shroom4 (shroom4,LOC107588210,LOC104951873)


Basic Information

Item Value
gene id shroom4
gene name shroom4,LOC107588210,LOC104951873
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 16605696 ~ 16648129 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936347.2
atttactgcCGCCATATTGAATTTGTAAATAGTAATGGTAGCTCTAATGGAAACAAGTTTCAGTGCTGTGCCAAGGGCAACACGTGTGCAAAATGAGGAGCTGCTTAGCCATCCGCGTAAAAGCCAACTCGAAGCTGGACAACGGACAACGCAGCGGTTAGCCGTTGCACAAGTCCCGCCCCTTTAGCTGGGTTATATTGGATTCTTCCAGTGAAACTCGACCCCAAACGGCCGTtccacctgtcaatcaaattgACTTTTCAGCCTGAAGCATTTCCTTCGCGCGGAAGCTCGGCATGCCCGTCCTGTGCAGCACATCTCTCCCCTCCCCTGtcctcccctcctctcctctcctctcccctcctctctcctGCCCTACACCCTCCCCCGTCCTCCCCTCCCCCCCTCCCCTGCCCTGCCCTGCCTCGTACCGCGGCTGCCCGGGTTGTTGTTAGTGATGGAGAGACAGGAGTGCGTGGTGTGAGAAGTGTGAGGCTCGAGTGGAAAAGTCCCGGAACCAGCATGGAGACTGTGGAACAGCTCGTGACCTTTAATCACATCCACGTCGAGCTCAACGGAGGCGCTCCGTGGGGCTTCACGCTGAAAGGAGGACTGGAGCACGGAGAGCCGCTCATCATAACAAAAataGAAGAAGGAGGGAAGGCAGCTGAGTGTAAGAAGCTGAGGGTGGGAGACGAACTGGTCAACATCAACGGCTCTGCACTCTACGGCTCCCGCCAAGAAGCTCTGATCCTCATCAAAGGCTCCTACAGGGTCCTCAAGATTGTTGTCCGCAGACGCACTGTGCCGCTGATTCATCCTCACTCCTGGCACCTGGTGAAGTTATCAGAAGCACCCTCCGTGCCTGGTTCAGCAGGCAGTTCAGACGGCCCGCTGGCCATGCAGCTCCACCCCACACCCTTCAGTGTACCGTGGCACTCTGGGGGTGACAGTGAGCTGTCCATGCCGTTGGGCCACCTCTCCCGGCACTACAGCACAGACCGCAGCAGCTCTGTGGGGAGTATGGAGAGTCTGGAAAACCCTCCAAGTCAGGGTTACTACGACAGCCAGCTCTCTCCCATTGACCCTGCCATCTTTAATAATAAACGTGACTCGGCTTATAGCTCTTTCTCTGCAAGCTCAAACACATCTGACTATACGGTATCTCTGCGCCCTGAGGAAAACAGCTCTATGGACAGTCTCCTGCAGGGCTTTGGCCCCTCCTGCAGGTTTACAGAGGGACATCCACATTCTGCAGCTAGTGGCCCAGGAGAACTGCACTGTGAGGAGGGGATTCTCAAGTCTAGGCCTCTGCCTCATAGGCCAGAGGCTAAAGTACGTCCATCATCCTATAGCTATGAAGAAGACAAGTGTGGACCTCCACAACCTCCCATGAGGAAGGATAGTTTTAGGGCTACCAGAGGCCTACCAGAGGTGTTGGATAAACGTTGTGTGTCTGCTCCTGTTGGTGTGTCAAGTTTGACTTGCTGCACTATTGAAGACCCTCCTCACATCCGCAAGGCACTGAATGGGAGTATGTGTCTGAATGGTCCAGACAATGACCAGGACTTGAAGGGAAACAAAGCAGAACCTTATTACACAATAAATTCTCAAAAAGAATTGTTTACAGATAACAAAGTCAGCTCAAAAGAGGgatgccaaaagagcagtcaCTTCCAGCCCCTAGATAGGCATTCACCCAGGCCCAGTCCTCCAACAGCAGAGAGCCTTGATAGTCAACTCAATCATTTAGATAACAATCCCCAGCCTAGGATGCACAGACATAGTGCCCCTGAAAAATTACTTGTCTCTCAGTTACACATGATAGAGCTctccagtgacaatagtgcacATTCAATGTCCCCTCCTAGCCTGTGGTCTAATACTCTGCACCCCAGGGAGGAACTACGTGAAGACAGTCCAGCTGTAGCTCAGGGTAAATGGGGAGGAAGCAGGTGCTCCACACCCGGTTCACTGACTACTTCGGAGCTAGAGGAACACAGGGCAGAGGGAGAACCATTTGATTCAGGCCAAATACTTACTCCTATCCAGCATACTTGGGGAAGATCTGTCAGTGTTCCAGGTGAAACTATAGGAAATGGATTTACTGAGTCTGGACCCTGCATAGATTCTCAGCTTCATGAGAGAGGTTTTGAGACCATTAGTGCTGCCTCCAGCATGGACACTCTACTTGAGAACCAGGAACAAGGAGAAGGCAAGAGTGATGATGGTGAAATTTCAAAGCCTCCTCAGAAGCGCCAGTTTCGTTCATCTAAGTCTCGCCGTCGAAGTGAACGTTTTGCCACAAACCTTCGCAATGAGATCCAGAGGAAGAAGGCTCAGCTACACAAGAGCAAAGGCCCAGGTGGTCTGCTGTGTGATGGCGAGACTGTAGAGGAAGAGGATATGGAAGAAAAATCCCCATCAGAGGTGCCAGCCATCCATCAACACAGGACCCAAACACAGACTAATCAACACAACAGCTTCCAGAAGTGTACTCCATCTCAGGCCAGAACAATTGCCTCAAACTCAACATTTCCAGGCAGATGCTGTGGAACAAATTCTGCAGAGCATTCAGGGAGCAGAACTGAAGATTTCCATCTTTCACAGGATGAAACCCATGGAGTCCAGTCAGCTGAGGTAAACAGAcctgtatgtgtgcgtgtggtcGAAGAGTTGGCACCACCGGGTAAAGCCAGACGTTGGCGCTGGACACCTGAGCACAAACTGCAACCAGAAATAGAATCAACTGAAATAAAGAAGAATGGTGAAGGAACAGCACCGCCTTCTTGGAACCTTGGAACAACAAGGGGAAGAGTGGTTTCTTCAGGTGGGCGCTCTACCCGAGCTGATGATTGTGACATCCCACCTTTTGCAGACCGCAGGAAGTTCTTTGAAGAGACTAGCAGAAACCTGAGCCAGTCTGTGACAAACCTGGCAGGGCTTACAGGCCACCGCCAGAGACCAGAGAAGCATGGGAGAAAGAAAGATCCAACTTCCCCTGAACCCCTTGAATCAGTCCCTGACCTTGGACGTAGGAGGTTCTCTTACCAGGGTGGAATTAATGATGGAACCTCAGTCAATTCATTTGATACTAGAAGAAACAGAGtccagcaagagagagacagagagagagaaaatacactggagagagaatgggagaaggagagggagaaagagaaacagatggaaaaagaacaagaacaagagaTGCGTAAAGAACAGGAGAGGCTACAGGCATGGGAAaaagagcaggagcaggagagggagagagaaagagctagAAAGGAAACCGaaagagagcgacagagagtgcaacagatggagagagactgGGAAACCAGTAGAGATCGCTTTTATGCAGGATATGACCTCAACAATACCACAGTGTTACCACCTTTGCCTCATGATAACCTAAAACAACCACTTACAGCTCAGAATCTAACCCTGCGTAATTCACGCTCTGCCAGTTTTCATAACAAGACCAACCCTGACATCCAAAAGCCATGCTCAGCCTTCCGACCTGTAACTAGCCAGCAGTATCAATCTGACCACTGCTGTCTACACCCTGGATACAAGGCCAGGAGCTGCACTCCAACAGAGGCTTTTCCTGTGCATGAGCTGGAACAAACAAAACTTAGGAGGAAGTTTAGCCTGACTGAAAGGGACTATACTCAGTGTAGACGAGATTCAAGACCAGCAGAGGTTACAGTGGGTCGGGGATTTCAGTGTCAGTGGCACAACAGACTATGTGATTGCAACAACAAGGATCAACCCATCATGTCATCAACACTGACAAACCGAGCCATGTCTGAAAATGACATTCGCATAGAGACCAAGTATCTTCATAGCCATGGTGCAGCTGCTACCAATAATAGCAGAATGTCTTCATCCATCGTCAGGGAACTGGATGAGAATGTTGTATCTGTAGTTgagacaaagaagaaaaaagggcctcctcctcctcggcCACCACCTCCAAAATGGGAGCAGTTCCATAAGAGAAGGGCATCTCACCACAGTCTCTTCTCTTCCCAACCTGCCTCTTCTTCCCAGTTCCAAACATACACACCCTGTCCATCCACTGCCCTGGAAATGACTCGGCAGCGGTCCTACAGCCTTCCTCCAAGCGATGATGCAGAAAGTCACCAAGCTCTGCTAAACCCTGCCTTAAATAACAGAGCTTTCAAACCTGTGGCCCTGCCTCCAAAAGAACGAGACACTACCAGAGTTCAGCACTATGAAATAAAGAGTTCCGAAGACATACCAACATCCTCAAATGAGTCGAGCCAAAGAGTTTCTGAGCAAAGCTTGGCCCAGCCTTCAGATCAGTACATACCAGCTGTGGTGAAACCAGTCATTTATAAGCATAGAGCAGAGTGGGACTTGACTTCTCCTCACAACTACACAGCAAGCAGCAATGCTAGCAAGTCACCAGTCCTGGTCCCTACTTTGGAGAATGGCTCTTGCACTGGACCTGTCTATCCTGAGTCCTACTTCACAATGAACTACAACCACCACCAGCATTTACAGAACCAGCCTCAGCAAATATGCATGCCTGGCAGAACCATCAAGACTCTGGAACCTTCCAACCAAAGTCTACCTCCCAGCGAGGATCAATCCTTGCCCTATGAGACAGACATAGATGAGTTCCATGAGAATGAGGAAACAGCAGTGGAGCAGCAAAGGCAAGCAGAAGACAGGACTGAGATTCAATGTTTTGCTCAGCCAGTGACGGTGCTGGAAACTGACATCGACACTGTGACTGACGATGAGGCTCCATCATCACGGATGAGGAGAGGGCAACGGGCGTCCATCGTGGACTCTTTATTGGAAGAGGATTGTGGCAGAGCTGGAAAGGAGCTTATGGGAGAACTGTTCCCTCACTATACAGGGAGTGGAGCAGAAGGCTGGAGAGGAGGCAATATAGTGAGTGGAGACATGGTAGAGAGGTCTTCTAGACAGAGCCCCTCAGTACCACAGGGCTCAACCTCTACCAGCTACAGAGGATCCAACAACAAAGCTCAACTCCTTAATAAGATGCCAAACTTCTCAGAGAtgaaggaggaggatgaagaacTTAATTACAAGAGGCAGCTGATGGAAAGCTTGCGTAAGAAGCTGGGTGTGTTGCGGGAAGCCCAAAGAGGTTTGCAGGAGGACATCAGAGCCAACGCTCAGCTTGGTGAGGAGGTGGAAAGCCTGGTGCTGGCCGTCTGCAAGCCAAACGAGGTCGACAAGTTCCGTATGTTTATTGGAGACCTGGACAAAGTGACAAGTCTTCTGTTGTCGCTCTCCGGCAGGCTGCTCAGAGTGGAGAGTGCTTTGGATTGCCTGGACCCAGAATCAGGCCATCGTGAAAGGCTCCCCCTGTTGGACAAGAAGAAGCAGCTCCTTGCACAGCTGGCTGAGGCTCAGGAGCTGAAGGAGCATGTGGACCGGAGGGAGGAGGCTGTGGGCAGGGTGCTGGGTCGCTGCCTGACTCCAGAACAACTGCGTGATTACAGCCATTTTGTGAAGATGAAGGCAGCACTGCTGGTAGAACAGCGGCAGCTGGATGATAAAATCCGGCTAGGGGAAGAACAGCTCCGAGGCCTGAAGGAGAGCCTTGGCCTGGGATACGGCCCTTACTGAAACTGGAACTGGAAGTAAAGTACAGGAAGGTTGCGTGTTCATATATGCACATAAATGGGCACACCTGAAAGTTTCTGATAAATAATTATGTTTGACTGTATTTGAACGTTATAACAAACCTGCAACATTGACAGTCAGAGACTTCTTAAGAAGCACAAGTACAGTGAATTTATCAGCTGTAGTATCAGCTGACGCTTGGTGGCAATATGTTGCCATTCCTTCACACAGAAGCATTACTCATAATTGTTGAGAAATAAGTAACACTAAGCAGTAAATGACCTCAAACTCCTACTCTAAGCCACATAATGCTGTGTGCGCGCACGTGCATCTCATTAATATCAACTGAAGACCTGTCCATGcactgctatttatttatttatatctctcaacaaaatcagaaaatcagATAAAGAACTCAAGAGTTATGTTGTTCTGTTTACTGAGATTTGGTCACCTTGTATATCAGCAAATTGAGCACTGAAAATTTTTGGCCCAATAATcatgttacatttcatgttactaGAAAGGTTTTTTGATCCATATGTGCAGGAATAGTGTTATGCTGTAACATCACAGAACAGCATTCTTCGGTTCAAACTGGAATTTGCTTTGTAATTTAAGTATAACAAAACCACCTTATGAAGATATCCATCTTTTCTTACTTCAGTCAGGTTAGAGCGATCAATGTGCATTCGTTACTCTCTGGGTATTTATGTGTTCTGTTCAGGTAACGGTCCACTTATTCAGGCAAATCATAAGCATTGAAGACATATTCGTGCCTTTTTCATTATAAAGTGCTTTACTGCATTTTTCGTAAGTGTTATCTGATTTTTTTGATGCCAAAGATTACTTTCATGTCTTAACACAAGAACAGAAATATGGTGCTTATTTTGGAGAACTACATGCAGTAACCTAGTCTTTAAAGGAAATTCTTGCTGTAGCTGTGTTTATTCAGTGCAGCTGTGTTTAACATTTTGATCACTTAAAACAGTTCTTACATTCCTTGTATATAATGTTCATGCTTGCAGTGTTGCAAATGTCatgtgtaatataatgtatCATTTTTGTTTCTGACTGAGCAAAGTGCTTTTTAATATCCTTATCCTCTTTAGAGGGAAGAATGCTGctttattgaacatttaatgTGCTGAGTTTTCAACCAACAATGTATTAAACCATATGTTGTtgagtttctctttttttttaatttcagaacTGCCTTTCAGCATTTAAGAGTGCCAAAGATGAATGTGCATTTGTTACAGTAAACAGCCAAAAACTATATTcatgtatactttttttttttacctaatgTATATActgtgctctttattttttttgttgtatcaTACCTGCGTAAATTATTTCACACTGGAAATGTATGAACATATTTGGTTGAACTATAAGTGATGAATTTCCCCAATTTTGGTTTGTTATAAATCCAGTGTGGAATATGTGGTATTGATtatagaatataaatattttaa
>XM_026936348.2
GGCTACTGCAGAATGGAGAAGGTCTGGAAGAAGTCATTATTCTGATGTCTTTAAACCGCTGACAATCTGGACTTAACAAGGATGGAGTGCTGTTTATTCATGGCTTGAGGCAACAGGGTTTGTTCTAATGGAAGGAGCTAGATAGCTTAGAGATCCATCTACTTGTTCTTGGTTCTCTCTTTCATGTGCAGCTCTCAGTCCTGGGTTTCAGGAGCTGTGAACACTTTGGAAACTGATGAGataGAAGAAGGAGGGAAGGCAGCTGAGTGTAAGAAGCTGAGGGTGGGAGACGAACTGGTCAACATCAACGGCTCTGCACTCTACGGCTCCCGCCAAGAAGCTCTGATCCTCATCAAAGGCTCCTACAGGGTCCTCAAGATTGTTGTCCGCAGACGCACTGTGCCGCTGATTCATCCTCACTCCTGGCACCTGGTGAAGTTATCAGAAGCACCCTCCGTGCCTGGTTCAGCAGGCAGTTCAGACGGCCCGCTGGCCATGCAGCTCCACCCCACACCCTTCAGTGTACCGTGGCACTCTGGGGGTGACAGTGAGCTGTCCATGCCGTTGGGCCACCTCTCCCGGCACTACAGCACAGACCGCAGCAGCTCTGTGGGGAGTATGGAGAGTCTGGAAAACCCTCCAAGTCAGGGTTACTACGACAGCCAGCTCTCTCCCATTGACCCTGCCATCTTTAATAATAAACGTGACTCGGCTTATAGCTCTTTCTCTGCAAGCTCAAACACATCTGACTATACGGTATCTCTGCGCCCTGAGGAAAACAGCTCTATGGACAGTCTCCTGCAGGGCTTTGGCCCCTCCTGCAGGTTTACAGAGGGACATCCACATTCTGCAGCTAGTGGCCCAGGAGAACTGCACTGTGAGGAGGGGATTCTCAAGTCTAGGCCTCTGCCTCATAGGCCAGAGGCTAAAGTACGTCCATCATCCTATAGCTATGAAGAAGACAAGTGTGGACCTCCACAACCTCCCATGAGGAAGGATAGTTTTAGGGCTACCAGAGGCCTACCAGAGGTGTTGGATAAACGTTGTGTGTCTGCTCCTGTTGGTGTGTCAAGTTTGACTTGCTGCACTATTGAAGACCCTCCTCACATCCGCAAGGCACTGAATGGGAGTATGTGTCTGAATGGTCCAGACAATGACCAGGACTTGAAGGGAAACAAAGCAGAACCTTATTACACAATAAATTCTCAAAAAGAATTGTTTACAGATAACAAAGTCAGCTCAAAAGAGGgatgccaaaagagcagtcaCTTCCAGCCCCTAGATAGGCATTCACCCAGGCCCAGTCCTCCAACAGCAGAGAGCCTTGATAGTCAACTCAATCATTTAGATAACAATCCCCAGCCTAGGATGCACAGACATAGTGCCCCTGAAAAATTACTTGTCTCTCAGTTACACATGATAGAGCTctccagtgacaatagtgcacATTCAATGTCCCCTCCTAGCCTGTGGTCTAATACTCTGCACCCCAGGGAGGAACTACGTGAAGACAGTCCAGCTGTAGCTCAGGGTAAATGGGGAGGAAGCAGGTGCTCCACACCCGGTTCACTGACTACTTCGGAGCTAGAGGAACACAGGGCAGAGGGAGAACCATTTGATTCAGGCCAAATACTTACTCCTATCCAGCATACTTGGGGAAGATCTGTCAGTGTTCCAGGTGAAACTATAGGAAATGGATTTACTGAGTCTGGACCCTGCATAGATTCTCAGCTTCATGAGAGAGGTTTTGAGACCATTAGTGCTGCCTCCAGCATGGACACTCTACTTGAGAACCAGGAACAAGGAGAAGGCAAGAGTGATGATGGTGAAATTTCAAAGCCTCCTCAGAAGCGCCAGTTTCGTTCATCTAAGTCTCGCCGTCGAAGTGAACGTTTTGCCACAAACCTTCGCAATGAGATCCAGAGGAAGAAGGCTCAGCTACACAAGAGCAAAGGCCCAGGTGGTCTGCTGTGTGATGGCGAGACTGTAGAGGAAGAGGATATGGAAGAAAAATCCCCATCAGAGGTGCCAGCCATCCATCAACACAGGACCCAAACACAGACTAATCAACACAACAGCTTCCAGAAGTGTACTCCATCTCAGGCCAGAACAATTGCCTCAAACTCAACATTTCCAGGCAGATGCTGTGGAACAAATTCTGCAGAGCATTCAGGGAGCAGAACTGAAGATTTCCATCTTTCACAGGATGAAACCCATGGAGTCCAGTCAGCTGAGGTAAACAGAcctgtatgtgtgcgtgtggtcGAAGAGTTGGCACCACCGGGTAAAGCCAGACGTTGGCGCTGGACACCTGAGCACAAACTGCAACCAGAAATAGAATCAACTGAAATAAAGAAGAATGGTGAAGGAACAGCACCGCCTTCTTGGAACCTTGGAACAACAAGGGGAAGAGTGGTTTCTTCAGGTGGGCGCTCTACCCGAGCTGATGATTGTGACATCCCACCTTTTGCAGACCGCAGGAAGTTCTTTGAAGAGACTAGCAGAAACCTGAGCCAGTCTGTGACAAACCTGGCAGGGCTTACAGGCCACCGCCAGAGACCAGAGAAGCATGGGAGAAAGAAAGATCCAACTTCCCCTGAACCCCTTGAATCAGTCCCTGACCTTGGACGTAGGAGGTTCTCTTACCAGGGTGGAATTAATGATGGAACCTCAGTCAATTCATTTGATACTAGAAGAAACAGAGtccagcaagagagagacagagagagagaaaatacactggagagagaatgggagaaggagagggagaaagagaaacagatggaaaaagaacaagaacaagagaTGCGTAAAGAACAGGAGAGGCTACAGGCATGGGAAaaagagcaggagcaggagagggagagagaaagagctagAAAGGAAACCGaaagagagcgacagagagtgcaacagatggagagagactgGGAAACCAGTAGAGATCGCTTTTATGCAGGATATGACCTCAACAATACCACAGTGTTACCACCTTTGCCTCATGATAACCTAAAACAACCACTTACAGCTCAGAATCTAACCCTGCGTAATTCACGCTCTGCCAGTTTTCATAACAAGACCAACCCTGACATCCAAAAGCCATGCTCAGCCTTCCGACCTGTAACTAGCCAGCAGTATCAATCTGACCACTGCTGTCTACACCCTGGATACAAGGCCAGGAGCTGCACTCCAACAGAGGCTTTTCCTGTGCATGAGCTGGAACAAACAAAACTTAGGAGGAAGTTTAGCCTGACTGAAAGGGACTATACTCAGTGTAGACGAGATTCAAGACCAGCAGAGGTTACAGTGGGTCGGGGATTTCAGTGTCAGTGGCACAACAGACTATGTGATTGCAACAACAAGGATCAACCCATCATGTCATCAACACTGACAAACCGAGCCATGTCTGAAAATGACATTCGCATAGAGACCAAGTATCTTCATAGCCATGGTGCAGCTGCTACCAATAATAGCAGAATGTCTTCATCCATCGTCAGGGAACTGGATGAGAATGTTGTATCTGTAGTTgagacaaagaagaaaaaagggcctcctcctcctcggcCACCACCTCCAAAATGGGAGCAGTTCCATAAGAGAAGGGCATCTCACCACAGTCTCTTCTCTTCCCAACCTGCCTCTTCTTCCCAGTTCCAAACATACACACCCTGTCCATCCACTGCCCTGGAAATGACTCGGCAGCGGTCCTACAGCCTTCCTCCAAGCGATGATGCAGAAAGTCACCAAGCTCTGCTAAACCCTGCCTTAAATAACAGAGCTTTCAAACCTGTGGCCCTGCCTCCAAAAGAACGAGACACTACCAGAGTTCAGCACTATGAAATAAAGAGTTCCGAAGACATACCAACATCCTCAAATGAGTCGAGCCAAAGAGTTTCTGAGCAAAGCTTGGCCCAGCCTTCAGATCAGTACATACCAGCTGTGGTGAAACCAGTCATTTATAAGCATAGAGCAGAGTGGGACTTGACTTCTCCTCACAACTACACAGCAAGCAGCAATGCTAGCAAGTCACCAGTCCTGGTCCCTACTTTGGAGAATGGCTCTTGCACTGGACCTGTCTATCCTGAGTCCTACTTCACAATGAACTACAACCACCACCAGCATTTACAGAACCAGCCTCAGCAAATATGCATGCCTGGCAGAACCATCAAGACTCTGGAACCTTCCAACCAAAGTCTACCTCCCAGCGAGGATCAATCCTTGCCCTATGAGACAGACATAGATGAGTTCCATGAGAATGAGGAAACAGCAGTGGAGCAGCAAAGGCAAGCAGAAGACAGGACTGAGATTCAATGTTTTGCTCAGCCAGTGACGGTGCTGGAAACTGACATCGACACTGTGACTGACGATGAGGCTCCATCATCACGGATGAGGAGAGGGCAACGGGCGTCCATCGTGGACTCTTTATTGGAAGAGGATTGTGGCAGAGCTGGAAAGGAGCTTATGGGAGAACTGTTCCCTCACTATACAGGGAGTGGAGCAGAAGGCTGGAGAGGAGGCAATATAGTGAGTGGAGACATGGTAGAGAGGTCTTCTAGACAGAGCCCCTCAGTACCACAGGGCTCAACCTCTACCAGCTACAGAGGATCCAACAACAAAGCTCAACTCCTTAATAAGATGCCAAACTTCTCAGAGAtgaaggaggaggatgaagaacTTAATTACAAGAGGCAGCTGATGGAAAGCTTGCGTAAGAAGCTGGGTGTGTTGCGGGAAGCCCAAAGAGGTTTGCAGGAGGACATCAGAGCCAACGCTCAGCTTGGTGAGGAGGTGGAAAGCCTGGTGCTGGCCGTCTGCAAGCCAAACGAGGTCGACAAGTTCCGTATGTTTATTGGAGACCTGGACAAAGTGACAAGTCTTCTGTTGTCGCTCTCCGGCAGGCTGCTCAGAGTGGAGAGTGCTTTGGATTGCCTGGACCCAGAATCAGGCCATCGTGAAAGGCTCCCCCTGTTGGACAAGAAGAAGCAGCTCCTTGCACAGCTGGCTGAGGCTCAGGAGCTGAAGGAGCATGTGGACCGGAGGGAGGAGGCTGTGGGCAGGGTGCTGGGTCGCTGCCTGACTCCAGAACAACTGCGTGATTACAGCCATTTTGTGAAGATGAAGGCAGCACTGCTGGTAGAACAGCGGCAGCTGGATGATAAAATCCGGCTAGGGGAAGAACAGCTCCGAGGCCTGAAGGAGAGCCTTGGCCTGGGATACGGCCCTTACTGAAACTGGAACTGGAAGTAAAGTACAGGAAGGTTGCGTGTTCATATATGCACATAAATGGGCACACCTGAAAGTTTCTGATAAATAATTATGTTTGACTGTATTTGAACGTTATAACAAACCTGCAACATTGACAGTCAGAGACTTCTTAAGAAGCACAAGTACAGTGAATTTATCAGCTGTAGTATCAGCTGACGCTTGGTGGCAATATGTTGCCATTCCTTCACACAGAAGCATTACTCATAATTGTTGAGAAATAAGTAACACTAAGCAGTAAATGACCTCAAACTCCTACTCTAAGCCACATAATGCTGTGTGCGCGCACGTGCATCTCATTAATATCAACTGAAGACCTGTCCATGcactgctatttatttatttatatctctcaacaaaatcagaaaatcagATAAAGAACTCAAGAGTTATGTTGTTCTGTTTACTGAGATTTGGTCACCTTGTATATCAGCAAATTGAGCACTGAAAATTTTTGGCCCAATAATcatgttacatttcatgttactaGAAAGGTTTTTTGATCCATATGTGCAGGAATAGTGTTATGCTGTAACATCACAGAACAGCATTCTTCGGTTCAAACTGGAATTTGCTTTGTAATTTAAGTATAACAAAACCACCTTATGAAGATATCCATCTTTTCTTACTTCAGTCAGGTTAGAGCGATCAATGTGCATTCGTTACTCTCTGGGTATTTATGTGTTCTGTTCAGGTAACGGTCCACTTATTCAGGCAAATCATAAGCATTGAAGACATATTCGTGCCTTTTTCATTATAAAGTGCTTTACTGCATTTTTCGTAAGTGTTATCTGATTTTTTTGATGCCAAAGATTACTTTCATGTCTTAACACAAGAACAGAAATATGGTGCTTATTTTGGAGAACTACATGCAGTAACCTAGTCTTTAAAGGAAATTCTTGCTGTAGCTGTGTTTATTCAGTGCAGCTGTGTTTAACATTTTGATCACTTAAAACAGTTCTTACATTCCTTGTATATAATGTTCATGCTTGCAGTGTTGCAAATGTCatgtgtaatataatgtatCATTTTTGTTTCTGACTGAGCAAAGTGCTTTTTAATATCCTTATCCTCTTTAGAGGGAAGAATGCTGctttattgaacatttaatgTGCTGAGTTTTCAACCAACAATGTATTAAACCATATGTTGTtgagtttctctttttttttaatttcagaacTGCCTTTCAGCATTTAAGAGTGCCAAAGATGAATGTGCATTTGTTACAGTAAACAGCCAAAAACTATATTcatgtatactttttttttttacctaatgTATATActgtgctctttattttttttgttgtatcaTACCTGCGTAAATTATTTCACACTGGAAATGTATGAACATATTTGGTTGAACTATAAGTGATGAATTTCCCCAATTTTGGTTTGTTATAAATCCAGTGTGGAATATGTGGTATTGATtatagaatataaatattttaa
>XM_026936349.2
GCTGCCTTATTACCGCTAAGTGACCACAAGCTTTCACTCATATTCACTGGAGCTGTTTACCTTGTGATGAGGGTTGACCACTGACACCAAAAACAGAATATGTTGTTAGCAAATTAGTAAAGTTTAGTTTTaggtctttatttttttatttttttccaacgAGCACCAATATATAGCTTTGTTTCGTCTGGTCCTGAAACAGACCTTGgtcttcttttctctcctgcTCTGGATGGGATTCCAGTTTATGCAAACGCACTGTGCCGCTGATTCATCCTCACTCCTGGCACCTGGTGAAGTTATCAGAAGCACCCTCCGTGCCTGGTTCAGCAGGCAGTTCAGACGGCCCGCTGGCCATGCAGCTCCACCCCACACCCTTCAGTGTACCGTGGCACTCTGGGGGTGACAGTGAGCTGTCCATGCCGTTGGGCCACCTCTCCCGGCACTACAGCACAGACCGCAGCAGCTCTGTGGGGAGTATGGAGAGTCTGGAAAACCCTCCAAGTCAGGGTTACTACGACAGCCAGCTCTCTCCCATTGACCCTGCCATCTTTAATAATAAACGTGACTCGGCTTATAGCTCTTTCTCTGCAAGCTCAAACACATCTGACTATACGGTATCTCTGCGCCCTGAGGAAAACAGCTCTATGGACAGTCTCCTGCAGGGCTTTGGCCCCTCCTGCAGGTTTACAGAGGGACATCCACATTCTGCAGCTAGTGGCCCAGGAGAACTGCACTGTGAGGAGGGGATTCTCAAGTCTAGGCCTCTGCCTCATAGGCCAGAGGCTAAAGTACGTCCATCATCCTATAGCTATGAAGAAGACAAGTGTGGACCTCCACAACCTCCCATGAGGAAGGATAGTTTTAGGGCTACCAGAGGCCTACCAGAGGTGTTGGATAAACGTTGTGTGTCTGCTCCTGTTGGTGTGTCAAGTTTGACTTGCTGCACTATTGAAGACCCTCCTCACATCCGCAAGGCACTGAATGGGAGTATGTGTCTGAATGGTCCAGACAATGACCAGGACTTGAAGGGAAACAAAGCAGAACCTTATTACACAATAAATTCTCAAAAAGAATTGTTTACAGATAACAAAGTCAGCTCAAAAGAGGgatgccaaaagagcagtcaCTTCCAGCCCCTAGATAGGCATTCACCCAGGCCCAGTCCTCCAACAGCAGAGAGCCTTGATAGTCAACTCAATCATTTAGATAACAATCCCCAGCCTAGGATGCACAGACATAGTGCCCCTGAAAAATTACTTGTCTCTCAGTTACACATGATAGAGCTctccagtgacaatagtgcacATTCAATGTCCCCTCCTAGCCTGTGGTCTAATACTCTGCACCCCAGGGAGGAACTACGTGAAGACAGTCCAGCTGTAGCTCAGGGTAAATGGGGAGGAAGCAGGTGCTCCACACCCGGTTCACTGACTACTTCGGAGCTAGAGGAACACAGGGCAGAGGGAGAACCATTTGATTCAGGCCAAATACTTACTCCTATCCAGCATACTTGGGGAAGATCTGTCAGTGTTCCAGGTGAAACTATAGGAAATGGATTTACTGAGTCTGGACCCTGCATAGATTCTCAGCTTCATGAGAGAGGTTTTGAGACCATTAGTGCTGCCTCCAGCATGGACACTCTACTTGAGAACCAGGAACAAGGAGAAGGCAAGAGTGATGATGGTGAAATTTCAAAGCCTCCTCAGAAGCGCCAGTTTCGTTCATCTAAGTCTCGCCGTCGAAGTGAACGTTTTGCCACAAACCTTCGCAATGAGATCCAGAGGAAGAAGGCTCAGCTACACAAGAGCAAAGGCCCAGGTGGTCTGCTGTGTGATGGCGAGACTGTAGAGGAAGAGGATATGGAAGAAAAATCCCCATCAGAGGTGCCAGCCATCCATCAACACAGGACCCAAACACAGACTAATCAACACAACAGCTTCCAGAAGTGTACTCCATCTCAGGCCAGAACAATTGCCTCAAACTCAACATTTCCAGGCAGATGCTGTGGAACAAATTCTGCAGAGCATTCAGGGAGCAGAACTGAAGATTTCCATCTTTCACAGGATGAAACCCATGGAGTCCAGTCAGCTGAGGTAAACAGAcctgtatgtgtgcgtgtggtcGAAGAGTTGGCACCACCGGGTAAAGCCAGACGTTGGCGCTGGACACCTGAGCACAAACTGCAACCAGAAATAGAATCAACTGAAATAAAGAAGAATGGTGAAGGAACAGCACCGCCTTCTTGGAACCTTGGAACAACAAGGGGAAGAGTGGTTTCTTCAGGTGGGCGCTCTACCCGAGCTGATGATTGTGACATCCCACCTTTTGCAGACCGCAGGAAGTTCTTTGAAGAGACTAGCAGAAACCTGAGCCAGTCTGTGACAAACCTGGCAGGGCTTACAGGCCACCGCCAGAGACCAGAGAAGCATGGGAGAAAGAAAGATCCAACTTCCCCTGAACCCCTTGAATCAGTCCCTGACCTTGGACGTAGGAGGTTCTCTTACCAGGGTGGAATTAATGATGGAACCTCAGTCAATTCATTTGATACTAGAAGAAACAGAGtccagcaagagagagacagagagagagaaaatacactggagagagaatgggagaaggagagggagaaagagaaacagatggaaaaagaacaagaacaagagaTGCGTAAAGAACAGGAGAGGCTACAGGCATGGGAAaaagagcaggagcaggagagggagagagaaagagctagAAAGGAAACCGaaagagagcgacagagagtgcaacagatggagagagactgGGAAACCAGTAGAGATCGCTTTTATGCAGGATATGACCTCAACAATACCACAGTGTTACCACCTTTGCCTCATGATAACCTAAAACAACCACTTACAGCTCAGAATCTAACCCTGCGTAATTCACGCTCTGCCAGTTTTCATAACAAGACCAACCCTGACATCCAAAAGCCATGCTCAGCCTTCCGACCTGTAACTAGCCAGCAGTATCAATCTGACCACTGCTGTCTACACCCTGGATACAAGGCCAGGAGCTGCACTCCAACAGAGGCTTTTCCTGTGCATGAGCTGGAACAAACAAAACTTAGGAGGAAGTTTAGCCTGACTGAAAGGGACTATACTCAGTGTAGACGAGATTCAAGACCAGCAGAGGTTACAGTGGGTCGGGGATTTCAGTGTCAGTGGCACAACAGACTATGTGATTGCAACAACAAGGATCAACCCATCATGTCATCAACACTGACAAACCGAGCCATGTCTGAAAATGACATTCGCATAGAGACCAAGTATCTTCATAGCCATGGTGCAGCTGCTACCAATAATAGCAGAATGTCTTCATCCATCGTCAGGGAACTGGATGAGAATGTTGTATCTGTAGTTgagacaaagaagaaaaaagggcctcctcctcctcggcCACCACCTCCAAAATGGGAGCAGTTCCATAAGAGAAGGGCATCTCACCACAGTCTCTTCTCTTCCCAACCTGCCTCTTCTTCCCAGTTCCAAACATACACACCCTGTCCATCCACTGCCCTGGAAATGACTCGGCAGCGGTCCTACAGCCTTCCTCCAAGCGATGATGCAGAAAGTCACCAAGCTCTGCTAAACCCTGCCTTAAATAACAGAGCTTTCAAACCTGTGGCCCTGCCTCCAAAAGAACGAGACACTACCAGAGTTCAGCACTATGAAATAAAGAGTTCCGAAGACATACCAACATCCTCAAATGAGTCGAGCCAAAGAGTTTCTGAGCAAAGCTTGGCCCAGCCTTCAGATCAGTACATACCAGCTGTGGTGAAACCAGTCATTTATAAGCATAGAGCAGAGTGGGACTTGACTTCTCCTCACAACTACACAGCAAGCAGCAATGCTAGCAAGTCACCAGTCCTGGTCCCTACTTTGGAGAATGGCTCTTGCACTGGACCTGTCTATCCTGAGTCCTACTTCACAATGAACTACAACCACCACCAGCATTTACAGAACCAGCCTCAGCAAATATGCATGCCTGGCAGAACCATCAAGACTCTGGAACCTTCCAACCAAAGTCTACCTCCCAGCGAGGATCAATCCTTGCCCTATGAGACAGACATAGATGAGTTCCATGAGAATGAGGAAACAGCAGTGGAGCAGCAAAGGCAAGCAGAAGACAGGACTGAGATTCAATGTTTTGCTCAGCCAGTGACGGTGCTGGAAACTGACATCGACACTGTGACTGACGATGAGGCTCCATCATCACGGATGAGGAGAGGGCAACGGGCGTCCATCGTGGACTCTTTATTGGAAGAGGATTGTGGCAGAGCTGGAAAGGAGCTTATGGGAGAACTGTTCCCTCACTATACAGGGAGTGGAGCAGAAGGCTGGAGAGGAGGCAATATAGTGAGTGGAGACATGGTAGAGAGGTCTTCTAGACAGAGCCCCTCAGTACCACAGGGCTCAACCTCTACCAGCTACAGAGGATCCAACAACAAAGCTCAACTCCTTAATAAGATGCCAAACTTCTCAGAGAtgaaggaggaggatgaagaacTTAATTACAAGAGGCAGCTGATGGAAAGCTTGCGTAAGAAGCTGGGTGTGTTGCGGGAAGCCCAAAGAGGTTTGCAGGAGGACATCAGAGCCAACGCTCAGCTTGGTGAGGAGGTGGAAAGCCTGGTGCTGGCCGTCTGCAAGCCAAACGAGGTCGACAAGTTCCGTATGTTTATTGGAGACCTGGACAAAGTGACAAGTCTTCTGTTGTCGCTCTCCGGCAGGCTGCTCAGAGTGGAGAGTGCTTTGGATTGCCTGGACCCAGAATCAGGCCATCGTGAAAGGCTCCCCCTGTTGGACAAGAAGAAGCAGCTCCTTGCACAGCTGGCTGAGGCTCAGGAGCTGAAGGAGCATGTGGACCGGAGGGAGGAGGCTGTGGGCAGGGTGCTGGGTCGCTGCCTGACTCCAGAACAACTGCGTGATTACAGCCATTTTGTGAAGATGAAGGCAGCACTGCTGGTAGAACAGCGGCAGCTGGATGATAAAATCCGGCTAGGGGAAGAACAGCTCCGAGGCCTGAAGGAGAGCCTTGGCCTGGGATACGGCCCTTACTGAAACTGGAACTGGAAGTAAAGTACAGGAAGGTTGCGTGTTCATATATGCACATAAATGGGCACACCTGAAAGTTTCTGATAAATAATTATGTTTGACTGTATTTGAACGTTATAACAAACCTGCAACATTGACAGTCAGAGACTTCTTAAGAAGCACAAGTACAGTGAATTTATCAGCTGTAGTATCAGCTGACGCTTGGTGGCAATATGTTGCCATTCCTTCACACAGAAGCATTACTCATAATTGTTGAGAAATAAGTAACACTAAGCAGTAAATGACCTCAAACTCCTACTCTAAGCCACATAATGCTGTGTGCGCGCACGTGCATCTCATTAATATCAACTGAAGACCTGTCCATGcactgctatttatttatttatatctctcaacaaaatcagaaaatcagATAAAGAACTCAAGAGTTATGTTGTTCTGTTTACTGAGATTTGGTCACCTTGTATATCAGCAAATTGAGCACTGAAAATTTTTGGCCCAATAATcatgttacatttcatgttactaGAAAGGTTTTTTGATCCATATGTGCAGGAATAGTGTTATGCTGTAACATCACAGAACAGCATTCTTCGGTTCAAACTGGAATTTGCTTTGTAATTTAAGTATAACAAAACCACCTTATGAAGATATCCATCTTTTCTTACTTCAGTCAGGTTAGAGCGATCAATGTGCATTCGTTACTCTCTGGGTATTTATGTGTTCTGTTCAGGTAACGGTCCACTTATTCAGGCAAATCATAAGCATTGAAGACATATTCGTGCCTTTTTCATTATAAAGTGCTTTACTGCATTTTTCGTAAGTGTTATCTGATTTTTTTGATGCCAAAGATTACTTTCATGTCTTAACACAAGAACAGAAATATGGTGCTTATTTTGGAGAACTACATGCAGTAACCTAGTCTTTAAAGGAAATTCTTGCTGTAGCTGTGTTTATTCAGTGCAGCTGTGTTTAACATTTTGATCACTTAAAACAGTTCTTACATTCCTTGTATATAATGTTCATGCTTGCAGTGTTGCAAATGTCatgtgtaatataatgtatCATTTTTGTTTCTGACTGAGCAAAGTGCTTTTTAATATCCTTATCCTCTTTAGAGGGAAGAATGCTGctttattgaacatttaat

Function

symbol description
shroom4 Predicted to enable actin filament binding activity. Predicted to be involved in actin filament organization. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be active in several cellular components, including adherens junction; apical junction complex; and apical plasma membrane. Human ortholog(s) of this gene implicated in Stocco Dos Santos type X-linked intellectual disability. Orthologous to human SHROOM4 (shroom family member 4).

NR:

description
protein Shroom4 isoform X2

GO: NA

KEGG:

id description
K18625 SHROOM; protein Shroom

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936347.2 True 7121 mRNA 0.47 11 16605696 16648129
XM_026936348.2 False 6716 mRNA 0.46 10 16620744 16648129
XM_026936349.2 False 6234 mRNA 0.47 9 16636648 16647786

Neighbor

gene id symbol gene type direction distance location
zpax4 LOC108268120 coding upstream 115213 16470260 ~ 16490483 (+)
si:dkey-19b23.8 LOC108268122,LOC108434612,LOC103044025,LOC107683552,LOC107707061,LOC105907161 coding upstream 140468 16460591 ~ 16465228 (+)
chd3 chd3,LOC107738011 coding upstream 186766 16371997 ~ 16418930 (+)
dnajc3b LOC108267637,LOC108434608,LOC107707053,LOC107683555,LOC107702051 coding upstream 239505 16356241 ~ 16366191 (+)
cldn15a cldn15,LOC103041259,LOC108434589 coding upstream 249733 16352761 ~ 16355963 (+)
cskmt mettl12 coding downstream 5692 16653821 ~ 16655884 (+)
krcp LOC108267668,LOC108434626 coding downstream 21328 16669457 ~ 16674227 (+)
mark2b mark2 coding downstream 27306 16675435 ~ 16715097 (+)
naa40 naa40,LOC107749810,LOC107691908,LOC107750594,LOC107668433 coding downstream 87938 16736067 ~ 16745357 (+)
b3gat3 b3gat3,LOC107750592,LOC107691906 coding downstream 98569 16746698 ~ 16750124 (+)
G65601 NA non-coding upstream 11239 16592447 ~ 16594457 (+)
G65580 NA non-coding upstream 27959 16569687 ~ 16577737 (+)
G65542 NA non-coding upstream 90855 16514637 ~ 16514841 (+)
G65495 NA non-coding upstream 162796 16431945 ~ 16442900 (+)
G65395 NA non-coding upstream 175010 16430461 ~ 16430686 (+)
G65643 NA non-coding downstream 28400 16676529 ~ 16677366 (+)
G65644 NA non-coding downstream 75766 16723895 ~ 16729352 (+)
G65654 NA non-coding downstream 103731 16751860 ~ 16752090 (+)
LOC113539905 NA non-coding downstream 110098 16758227 ~ 16763461 (+)
LOC113540740 NA non-coding downstream 112390 16760519 ~ 16760583 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other upstream 234739 16367956 ~ 16370957 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other upstream 286530 16310213 ~ 16319166 (+)
LOC113540079 sh3tc1 other upstream 565712 16023194 ~ 16039984 (+)
zgc:194930 LOC108268002 other upstream 1946760 14632030 ~ 14658936 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other upstream 2336356 14255744 ~ 14269340 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other downstream 687368 17335497 ~ 17401388 (+)
LOC113539940 NA other downstream 961363 17609492 ~ 17620079 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other downstream 1352029 18000158 ~ 18010962 (+)
frem1a frem1 other downstream 1465304 18113433 ~ 18143631 (+)
G66492 LOC108267609,LOC108437090 other downstream 1549183 18197312 ~ 18208564 (+)

Expression


Co-expression Network