cdc14aa (LOC108267888,LOC108411489)


Basic Information

Item Value
gene id cdc14aa
gene name LOC108267888,LOC108411489
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29732265 ~ 29748113 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936015.2
TTCTTCGCGCGACCCACGGACATGGGGCACGCGGTTGCTAAGAGACGGCGTTTTCGCATACTAACGCACTAAATAGTATTTGAGCATAGTGCGCTCGCGTGCGGGTTTGGCGTACTACTTAGTGCTGTAGTATGTAGGGTTTAACATAGCTTCAGCCACGTCCCATTAAAGTCCAGGGGAAGTTTAATACGTTGCGTGGGAGAAAATAAAACTTTGTTAGGAAGTAATTTCGTTTTGGAGTGTAAACACTTTTTCAGGTGGAATGTAAACTTCTGGACTCGACATGGAACTGGTTTTGAGGGACCTGGAAATCCACgttttcagtgtttatatatatatatcgtagATATTGAATGCAATGGCGCATGAAAACGGCATTTCCGGAGCCACGGAGTTGATTAAAGatCGATTATACTTTGCAACTCTCCGTGGAAAACCGAAAAGTACACAGAACGCGCACTACTTCTGCACAGACGATGAGTTTGTCTATGAAAACTTCTACGCAGACTTCGGCCCTCTCAATCTGGCCATGCTGTATCGATACTGCTGTAAACTGAACAAAAAGCTCAAGTCTTTCACTCTTTCCAGGAAGCGCATCATTCATTACACCAGCTACGACCAGCACAAGAGAGCCAACGCCGCCTTCCTGATCGGCGCCTACGCTGTAATATACTTAAAGAGAACTCCAGAGGAAGTCTACCGAGCCCTGATATCTGGGACTAACGTGTCCTACCTGCCCTTCAGAGACGCTGGCTTTGGGAACTGCACCTACAACCTCACCATCTTAGACTGTTTACAAGGAATCCGTAAGGCCCTGCAGCACGGGTTCTTCGACTTTGAGACGTTTGACGTTGAGGAGTACGAGCACTATGAGcGCGTAGAAAATGGTGACTTTAACTGGATTGTGCCAGGGAAGCTGCTGGCCTTCAGCGGGCCTCATCCCAAGAGCAAAATCGAGAATGGATTCCCTCTCCACGCCCCCGAAGCGTACTTCCCCTACTTCCGCCAGCACAATATCAGCGACGTGGTCCGGCTCAACAGGAAGATGTACGAGGGATGCCGTTTTACAGACGCCGGCTTTGCGCATCACGATCTGTTCTTCGTGGACGGCGGCACGCCGAGCGACATCATCATCCGCCGCTTCCTGCACATCTGCGAAACTGCCGAGGGCGCCGTCGCCGTCCACTGTAAAGctggccTGGGCAGGACAGGCACCCTGATTGGCTGCTACCTCATGAAGCATTACCGCTTCACGGCTGCAGAGGCCATCGCCTGGATTCGCATCTGCAGGCCCGGCTCGGTCATCGGCCCCCAGCAGAACTTTCTGGAAGAAAAACAGCACAGcatgtggatggatggagattTGTACCGGTCCAAGCAGCCGAGGCCGCGGCAGTTCCCGGAGAGAGACCTGGCTCACCTCATCTCCAGCCTGGACGACGTTTCGCTCAGCAGCACCAGCCTGAACGCCCAGAGCATCGACGAGAATGACCTCATGGACAATAATATGGGCTTAACTCAGGGAGACAGACTGCGAGCATTAAAGTGTCGACGTCCTCTCAGGTCTCCGTCCACTCTCAGtGGGTTACGTCCGATACCTGGCACCATTTCTCCCTCAAAGTCTTCCAAAGCTCCTCCTCTTTTCTCTGGCGGCCCTGTAACGAGGAGACAGGCTCGAAGCCCCTCGTCCGCTGCAAACATGAAGAGCTTTAAACCCGGCTTGGCCCGCTCTCTCGGCAACCTTTACAGCCTGGACGACTTCGCAGACGAGGAAGGCGACACGTCCGCGCCGTCCTACCCCTCCCCTCCTCCTGCACCATTCTCTCCATCTTCACACCTCTCCTCCGGCCCTCCTCCACCCCGCTTCGGCTTCGGATACCCCATCCCGAATTTCCAACAGGAAGTTAACAACAACCTCAACAATCCTCCTGCTCCTGCGCTCAGGCCTGCGATGAGAGGAACCTTCAGGCCAAACCCCAGACTTCCTGTTCCAGGCGTGCTCACAGGCCGCCATCTTAGTCGCTCTATTCCTTCCCTTCAGTCTGAGTATGTTAAGTACTAACGCCGCAGTGATGCACTGAATCGTCGACTGGAAGAAAATCTCTTCAACAAAATGTCTACTAAATGTCTCACGGACCGTTAGGTTCAGCAGGCATGATGGCAACGTGCTaaggcaaacaaataaatcaatggTTCACtggttttcattttcaaaacctCTTGATGTTCTTTAACTTTATATGcacttcttttcattttcagctttttttttagtctcagaatacatttaatatgtttGAGGTTTTCTCACGCTCAAGCTGAGTATTTGTTTTTCTGACTGAAGGCtcttgagttttttttacacagaccTCTTCTCAGGGCAGAAACAAATGCGGTCAGTTATGTGCGATTAATCAGATGGTGAGGAAGAGGGATTTTGGATgcctttaggttttttttttctttttattcctgatatttttatgtattttattttaaacacagctaTATAGAAGCTAGAAATATCCAACAATGAACATAAACCATTTTCTACTTCAAAATTGAAGAGTCCCATTGCTTTCTAGTTTTCAAATGAGCCActttatcttcttcttcttctttttcagtttattgTAGATAATGTTCCCCGCTATATGAGCGCTGCCATGTTTAGATCATGTGACCACAGGGGTGGTCTAAGAAGGAAATCTACTCAGTCATCGGCTGCTGTTCTCCTACTAATAACATAGTGAAGTGTGTCATTATATAAAAGAGAAAATCATCACAGACGCTCGCAGGCGCACGTTATCAACTTTATCTTTGGCGTATTTCTATGATCACGATCACGTCTACTCACGTCTGGTCTGAGCAAGAGTGTGTACATTTCAGCACAAACCGTTTTAACAACCTGAAAAGTGCTCGATTTCTAGTTAAATAGTCTAAATCACTGTTTGGAATGCTGaatctgatcagtcagaaaGACGTTGATGAATTTTAGTGAGAGTAGTGCCGGCTAGTttgctcattcacagagacttgtatgttTGGTGATTTTAGGAAACATTCAGGACGTTTTCcatcatgggaaagtcttcaataCACAAGAGTTTTACAGTTTCttcgtaacatgacaagctacattttttttaaacttattaacttcaagagagaggaaaagagaagctCTTGACGGaatgagtgatttttttaactgttaaaacgtatgtgagaacaggaatgaatttgttccacaacattaaatgtaactataaatggttaaaaagcatgatatgTCTTCCTTTTGTCGTCGTTGGCAAACtaatgtggtataagaggaataaaacacttcaggatgtgctgtgtAGTATAGACAGTGGTACAaaccataataataaatgcataataaaaacatcaataattataatcaagcacacacacacacacacacacacacacaaggagctTGTATGAAGGTACTGCAGTGAGAAATGCAACTAAGTTTCAGAAAAACAAGATTCTgtcttttctttggttttagcTGCAGGAATAATTTTGATTCTTTCTGCCCAAAAATGAGGTTTAGACTAAATAAAACTCCAATGAGCTGTAAGATGgcaggttttttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggacgcacGCCTGCATGACACGTGACTCTCACGTATTTTGTTACGACACTGTAAAGACATTCTGATTCGTACAACACATTTTTGTACAGATACTGAACTCTTGTATTGATTACTAAAAGCGATTGGAATTAAACGTACATATGATTAACGGA

Function

NR:

description
PREDICTED: dual specificity protein phosphatase CDC14A-like

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0007049 cell cycle biological_process
GO:0051301 cell division biological_process
GO:0005813 centrosome cellular_component
GO:0000922 spindle pole cellular_component
GO:0008138 protein tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K06639 CDC14; cell division cycle 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936015.2 True 3815 mRNA 0.45 15 29732265 29748113

Neighbor

gene id symbol gene type direction distance location
si:ch211-13f8.1 LOC108267891 coding downstream 26583 29693378 ~ 29705682 (-)
si:ch211-13f8.2 LOC108268058,LOC108437498 coding downstream 39710 29681244 ~ 29692555 (-)
LOC113539879 LOC108267234 coding downstream 65410 29629970 ~ 29666855 (-)
ripk2 ripk2,LOC107681812,LOC107715521,LOC107722215,LOC107701343 coding downstream 139438 29576698 ~ 29592827 (-)
LOC113540703 NA coding downstream 207204 29524989 ~ 29525061 (-)
xpr1b xpr1,LOC108267842,LOC107681714,LOC107593799,LOC107715512,LOC107722139,LOC105029208 coding upstream 18095 29766208 ~ 29794142 (-)
ddr2b LOC108267138 coding upstream 48957 29797070 ~ 29812557 (-)
nos1apb LOC108267139 coding upstream 65414 29813527 ~ 29825141 (-)
rgs5b LOC108267191 coding upstream 85549 29833662 ~ 29835191 (-)
brinp3b LOC108267163 coding upstream 120478 29868591 ~ 29899526 (-)
G73459 LOC108267889 non-coding downstream 17855 29713999 ~ 29714410 (-)
G73458 LOC108267889 non-coding downstream 18819 29712893 ~ 29713446 (-)
G73457 rc3h1,LOC108267889,LOC108437509 non-coding downstream 20071 29711086 ~ 29712194 (-)
G73452 LOC108268059 non-coding downstream 57995 29671187 ~ 29674270 (-)
G73439 NA non-coding downstream 124460 29607601 ~ 29607805 (-)
G73479 NA non-coding upstream 15392 29763505 ~ 29763791 (-)
G73448 NA non-coding upstream 17011 29765124 ~ 29765632 (-)
G73444 NA non-coding upstream 17634 29765747 ~ 29766115 (-)
G73481 NA non-coding upstream 30442 29778555 ~ 29780132 (-)
G73485 NA non-coding upstream 44099 29792212 ~ 29793644 (-)
zgc:110366 LOC108267892,LOC108437513 other downstream 1408 29724588 ~ 29730857 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other downstream 156538 29564221 ~ 29575727 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other downstream 560344 29148638 ~ 29171921 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other downstream 847300 28873578 ~ 28884965 (-)
LOC117597168 NA other downstream 940436 28787614 ~ 28791829 (-)
G73619 blvra other upstream 271393 30019506 ~ 30022525 (-)
LOC113540055 LOC108268301 other upstream 993414 30741527 ~ 30750968 (-)
ccl20l LOC100304631 other upstream 1025336 30773449 ~ 30775819 (-)
rem2 rem2,LOC108268350,LOC108442842,LOC107706340,LOC107567555,LOC107694663,LOC107583115,LOC107738122 other upstream 1498947 31247060 ~ 31277249 (-)
LOC117597010 NA other upstream 2122405 31870518 ~ 31871874 (-)

Expression


Co-expression Network