCAACCATTCCATCTGCTGGTTTGACTCCTGCTGATGATGCTCCCAGTCAGGAGCAGCCCTCGTCTACTATCCCTAGACCCTCAGGATTACCAAGTTATCCGAGAAGACAAGTTGCTAAACCCCCATCTCCTCTGCTTCCTGCCATTGAAGCTGTGTCAGAAAGTGAGGCCTCAAAATGTGCTCCTGCACCCACTGCAAACCAGCGCCTTTCACGAGTTCCAGAAGTAAATAAGACAACAAACAAAAGGCTGTCCGTGTCGACTAAAAACCCAGAAACCCAGTCCAAGAAAGGAAAGTATGGAGATATGAACCGCCCCAACAAGCAGTTTTACCAGATGATAGAAGAATATCGAGAGACTGTGGAGAAAGTTCCATTGTCTTTGAGTGATCCTGTTGAGCTTCAccgaatctgtgtgtgtgttcgcaaGCGGCCACTAAATAAAAAAGAAATAGCTAAGAAAGAGATTGATGTGGTGACGATCCCTGGAAACGGAGTCCTCCTGTTCCATGAACCCAAGCAGAAAGTCGATCTCACAAAGTACCTTGACAACCAGCCTTTCCACTTTGATTACTCATTTGACGAAGATGCCAGCAATGATTTAGTTTACAGATTCACTGCCAAACCTCTGGTTAAGACTATATTTGAGGGTGGAAGGGCGACATGTTTTGCATATGGTCAGACTGGGAGCGGAAAGACACATACAATGGGTGGAGACTTTTCAGGAAAGGCTCAGAATAGCTCTAAAGGAATCTATGCCTTGGCAGCACAGGATGTGTTTACCCTTCTGCAGCAGAAAAGATATGCCGACCTATGCCCATACGTGACCTTTTTTGAGATCTACAATGGCAAGGTCTTTGACTTGCTGAATAAGAAGGCAAAACTGCGTGTGCTAGAGGATGAAAACCAACAGGTGCAGGTTGTTGGCCTGCAGGAAATGCCTGTCTCATCTGTTGAAGATGTCATAAAGATGATTGAGAAGGGGAGTGCATGCAGAACATCTGGCCAGACGTTTGCCAATGCCAACTCGTCCCGGTCCCATGCCGTCCTGCAGGTTATCCTGAGACGGCATAAGCTGCTTCATGGGAAGTTCTCTCTGGTGGACCTGGCAGGGAATGAGCGGGGCACAGATGTCAGCAGCAATGACCGGCAGACTATGGTGGAGACAGCAGAGATCAATCGCAGTCTTCTGGCATTGAAGGAATGCATCCGATCTCTGGGGCAGAACAGTGAACACATCCCCTTCCGGATGAGCAAGCTCACCCAGGTGCTCCGAGACTCCTTCATAGGCGAGAACTCCAGAACCTGCATGATTGCCATGATCTCACCTGGTATGACCTCTTGTGATtacactctgaacacactacGTTATGCAGACAGGGTGAAGGAGTTGAATGGATTGTCTAAGGGAGCTGCACAGAACACTAAGCTAACAGAGGAGTCAGAGGAGGGCAGCAGTTCCTTAGAGGAGGAGGGTATTCCTGCAGAACTTGAAGTCATGGCCCAGTTCTCTGAAGTGGAGGAGAGGTTCTATGAAGATCTGCAGGGTGGCAGTGAAATTGCCAGAGCGATGGAGCACACATCATATGACATTATAAGCGGTCTACCAGAAATCGATGCATACATGGAAAGACTTCAAGGATCTTACCATGCTCTGCGATCAGCTATTGAGGCACTAAAAGCCAGGTCACCCAATCTGGCATGACATGcaaatggagtggaaaaacCAAATCAAGTAATTTGGTTCTTTTGAATGCTGACTGCTAATGTTCTGTGTTAACACGTTCCCTTGTAAGTTTAATTACAATTTGTTTGGATGTTTATATGTGTTGTGTCGTAAATGTTCTTATTCACCGAATAAATGTTTACTTATAACAGA
>XR_003403979.2
TCGTACTTCCGGTTAGATGAACAACTTCCGCTGACGTATTTTGAAAGCTTGGCGGTTGAGAAGTTTTTTGTACATACGACAGGCTTGTTGTGTTGCGCTGGCTGAAGGattgggttttatttttatttttaaaagcttgTGTTTATATTAAGTAGGGTAAAATGGACCCAGCAGCTGCGACGCTTCTTGTTGGACTTGCTGTCAAAATTAGCCGCAGTGACGggagagttcacagtgcaacagtgaaaACTGTCAATGCTGCCAAGTCGACAGTACATGTGGAGTGGAATGAGAAAGAAGTGACTAAAGGAAAAGAGATTGACCTGAGTGACATCTGTCGTCTCAATGCTGACCTGCTCGAATATCTGCAAGCATCAAACCAAGCAGGACCTTCCACCGCTCCAGCTGCCAACCCTGCACGTGCGCCTAAAGCGGACAAAaaatcaGAGCAACCTACAAAGTCATCAAAGATACCTGCCCCTTCAGAGTTGGCCCCTCCAGCTGGTCCGTCTGAGGAGCCAGTCCCCAGAAGGATGACCACTCGCCAGACTTGTCTGTTTCGACCACCAACCATTCCATCTGCTGGTTTGACTCCTGCTGATGATGCTCCCAGTCAGGAGCAGCCCTCGTCTACTATCCCTAGACCCTCAGGATTACCAAGTTATCCGAGAAGACAAGTTGCTAAACCCCCATCTCCTCTGCTTCCTGCCATTGAAGCTGTGTCAGAAAGTGAGGCCTCAAAATGTGCTCCTGCACCCACTGCAAACCAGCGCCTTTCACGAGTTCCAGAAGTAAATAAGACAACAAACAAAAGGCTGTCCGTGTCGACTAAAAACCCAGAAACCCAGTCCAAGAAAGGAAAGTATGGAGATATGAACCGCCCCAACAAGCAGTTTTACCAGATGATAGAAGAATATCGAGAGACTGTGGAGAAAGTTCCATTGTCTTTGAGTGATCCTGTTGAGCTTCAccgaatctgtgtgtgtgttcgcaaGCGGCCACTAAATAAAAAAGAAATAGCTAAGAAAGAGATTGATGTGGTGACGATCCCTGGAAACGGAGTCCTCCTGTTCCATGAACCCAAGCAGAAAGTCGATCTCACAAAGTACCTTGACAACCAGCCTTTCCACTTTGATTACTCATTTGACGAAGATGCCAGCAATGATTTAGTTTACAGATTCACTGCCAAACCTCTGGTTAAGACTATATTTGAGGGTGGAAGGGCGACATGTTTTGCATATGGTCAGACTGGGAGCGGAAAGACACATACAATGGGTGGAGACTTTTCAGGAAAGGCTCAGAATAGCTCTAAAGGAATCTATGCCTTGGCAGCACAGGATGTGTTTACCCTTCTGCAGCAGAAAAGATATGCCGACCTATGCCCATACGTGACCTTTTTTGAGATCTACAATGGCAAGGTCTTTGACTTGCTGAATAAGAAGGCAAAACTGCGTGTGCTAGAGGATGAAAACCAACAGGTGCAGGTTGTTGGCCTGCAGGAAATGCCTGTCTCATCTGTTGAAGATGTCATAAAGATGATTGAGAAGGGGAGTGCATGCAGAACATCTGGCCAGACGTTTGCCAATGCCAACTCGTCCCGGTCCCATGCCGTCCTGCAGGTTATCCTGAGACGGCATAAGCTGCTTCATGGGAAGTTCTCTCTGGTGGACCTGGCAGGGAATGAGCGGGGCACAGATGTCAGCAGCAATGACCGGCAGACTATGGTGGAGACAGCAGAGATCAATCGCAGTCTTCTGGCATTGAAGGAATGCATCCGATCTCTGGGGCAGAACAGTGAACACATCCCCTTCCGGATGAGCAAGCTCACCCAGGTGCTCCGAGACTCCTTCATAGGCGAGAACTCCAGAACCTGCATGATTGCCATGATCTCACCTGGTATGACCTCTTGTGATtacactctgaacacactacGTTATGCAGACAGGGTGAAGGAGTTGAATGGATTGTCTAAGGGAGCTGCACAGAACACTAAGCTAACAGAGGAGTCAGAGGAGGGCAGCAGTTCCTTAGAGGAGGAGGGTATTCCTGCAGAACTTGAAGTCATGGCCCAGTTCTCTGAAGTGGAGGAGAGGTTCTATGAAGATCTGCAGGGTGGCAGTGAAATTGCCAGAGCGATGGAGCACACATCATATGACATTATAAGCGGTCTACCAGAAATCGATGCATACATGGAAAGACTTCAAGGATCTTACCATGCTCTGCGATCAGCTATTGAGGCACTAAAAGCCAGGTCACCCAATCTGGCATGACATGcaaatggagtggaaaaacCAAATCAAGTAATTTGGTTCTTTTGAATGCTGACTGCTAATGTTCTGTGTTAACACGTTCCCTTGGTGaggaataaaattata

Function

symbol description
kif2c Predicted to enable ATP hydrolysis activity; microtubule binding activity; and microtubule motor activity. Predicted to be involved in microtubule-based movement. Predicted to be part of kinesin complex. Predicted to be active in centrosome; microtubule; and spindle. Orthologous to human KIF2C (kinesin family member 2C).

NR:

description
PREDICTED: kinesin-like protein KIF2C isoform X1

GO:

id name namespace
GO:0007018 microtubule-based movement biological_process
GO:0005871 kinesin complex cellular_component
GO:0005874 microtubule cellular_component
GO:0005524 ATP binding molecular_function
GO:0003777 microtubule motor activity molecular_function
GO:0008017 microtubule binding molecular_function

KEGG:

id description
K10393 KIF2_24, MCAK; kinesin family member 2/24

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026935923.2 True 2444 mRNA 0.47 22 24859026 24871164
XM_026935924.2 False 2410 mRNA 0.47 21 24859027 24871164
XR_003403979.2 False 2375 misc_RNA 0.47 23 24859026 24871263

Neighbor

gene id symbol gene type direction distance location
kiss1ra kiss1ra,LOC108267265,LOC108411985,LOC107657423,LOC107599909 coding upstream 51622 24792295 ~ 24807404 (+)
zgc:113531 LOC108267389,LOC108430294,LOC106532842,LOC105940236,LOC107081705 coding upstream 261917 24587207 ~ 24597109 (+)
slc6a9 slc6a9,LOC107739827,LOC107730788,LOC107657455,LOC107700995,LOC107557089,LOC107599892 coding upstream 297748 24507205 ~ 24561278 (+)
klf17 LOC108267392 coding upstream 380222 24476189 ~ 24478804 (+)
rnf220a rnf220,rnf220a,LOC107557077 coding upstream 449729 24294636 ~ 24409297 (+)
klhl20 klhl20,LOC106569069 coding downstream 123614 24994877 ~ 25013306 (+)
dars2 dars2,LOC107658301,LOC104960769,LOC104948518 coding downstream 150350 25021613 ~ 25047317 (+)
astn1 astn1 coding downstream 398959 25270222 ~ 25552839 (+)
cop1 rfwd2,LOC107722073,LOC107726924 coding downstream 772139 25643402 ~ 25664410 (+)
mrps14 mrps14,LOC107678929,LOC107726917,LOC107559053,LOC107563590 coding downstream 1079891 25951154 ~ 25953899 (+)
LOC113540553 NA non-coding upstream 9539 24839221 ~ 24849487 (+)
G70204 NA non-coding upstream 109113 24681981 ~ 24749913 (+)
G70142 NA non-coding upstream 273119 24585427 ~ 24585907 (+)
G70140 NA non-coding upstream 274187 24584614 ~ 24584839 (+)
G70139 NA non-coding upstream 275650 24583176 ~ 24583376 (+)
G70520 NA non-coding downstream 126653 24997916 ~ 24998225 (+)
LOC117597084 NA non-coding downstream 456955 25328218 ~ 25330540 (+)
G70695 NA non-coding downstream 685574 25556837 ~ 25557761 (+)
G70763 LOC107732307 non-coding downstream 687164 25558427 ~ 25561346 (+)
G70778 NA non-coding downstream 714063 25585326 ~ 25585534 (+)
G69971 NA other upstream 749137 24108795 ~ 24109889 (+)
klhl18 klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 other upstream 752803 24028106 ~ 24106223 (+)
G69509 LOC108267411 other upstream 1538683 23318504 ~ 23320343 (+)
LOC113540463 NA other upstream 2206579 22649810 ~ 22652447 (+)
LOC113540377 NA other upstream 3096725 21752416 ~ 21762301 (+)
tnr tnr other downstream 836564 25707827 ~ 25881110 (+)
LOC113539772 kiaa0040 other downstream 1025754 25897017 ~ 25902006 (+)
LOC117597118 LOC108261462,LOC108261092,LOC108261095 other downstream 1344801 26216064 ~ 26224038 (+)
G71385 NA other downstream 1357501 26228764 ~ 26229191 (+)
zgc:66427 zgc:66427,LOC108267510,LOC107738154,LOC101067737,LOC107100876,LOC103396713,LOC104950485,LOC107659393,LOC107668973,LOC107706368,LOC107557724,LOC107591360 other downstream 1417027 26288290 ~ 26292784 (+)

Expression


Co-expression Network