epoa (epo)


Basic Information

Item Value
gene id epoa
gene name epo
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 12718253 ~ 12733478 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936008.2
AGCTGCCTGCAATACCCAAATGGCTTAAATCATCCAAAGGTGTGTAGCTATGGATGTAACTGGACACAAGGAGAGGTCCAACACTGTAAAGAGATCTGCTGGACTCTTTGCCTTGCTGCTGATCGTACTGGAGTGGATTCGGCCTGGCCTGCCCTCCCCTTTGCGGCCCATCTGTGATCTGCGTGTTCTCAACCACTTCATTAAGGAGGCGCGGGATGCTGAGGCTGCTATGAAGTTTTGTAAAGAGGAATGCAGTATTGCTGTACCTCTCACAGTTCCTCTGACCAGAGTGGATTTCGATGtgtgggaaaagaaaaatACAGAGGAGCAGGCTCAAGAAGTCCAGACAGGACTATGGCTGTTAAACATGGCCATCAGCTCAGTTGGTGCATCCATCACCAACTCTGCACTTCACTCTCACATAGACGCCAGCGTCAGAAATATCGCCAGCCTCAAGCAGGTGTTGCGCAGCCTCAGTATACAGgACTATGTGCCTACAGTTGGTGGGACAGAGGAGACATGGAGAGTGTCTTCAGCCTCAGAGCTCTTCCAGGTCCACATCAACTTCCTGCGTGGGAAAGTGCGCCTTTTGCTCGCCAATGCACCTGTCTGCCAGCAACATGTCAGATGATTGGAGCATGGACAGGACAGGAACCCAACTGATTGGAGCAGACCATAATAGAAGGCAGGACATTAGTACTAAACTGTCAAGGCCATCGTGCTTACCTGCATGGAGCACTTTCTAACCATCAATGAAGATTGGAACAAAATATTTATCTTCAAGAACACTAGATGGCTTTAGGATGTAGTTCTCTTCACCGCTGCCCCGACCAACGCTGCACACTTTTCTGTATGTGATGCAGCCTGTCACTCCTTTCTCCCCATTTGACTGACATTTGTTATACTGCAGATGCACCTGCATCAACCCTAATCAGATACcacttttaataatttttttacaatgtatttgtgttgattttatgatgcttaatatttatatagattTCTACAACCTGGATTATGGGTCATGCTATAAATTTTGAGTATGAAGCCGCCTGCTTTCTGTCTTAGCCTTTAACACCTCTAAAGATTGACTTGCTGcttttaagtcatatttatcATTCTCAGTAATGCACTGATTTTAtatagattgtgtgtgtgtgagtgagtgagtgagtgagtgagtgagtgaaaataaGTGGTTTGGAGAATGTGTTTGTACGAGAGTGAGTGAATATGAGTTTatggggaatgtgtgtgtgagagagatgggGATATCAGTGGACAGACTGTTTACAGGTCACTTCTGGTGATAGGAAGAGAGACCAAATAGTTACGCTTTTGGGGGGAAACTGGGGGGGTTATGTGAGGGCTGATGAGACTATGTGTTGATTATAAGCGTCTGCACTGGATTCACGTGCACAGCACCGCACAGAGAACGGCCAGGAAAAATATTGCGTCACTGCCAGGAAAAAATATTGATTGGTTTGCATGAAGAACATCCTGCCTGACTCCTGCTCTGTTCACAGTCTGGTGTAATGGCCTGGGAAACTTTTGGGTAGTTGACATTTGTCTactgtttctctttgtgttcCAGGCTCTGTTGGTCATTCTTGTTTGTCGTCTCTGTCTTCTTTTTAACAATGTTTTCGCTATGGGGTTCATTTTTGACGtttgtgaatcagtgtgtgaatgtaaagaAGGAAGTTTGTAATACTACTTTCCTGTTTGTTACTGTTGTTTGCTTCTTTTACCACTTGTCCTATTTggttaataaaatgcaaaatattattCTGAGAAGTAGTTGAAGGAAA
>XM_026936009.2
AGCTGCCTGCAATACCCAAATGGCTTAAATCATCCAAAGGTGTGTAGCTATGGATGTAACTGGACACAAGGAGAGGTCCAACACTGTAAAGAGATCTGCTGGACTCTTTGCCTTGCTGCTGATCGTACTGGAGTGGATTCGGCCTGGCCTGCCCTCCCCTTTGCGGCCCATCTGTGATCTGCGTGTTCTCAACCACTTCATTAAGGAGGCGCGGGATGCTGAGGCTGCTATGTTTTGTAAAGAGGAATGCAGTATTGCTGTACCTCTCACAGTTCCTCTGACCAGAGTGGATTTCGATGtgtgggaaaagaaaaatACAGAGGAGCAGGCTCAAGAAGTCCAGACAGGACTATGGCTGTTAAACATGGCCATCAGCTCAGTTGGTGCATCCATCACCAACTCTGCACTTCACTCTCACATAGACGCCAGCGTCAGAAATATCGCCAGCCTCAAGCAGGTGTTGCGCAGCCTCAGTATACAGgACTATGTGCCTACAGTTGGTGGGACAGAGGAGACATGGAGAGTGTCTTCAGCCTCAGAGCTCTTCCAGGTCCACATCAACTTCCTGCGTGGGAAAGTGCGCCTTTTGCTCGCCAATGCACCTGTCTGCCAGCAACATGTCAGATGATTGGAGCATGGACAGGACAGGAACCCAACTGATTGGAGCAGACCATAATAGAAGGCAGGACATTAGTACTAAACTGTCAAGGCCATCGTGCTTACCTGCATGGAGCACTTTCTAACCATCAATGAAGATTGGAACAAAATATTTATCTTCAAGAACACTAGATGGCTTTAGGATGTAGTTCTCTTCACCGCTGCCCCGACCAACGCTGCACACTTTTCTGTATGTGATGCAGCCTGTCACTCCTTTCTCCCCATTTGACTGACATTTGTTATACTGCAGATGCACCTGCATCAACCCTAATCAGATACcacttttaataatttttttacaatgtatttgtgttgattttatgatgcttaatatttatatagattTCTACAACCTGGATTATGGGTCATGCTATAAATTTTGAGTATGAAGCCGCCTGCTTTCTGTCTTAGCCTTTAACACCTCTAAAGATTGACTTGCTGcttttaagtcatatttatcATTCTCAGTAATGCACTGATTTTAtatagattgtgtgtgtgtgagtgagtgagtgagtgagtgagtgagtgaaaataaGTGGTTTGGAGAATGTGTTTGTACGAGAGTGAGTGAATATGAGTTTatggggaatgtgtgtgtgagagagatgggGATATCAGTGGACAGACTGTTTACAGGTCACTTCTGGTGATAGGAAGAGAGACCAAATAGTTACGCTTTTGGGGGGAAACTGGGGGGGTTATGTGAGGGCTGATGAGACTATGTGTTGATTATAAGCGTCTGCACTGGATTCACGTGCACAGCACCGCACAGAGAACGGCCAGGAAAAATATTGCGTCACTGCCAGGAAAAAATATTGATTGGTTTGCATGAAGAACATCCTGCCTGACTCCTGCTCTGTTCACAGTCTGGTGTAATGGCCTGGGAAACTTTTGGGTAGTTGACATTTGTCTactgtttctctttgtgttcCAGGCTCTGTTGGTCATTCTTGTTTGTCGTCTCTGTCTTCTTTTTAACAATGTTTTCGCTATGGGGTTCATTTTTGACGtttgtgaatcagtgtgtgaatgtaaagaAGGAAGTTTGTAATACTACTTTCCTGTTTGTTACTGTTGTTTGCTTCTTTTACCACTTGTCCTATTTggttaataaaatgcaaaatattattCTGAGAAGTAGTTGAAGGAAA
>XM_026936010.2
TGTCTTTATCAGTAGCTGGAGGTGAAGGTCAGCCTGCTGGCTGCCTGTATAGTGATGTAGAGGCAGACAGGCAGCAGATCAGATCAGCACTTCTGCAggctctccacacacacacactctctctatctctctcacactctcactctctggctctctctctctctctctgcctatcTGTCACAGAGCTTGAAGCTTTGGGGACACATGTCTTTTCCCCAAGCAGTTAACGTTAGCTGTTTATCATTTGAAGACttgatttgtttttcatcatGTGTTTGAAAAATGCTGGGGTGCTTCGCGAATGGTTTACTGCACAGGACTCTTTGCCTTGCTGCTGATCGTACTGGAGTGGATTCGGCCTGGCCTGCCCTCCCCTTTGCGGCCCATCTGTGATCTGCGTGTTCTCAACCACTTCATTAAGGAGGCGCGGGATGCTGAGGCTGCTATGAAGTTTTGTAAAGAGGAATGCAGTATTGCTGTACCTCTCACAGTTCCTCTGACCAGAGTGGATTTCGATGtgtgggaaaagaaaaatACAGAGGAGCAGGCTCAAGAAGTCCAGACAGGACTATGGCTGTTAAACATGGCCATCAGCTCAGTTGGTGCATCCATCACCAACTCTGCACTTCACTCTCACATAGACGCCAGCGTCAGAAATATCGCCAGCCTCAAGCAGGTGTTGCGCAGCCTCAGTATACAGgACTATGTGCCTACAGTTGGTGGGACAGAGGAGACATGGAGAGTGTCTTCAGCCTCAGAGCTCTTCCAGGTCCACATCAACTTCCTGCGTGGGAAAGTGCGCCTTTTGCTCGCCAATGCACCTGTCTGCCAGCAACATGTCAGATGATTGGAGCATGGACAGGACAGGAACCCAACTGATTGGAGCAGACCATAATAGAAGGCAGGACATTAGTACTAAACTGTCAAGGCCATCGTGCTTACCTGCATGGAGCACTTTCTAACCATCAATGAAGATTGGAACAAAATATTTATCTTCAAGAACACTAGATGGCTTTAGGATGTAGTTCTCTTCACCGCTGCCCCGACCAACGCTGCACACTTTTCTGTATGTGATGCAGCCTGTCACTCCTTTCTCCCCATTTGACTGACATTTGTTATACTGCAGATGCACCTGCATCAACCCTAATCAGATACcacttttaataatttttttacaatgtatttgtgttgattttatgatgcttaatatttatatagattTCTACAACCTGGATTATGGGTCATGCTATAAATTTTGAGTATGAAGCCGCCTGCTTTCTGTCTTAGCCTTTAACACCTCTAAAGATTGACTTGCTGcttttaagtcatatttatcATTCTCAGTAATGCACTGATTTTAtatagattgtgtgtgtgtgagtgagtgagtgagtgagtgagtgagtgaaaataaGTGGTTTGGAGAATGTGTTTGTACGAGAGTGAGTGAATATGAGTTTatggggaatgtgtgtgtgagagagatgggGATATCAGTGGACAGACTGTTTACAGGTCACTTCTGGTGATAGGAAGAGAGACCAAATAGTTACGCTTTTGGGGGGAAACTGGGGGGGTTATGTGAGGGCTGATGAGACTATGTGTTGATTATAAGCGTCTGCACTGGATTCACGTGCACAGCACCGCACAGAGAACGGCCAGGAAAAATATTGCGTCACTGCCAGGAAAAAATATTGATTGGTTTGCATGAAGAACATCCTGCCTGACTCCTGCTCTGTTCACAGTCTGGTGTAATGGCCTGGGAAACTTTTGGGTAGTTGACATTTGTCTactgtttctctttgtgttcCAGGCTCTGTTGGTCATTCTTGTTTGTCGTCTCTGTCTTCTTTTTAACAATGTTTTCGCTATGGGGTTCATTTTTGACGtttgtgaatcagtgtgtgaatgtaaagaAGGAAGTTTGTAATACTACTTTCCTGTTTGTTACTGTTGTTTGCTTCTTTTACCACTTGTCCTATTTggttaataaaatgcaaaatattattCTGAGAAGTAGTTGAAGGAAA
>XM_026936011.2
CTCTGCCGGCATCCATCAGCGTAGTTTATCCGTCTCATCCGATCTGTGGGGTTTAAGCGTCGACAATATTGTGAGAGATATATGCTTGATTATTGCTATTAGGCCTATTTGTTTGCAATGTCACCCTTCATATGGAAGTCAGCCAAGATGAAAATACATAATCAGAGGATGAATTGGTCAGAGAGGAAACATTTTTAGGGTTATTTAGGCTACCTCATTGGACTGTTGCGTAAAAATACATGCTGTGTGAcaacaatgaaagaaaaacagtctTTCCAAACAGGAAGTAGGCTAGTTCAGAAACCCTTTCCAACCAATTGCACAGTCAAAGCTAGAAAAAAGTCAAACGGATGCCCCAGGATAAGTGCGAACTCAATGACAGTTCTGTTAAAGCGCTTCACTTGCAATTAATGGGCAATAGACGGGACTGCGGCCAATGCGACGAGGATCCTGCAAGAGATTATGCAAATTCTTAGATGGAGATGCCCAGACTCTTTGCCTTGCTGCTGATCGTACTGGAGTGGATTCGGCCTGGCCTGCCCTCCCCTTTGCGGCCCATCTGTGATCTGCGTGTTCTCAACCACTTCATTAAGGAGGCGCGGGATGCTGAGGCTGCTATGAAGTTTTGTAAAGAGGAATGCAGTATTGCTGTACCTCTCACAGTTCCTCTGACCAGAGTGGATTTCGATGtgtgggaaaagaaaaatACAGAGGAGCAGGCTCAAGAAGTCCAGACAGGACTATGGCTGTTAAACATGGCCATCAGCTCAGTTGGTGCATCCATCACCAACTCTGCACTTCACTCTCACATAGACGCCAGCGTCAGAAATATCGCCAGCCTCAAGCAGGTGTTGCGCAGCCTCAGTATACAGgACTATGTGCCTACAGTTGGTGGGACAGAGGAGACATGGAGAGTGTCTTCAGCCTCAGAGCTCTTCCAGGTCCACATCAACTTCCTGCGTGGGAAAGTGCGCCTTTTGCTCGCCAATGCACCTGTCTGCCAGCAACATGTCAGATGATTGGAGCATGGACAGGACAGGAACCCAACTGATTGGAGCAGACCATAATAGAAGGCAGGACATTAGTACTAAACTGTCAAGGCCATCGTGCTTACCTGCATGGAGCACTTTCTAACCATCAATGAAGATTGGAACAAAATATTTATCTTCAAGAACACTAGATGGCTTTAGGATGTAGTTCTCTTCACCGCTGCCCCGACCAACGCTGCACACTTTTCTGTATGTGATGCAGCCTGTCACTCCTTTCTCCCCATTTGACTGACATTTGTTATACTGCAGATGCACCTGCATCAACCCTAATCAGATACcacttttaataatttttttacaatgtatttgtgttgattttatgatgcttaatatttatatagattTCTACAACCTGGATTATGGGTCATGCTATAAATTTTGAGTATGAAGCCGCCTGCTTTCTGTCTTAGCCTTTAACACCTCTAAAGATTGACTTGCTGcttttaagtcatatttatcATTCTCAGTAATGCACTGATTTTAtatagattgtgtgtgtgtgagtgagtgagtgagtgagtgagtgagtgaaaataaGTGGTTTGGAGAATGTGTTTGTACGAGAGTGAGTGAATATGAGTTTatggggaatgtgtgtgtgagagagatgggGATATCAGTGGACAGACTGTTTACAGGTCACTTCTGGTGATAGGAAGAGAGACCAAATAGTTACGCTTTTGGGGGGAAACTGGGGGGGTTATGTGAGGGCTGATGAGACTATGTGTTGATTATAAGCGTCTGCACTGGATTCACGTGCACAGCACCGCACAGAGAACGGCCAGGAAAAATATTGCGTCACTGCCAGGAAAAAATATTGATTGGTTTGCATGAAGAACATCCTGCCTGACTCCTGCTCTGTTCACAGTCTGGTGTAATGGCCTGGGAAACTTTTGGGTAGTTGACATTTGTCTactgtttctctttgtgttcCAGGCTCTGTTGGTCATTCTTGTTTGTCGTCTCTGTCTTCTTTTTAACAATGTTTTCGCTATGGGGTTCATTTTTGACGtttgtgaatcagtgtgtgaatgtaaagaAGGAAGTTTGTAATACTACTTTCCTGTTTGTTACTGTTGTTTGCTTCTTTTACCACTTGTCCTATTTggttaataaaatgcaaaatattattCTGAGAAGTAGTTGAAGGAAA

Function

symbol description
epo Enables cytokine activity and erythropoietin receptor binding activity. Involved in several processes, including negative regulation of apoptotic process; negative regulation of ion transport; and regulation of transcription, DNA-templated. Located in cell surface and extracellular space. Implicated in several diseases, including artery disease (multiple); diabetic angiopathy; familial erythrocytosis 5; ischemia (multiple); and neurodegenerative disease (multiple). Biomarker of amyotrophic lateral sclerosis; anemia; breast cancer; eye disease (multiple); and glucose metabolism disease (multiple).

NR:

description
erythropoietin-like isoform X2

GO:

id name namespace
GO:0014823 response to activity biological_process
GO:0043249 erythrocyte maturation biological_process
GO:0048471 perinuclear region of cytoplasm cellular_component
GO:0005576 extracellular region cellular_component
GO:0005128 erythropoietin receptor binding molecular_function
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05437 EPO; erythropoietin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936008.2 False 1814 mRNA 0.44 5 12718253 12733478
XM_026936009.2 False 1811 mRNA 0.44 5 12718253 12733478
XM_026936010.2 False 2030 mRNA 0.44 5 12727284 12733478
XM_026936011.2 True 2202 mRNA 0.44 5 12726741 12733478

Neighbor

gene id symbol gene type direction distance location
LOC113540507 LOC108267598 coding upstream 1521 12712841 ~ 12716732 (+)
nlgn2a nlgn2,nlgn2a,LOC103033407,LOC107564776,LOC107753966,LOC107659731,LOC107750775,LOC107664280 coding upstream 47712 12508874 ~ 12670541 (+)
tifa tifa,LOC100304890 coding upstream 511378 12198342 ~ 12206875 (+)
tnfsf10l LOC108268320,LOC108410411,LOC103041464,LOC107691962,LOC107562848,LOC107742295,LOC107753950 coding upstream 595650 12099805 ~ 12122603 (+)
si:dkey-171c9.3 LOC108268329 coding upstream 625200 12086179 ~ 12093053 (+)
gigyf1a gigyf1 coding downstream 8779 12742257 ~ 12767904 (+)
wrap53 wrap53 coding downstream 43699 12777177 ~ 12788225 (+)
efnb3b efnb3,efnb3b,LOC107597046,LOC106577756 coding downstream 62463 12795941 ~ 12861217 (+)
serpinh2 LOC108267141,LOC108412061 coding downstream 217591 12951069 ~ 12976437 (+)
dnah2 dnah2 coding downstream 247371 12980849 ~ 13115167 (+)
G63242 NA non-coding upstream 360005 12357832 ~ 12358248 (+)
G63241 NA non-coding upstream 360572 12355550 ~ 12357681 (+)
G63137 si:dkey-165a24.9,LOC108267153,LOC108434867,LOC107572570,LOC107753961,LOC107659726,LOC107588125 non-coding upstream 468465 12248663 ~ 12249788 (+)
G63061 NA non-coding upstream 714030 12003990 ~ 12004223 (+)
G62983 NA non-coding upstream 780494 11934829 ~ 11937759 (+)
LOC113540557 NA non-coding downstream 35107 12768585 ~ 12772822 (+)
G63547 NA non-coding downstream 68416 12801894 ~ 12834330 (+)
LOC117596991 NA non-coding downstream 189392 12922870 ~ 12926987 (+)
G63685 NA non-coding downstream 385990 13119468 ~ 13119677 (+)
G63696 NA non-coding downstream 402181 13135659 ~ 13135860 (+)
si:dkey-112a7.4 LOC108268066 other upstream 423120 12292491 ~ 12295133 (+)
si:ch211-200p22.4 LOC108267499,LOC108434851 other upstream 1012917 11644901 ~ 11705336 (+)
LOC117596972 LOC108267738,LOC108267932,LOC108267931,LOC108267739,LOC108267937,LOC108261673,LOC108267938,LOC108267933,LOC108267935,LOC108267740 other upstream 1113023 11590715 ~ 11605230 (+)
c4h4orf48 c7h4orf48 other upstream 2054842 10657357 ~ 10663411 (+)
trnak-cuu_19 NA other upstream 2222783 10495398 ~ 10495470 (+)
tmem88b tmem88,bcl6b,LOC108267673 other downstream 473179 13206657 ~ 13219859 (+)
slc16a13 slc16a13 other downstream 541984 13275462 ~ 13285834 (+)
G63903 NA other downstream 684899 13418377 ~ 13418696 (+)
LOC113539889 LOC108267838 other downstream 735074 13468552 ~ 13475037 (+)
cited1 cited1 other downstream 825145 13558623 ~ 13562266 (+)

Expression


Co-expression Network