en2a (en2)


Basic Information

Item Value
gene id en2a
gene name en2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 28393936 ~ 28400141 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936218.2
TCCAGGAGGAGCcccctccttcttcttctccttctccttcttctcctgctccttcttcctcttcttcttcttcctcttcttcttcttcttcttcctctccgCCCGgagtttcctccctcagacCTGCTGCACACCCGCTTGTCACGGATCCCAGCTGTTTCTTGTAGTATTCtgcacattttgatttgatCTGATTTCGGAAGTTAGTTATTAGAGAGCGCATTCTGTTGCACGGGATCTGAAACTATGGTTGTTCTGTGTGAGCACGACGCGCAGGAAGAAGATCTGTTTACAGTCCAGAATCCACGCTGAGCATTATTCATAGCATTATTAATATCATACACTttcgaattttttttttttattgtttttctatttaaagCGAAAGTGGAGCGCAGTCGGTCTGGGTTGTATAAAGTGCCTGAGAAGTGCTAAGGGTTAAAGAGAGAGCCCGGGGAGGGAGAGGCAGAGTGTCCGTGTCAGCATGGATGagaaggagcagagagagagaggagacgcTGAGCGCGCGGGAGAGTCCGAGGTGAGAGCTCCGTCCCCGGGACAcgcgcctcctcctcctcatcctcatcctcatcctcctcatcctcctcatcctcatcctcctcatcctcctccgcCGCCTCCTCACCGAGTCACCAACTTCTTCATCGACAACATCCTGCGCCCGGATTTCGGACGCAGAAAGACGGATGAAAGCAGCGCGGGACACCCGGCGGAGGTCGGACAGGTGGGACAGGTGTCCACGGAGAGCACCTCCACACCGCACACCGGCAAGAAAGCGGACCCGGTGAGCGACGACGAGCCGCTGAAGGGGCGAGGAGAAAGCAAGGAGCAGTGCCTGAGCTCGGACTCGGAGCTTTCTCAGCCCAACTCGTCCACTTTAACCCAGAGCCAGCCCATGCTGTGGCCCGCGTGGGTTTACTGCACGCGCTACTCGGACAGACCCTCAGCAGCCACGCCCACCGCAGGTCCCCGAACCCGCAGACCAAAGAAGAAGAGCAGCAGCAAGGAAGACAAGCGGCCGCGCACCGCCTTCACAGCCGAGCAGCTGCAGCGCCTGAAGGCAGAGTTCCAGTCAAACCGCTACCTGACGGAGCAGCGACGGCAGAGCCTGGCCAACGAGCTGGGCCTTAACGAGTCGCAGATCAAAATCTGGTTCCAGAACAAGAGGGCCAAAATCAAGAAGGCTTCAGGAATCAAGAACACGCTGGCACTGCACCTGATGGCCCAGGGCCTGTATAACCACGCTACCACCACCAAGGAAGACAAATCAGACAGCGACTGAGG
>XM_034303331.1
TCCAGGAGGAGCcccctccttcttcttctccttctccttcttctcctgctccttcttcctcttcttcttcttcctcttcttcttcttcttcttcctctccgCCCGgagtttcctccctcagacCTGCTGCACACCCGCTTGTCACGGATCCCAGCTGTTTCTTGTAGTATTCtgcacattttgatttgatCTGATTTCGGAAGTTAGTTATTAGAGAGCGCATTCTGTTGCACGGGATCTGAAACTATGGTTGTTCTGTGTGAGCACGACGCGCAGGAAGAAGATCTGTTTACAGTCCAGAATCCACGCTGAGCATTATTCATAGCATTATTAATATCATACACTttcgaattttttttttttattgtttttctatttaaagCGAAAGTGGAGCGCAGTCGGTCTGGGTTGTATAAAGTGCCTGAGAAGTGCTAAGGGTTAAAGAGAGAGCCCGGGGAGGGAGAGGCAGAGTGTCCGTGTCAGCATGGATGagaaggagcagagagagagaggagacgcTGAGCGCGCGGGAGAGTCCGAGGTGAGAGCTCCGTCCCCGGGACAcgcgcctcctcctcctcatcctcatcctcatcctcctcatcctcctcatcctcatcctcctcatcctcctccgcCGCCTCCTCACCGAGTCACCAACTTCTTCATCGACAACATCCTGCGCCCGGATTTCGGACGCAGAAAGACGGATGAAAGCAGCGCGGGACACCCGGCGGAGGTCGGACAGGTGGGACAGGTGTCCACGGAGAGCACCTCCACACCGCACACCGGCAAGAAAGCGGACCCGGTGAGCGACGACGAGCCGCTGAAGGGGCGAGGAGAAAGCAAGGAGCAGTGCCTGAGCTCGGACTCGGAGCTTTCTCAGCCCAACTCGTCCACTTTAACCCAGAGCCAGCCCATGCTGTGGCCCGCGTGGGTTTACTGCACGCGCTACTCGGACAGACCCTCAGCAGGTCCCCGAACCCGCAGACCAAAGAAGAAGAGCAGCAGCAAGGAAGACAAGCGGCCGCGCACCGCCTTCACAGCCGAGCAGCTGCAGCGCCTGAAGGCAGAGTTCCAGTCAAACCGCTACCTGACGGAGCAGCGACGGCAGAGCCTGGCCAACGAGCTGGGCCTTAACGAGTCGCAGATCAAAATCTGGTTCCAGAACAAGAGGGCCAAAATCAAGAAGGCTTCAGGAATCAAGAACACGCTGGCACTGCACCTGATGGCCCAGGGCCTGTATAACCACGCTACCACCACCAAGGAAGACAAATCAGACAGCGACTGAGG

Function

symbol description
en2 Enables sequence-specific double-stranded DNA binding activity. Predicted to be involved in neuron differentiation and regulation of transcription by RNA polymerase II. Predicted to act upstream of or within nervous system development and positive regulation of transcription by RNA polymerase II. Located in fibrillar center and nucleoplasm. Implicated in autistic disorder.

NR:

description
homeobox protein engrailed-2

GO:

id name namespace
GO:0001708 cell fate specification biological_process
GO:0009952 anterior/posterior pattern specification biological_process
GO:0030901 midbrain development biological_process
GO:0043565 sequence-specific DNA binding molecular_function

KEGG:

id description
K09319 EN; homeobox protein engrailed

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936218.2 True 1308 mRNA 0.56 2 28393936 28400141
XM_034303331.1 False 1293 mRNA 0.55 2 28393936 28400141

Neighbor

gene id symbol gene type direction distance location
LOC113540125 LOC108267475 coding upstream 133682 28253028 ~ 28260254 (+)
zbtb41 zbtb41 coding upstream 241431 28112849 ~ 28152505 (+)
pfn2l pfn2,pfn2l,LOC107681776 coding upstream 282929 28104505 ~ 28111007 (+)
LOC113539840 LOC108267776 coding upstream 324670 28065067 ~ 28069266 (+)
nmur1b LOC108268311 coding upstream 339617 28047199 ~ 28054319 (+)
rbm33a rbm33 coding downstream 43637 28443778 ~ 28468852 (+)
rnf32 rnf32 coding downstream 158137 28558278 ~ 28588619 (+)
LOC113540233 NA coding downstream 202764 28602905 ~ 28611157 (+)
slc1a7a slc1a7,slc1a7a,LOC107722044,LOC107681716,LOC107671767,LOC107593788 coding downstream 254615 28654756 ~ 28666631 (+)
aldh9a1b aldh9a1,LOC108267615,LOC108430735,LOC107681718,LOC107593789,LOC105891333 coding downstream 290955 28691096 ~ 28699416 (+)
G72276 LOC108267477 non-coding upstream 271794 28114451 ~ 28122142 (+)
G72236 NA non-coding upstream 381477 28011744 ~ 28012459 (+)
LOC113540592 NA non-coding upstream 834509 27556085 ~ 27559427 (+)
G72336 NA non-coding downstream 68807 28468948 ~ 28471765 (+)
G72378 NA non-coding downstream 174781 28574922 ~ 28578950 (+)
G72404 NA non-coding downstream 219683 28619824 ~ 28637201 (+)
G72408 LOC108267757,LOC108260929,LOC107751522,LOC107566606,LOC107702784 non-coding downstream 223099 28623240 ~ 28627973 (+)
G72422 NA non-coding downstream 251273 28651414 ~ 28651621 (+)
insig1 insig1 other upstream 10514 28302851 ~ 28383422 (+)
htr5ab htr5a,htr5ab,LOC108412811,LOC103024346,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 other upstream 55763 28316404 ~ 28338173 (+)
sgip1b LOC108267185,LOC108430747,LOC107593781,LOC107719259,LOC107681818,LOC107709351 other upstream 987538 27384807 ~ 27406398 (+)
gng7 NA other upstream 1512466 26872676 ~ 26881470 (+)
LOC117597079 LOC108267150,LOC107738160 other upstream 2018110 26353189 ~ 26375826 (+)
gng5 NA other downstream 358404 28758545 ~ 28761451 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other downstream 392706 28792847 ~ 28797159 (+)
G72873 NA other downstream 474215 28874356 ~ 28912104 (+)
fubp1 fubp1 other downstream 781626 29181767 ~ 29196149 (+)
asip2b NA other downstream 1219852 29619993 ~ 29623797 (+)

Expression


Co-expression Network