arl14 (LOC108267661)


Basic Information

Item Value
gene id arl14
gene name LOC108267661
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 28762094 ~ 28763277 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936110.2
CAGCAGCAAGTTTGAGTTCCTGCACATCGATAATGGGTCTAAAGGGATCGAAGCTCCCCGATGCTCGGATTCTCCTCCTGGGCCTGGACGGAGCCGGGAAATCAACGCTCCTCTTCAAACTGAAGTACAACGAGCTCTTCCAGACGGTCCCGACCATCGGCTTCAACGTGGAGATGATGGAAGCCAAGCAGAACAGGAAGAAGGTCACCCTGACGGTGTGGGACGTTGGAGGACAGGAGAAGATGAGAACGCACTGGAAGAATTACTACCAAGACACCGCCGGCCTCCTGTTCACCGTCGACTGTTGGGACAGGAGACGTCTGGACGAGGCCAGGCGAGAACTGGAGCGCGTGCTGAAGAACGAGCACCTCCGAGGACTTCCTGTAGTGGTTCTGGCTAACAAGCAGGATAAAGAAGGAGCCCTGACAGCAACCGAGCTCACCGAGGCGTTTAACCTGAGGAAGATGTGCAGCGACAGGGACTGGTTCGTTCAGCCGTGTTCAGGAAAAACCGGAGCTGGACTTCCGGAAGGGTTCAGGAGGCTGGCGCACCTGGTGAAAACCACCTCCGACAACAACATTAAAGAGACGGTCAGGCATTTGAGGAAGTCGATGAAGACGTAGCTATTTAACCTGCTGTAGCAACAAATATCCTATTAatccaaatatttttttgtaatgatttttattacatttatttaaaatatgcagaACCTgtcacgaccctgaccaggataaagtggttactgaagataaatgaattaatcattGATTTAGTATTCATCTTAAATCATGTTATCACAAtttttagtggtttttttttgaaattttatggaactttttcattttaactttttactTCACAACCCTGTAACTACATTTTCTGTCatataaatattgaaatgttttcCCTGTGTTCTTCATGTTAAAGTTTTTAATATTGGTCCAGTAATGTTTAAAGCGGGTTATTTTGACCCGATGAGTGAAAATGATTTGTTTCTTGAGTTTCAcgacttaatttttttttttttaaatgaatacctGTGTGATCTGTGCTCATCCATGAAGATGAATCATGTGCATGGTGCTATTGATCAAAGGTCCAAGCTTTATGGTGAGCAATGGAGTCATTTCTTTCAAGGCAAacacagtttattaaaaaaaaaaaaaaaaaaaaaaaaagaa

Function

NR:

description
PREDICTED: ADP-ribosylation factor-like protein 14

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K17200 ARL14, ARF7; ADP-ribosylation factor-like protein 14

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936110.2 True 1184 mRNA 0.43 1 28762094 28763277

Neighbor

gene id symbol gene type direction distance location
LOC113540626 rec8 coding downstream 5450 28745630 ~ 28756644 (-)
si:ch73-182a11.2 LOC108268045 coding downstream 25341 28722850 ~ 28736753 (-)
prdx1 LOC108267618,LOC108430734,LOC105891340,LOC103023705,LOC107577377,LOC107560788 coding downstream 50386 28708029 ~ 28711708 (-)
zte38 LOC108267617,LOC108430736 coding downstream 55571 28699669 ~ 28706523 (-)
uck2b uck2b,uck2,LOC108267616,LOC108430692,LOC104935075,LOC103363741 coding downstream 72082 28686556 ~ 28690012 (-)
ppm1la ppm1la,ppm1l,LOC108267660,LOC108430727,LOC107560765,LOC107722109,LOC107681725,LOC107701333 coding upstream 27 28763304 ~ 28785755 (-)
LOC113540190 NA coding upstream 35700 28798977 ~ 28827964 (-)
gipc2 gipc2,LOC108430720 coding upstream 79645 28842922 ~ 28861443 (-)
LOC117597036 NA coding upstream 114296 28877573 ~ 28880202 (-)
LOC113540041 dnajb4,LOC108430719,LOC107599850,LOC107681825,LOC107751861 coding upstream 148336 28911613 ~ 28918152 (-)
LOC117597077 NA non-coding downstream 44139 28713034 ~ 28717955 (-)
G72796 NA non-coding downstream 93451 28667323 ~ 28668643 (-)
G72726 NA non-coding downstream 290323 28397661 ~ 28471771 (-)
G72709 NA non-coding downstream 378634 28343134 ~ 28383460 (-)
G72824 otol1a,LOC108267659,LOC103045957,LOC108430690,LOC107701323,LOC107560771,LOC107593893,LOC107722646,LOC105899147 non-coding upstream 19646 28782923 ~ 28784140 (-)
G72893 NA non-coding upstream 69107 28832384 ~ 28833720 (-)
LOC117597038 NA non-coding upstream 128739 28892016 ~ 28896799 (-)
LOC113540203 NA non-coding upstream 177385 28940662 ~ 29029191 (-)
G73243 NA non-coding upstream 223195 28986472 ~ 28988383 (-)
LOC113540437 fam159a other downstream 109669 28648324 ~ 28652425 (-)
trnas-uga_2 NA other downstream 525289 28236724 ~ 28236805 (-)
trnas-uga_1 NA other downstream 525827 28236186 ~ 28236267 (-)
LOC117597043 NA other downstream 536491 28197991 ~ 28225603 (-)
prkag2b LOC108267467,LOC108430764,LOC108434244 other downstream 720309 28016064 ~ 28041785 (-)
LOC117597168 NA other upstream 24337 28787614 ~ 28791829 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other upstream 110301 28873578 ~ 28884965 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other upstream 385361 29148638 ~ 29171921 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other upstream 800944 29564221 ~ 29575727 (-)
zgc:110366 LOC108267892,LOC108437513 other upstream 961311 29724588 ~ 29730857 (-)

Expression


Co-expression Network