adad2 (LOC108267669)


Basic Information

Item Value
gene id adad2
gene name LOC108267669
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 16663129 ~ 16669417 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936431.2
GCCTCACAGATGATGGACAGGCGTTTCAGCCTATAAGGAgcatttgttaatattattgGGGAAAAGTGAAGTCTTCGGCGCAGTAAttgtgttggggaaaaaaaagttgctaaCGAAGAAACGtaacatcCTGCAGGATCACCATGGATCCCAAAAACAGTGGAGGAGGGAAACGCCTTCCCAGAATAGCTGCTTCTCTGATTATGCGCTTCGCCTCAGAGAGGGAACCCAGCTTCAGTGTGCAAAGGGCAAGCTTGAGGCCTTCTCCTACTCCACCGACTTCACCTGTCCTTGAATTTGGGGATTTTCCGTACTCTTCGGCAGGATCCAGATCCAAGTCCCCTGACTCCCTGgttccagctccttcagaggAGTCCAATCCATCTGGACTGCAGTTGGCGAGAGGCCATATGGTGACTTCACCAACCTTCGTGGAGGACAATAATGACTCAGAAGAGGAATGCCTCTCTTCTGAGAGCCTGAACAGCCCTTCTGAAGGGGATGGCTTCTTACCAGGTCAGGGTGATACAGCAGAGAGCTCCCCTAAAAGAGGAAAGAGGACTGGAGTGAGGTTTACAGACTGGCACAAGAATCGCGTGGCGGCCCTGTGTAGTGAACGCTTTGACAAACTGCTGAGAGAATGTCCTGAGTACCACAGTACTAAAAGCTGCCTTGCTGCTTTTGTCCTGGAGAGAGAGGTGACTGACACAGGAGGGCGGTGTTGTGAACAATATGAAGTGGTGGCATTGGGCACAGGACAGAGCTGCTGCAGTGGTTGGCACTGTTTTACAGGCTCCATCGTTCATGACTGCCATGGTATCGTCATTGCACGCAGAGCCCTGAAAAGatattTGTATAAGCAGCTCATGTTGTTCTACAGCTCTGAGCCAGAGCTTCGAGAGCGCTCTATATTTCAGAGCACTcccacagagctgctgcttcAGGTCAAACCAAAGTTCTACCTGCATCTCTACACCAACCAGACCCCTAAAGGggcagcacaatacataatGAAGTCCCATAGCAGTGGCTACCAATCACTGAAGCTGCAATGCCATGCCAAAGGCTCTCTGATTCCTGCTGCCTTCCTGTCTCCCAGTATCTGGGGCGCTCGCATCTGCTGCATGTCTGACAGTGCAAAACTCACTCGCTGGACTGTCACAGGAATTCAGGGAGCGCTGCTGAGTCACTTCATTAAGCCATTGTACATCACCAGTGCCATTCTTGGTGACGCTAGCCATTGCTCTGATATAGTGTCTGACACCATCAACAAGCGCCTGGGGACTGGTCTGAAAGACGTCCTGATCCCCCCTTACCAACAAACGAGCATCTTCTTCCAAAATGGAGAGAATGTGGAACTGGCTGTAAGCTCAGACCACTGCAAAGACCTCAGTGTTAATTGGTGCCTGGGAGACTCCAGTATTGAGATTCTAGACAGCACAAGTGGATACGCCATCAGTGGgtCTCCTTTTGTAAGTGGACCTGGGTTCTCCAGTAGACTATGCAAAAGAGCACAGTTCTTCAGCTTCAGAAAAGTTGCTATGCTTTCTGGTCAACAAGAGCTTCTGTCCTTTGTAATCTACCACAAAGCCAAGacgGCTGCCCACATGTATCAAAAGGCCAAAGCTATGGTGAACCAGCAGTTCTTAGCCAACAATGCAGGACCATGGAACTCAAAACATCTGGTGGACAGCTTCAGTTGCTGACTATATTCTTAATCTCCTGCATTATTCTTTGTTAAAGTAAATTTATGTATCAAAAATACTTGatcagatgcttgatcagaaaTTGAACAATACATATGTACATGTTTCACTTGTTCTAAAAATGTTActagttttcttgtttttttttaacccagttGGTTCTTGTTTAGTTGTTGTTGCTCattcaagaaaaagaaaaactttaatTATACTTATTTGAAgacaaaagattaaaaaatgttcactcCG
>XM_034303757.1
GAAGTCTTCGGCGCAGTAAttgtgttggggaaaaaaaagttgctaaCGAAGAAACGGATCACCATGGATCCCAAAAACAGTGGAGGAGGGAAACGCCTTCCCAGAATAGCTGCTTCTCTGATTATGCGCTTCGCCTCAGAGAGGGAACCCAGCTTCAGTGTGCAAAGGGCAAGCTTGAGGCCTTCTCCTACTCCACCGACTTCACCTGTCCTTGAATTTGGGGATTTTCCGTACTCTTCGGCAGGATCCAGATCCAAGTCCCCTGACTCCCTGgttccagctccttcagaggAGTCCAATCCATCTGGACTGCAGTTGGCGAGAGGCCATATGGTGACTTCACCAACCTTCGTGGAGGACAATAATGACTCAGAAGAGGAATGCCTCTCTTCTGAGAGCCTGAACAGCCCTTCTGAAGGGGATGGCTTCTTACCAGGTCAGGGTGATACAGCAGAGAGCTCCCCTAAAAGAGGAAAGAGGACTGGAGTGAGGTTTACAGACTGGCACAAGAATCGCGTGGCGGCCCTGTGTAGTGAACGCTTTGACAAACTGCTGAGAGAATGTCCTGAGTACCACAGTACTAAAAGCTGCCTTGCTGCTTTTGTCCTGGAGAGAGAGGTGACTGACACAGGAGGGCGGTGTTGTGAACAATATGAAGTGGTGGCATTGGGCACAGGACAGAGCTGCTGCAGTGGTTGGCACTGTTTTACAGGCTCCATCGTTCATGACTGCCATGGTATCGTCATTGCACGCAGAGCCCTGAAAAGatattTGTATAAGCAGCTCATGTTGTTCTACAGCTCTGAGCCAGAGCTTCGAGAGCGCTCTATATTTCAGAGCACTcccacagagctgctgcttcAGGTCAAACCAAAGTTCTACCTGCATCTCTACACCAACCAGACCCCTAAAGGggcagcacaatacataatGAAGTCCCATAGCAGTGGCTACCAATCACTGAAGCTGCAATGCCATGCCAAAGGCTCTCTGATTCCTGCTGCCTTCCTGTCTCCCAGTATCTGGGGCGCTCGCATCTGCTGCATGTCTGACAGTGCAAAACTCACTCGCTGGACTGTCACAGGAATTCAGGGAGCGCTGCTGAGTCACTTCATTAAGCCATTGTACATCACCAGTGCCATTCTTGGTGACGCTAGCCATTGCTCTGATATAGTGTCTGACACCATCAACAAGCGCCTGGGGACTGGTCTGAAAGACGTCCTGATCCCCCCTTACCAACAAACGAGCATCTTCTTCCAAAATGGAGAGAATGTGGAACTGGCTGTAAGCTCAGACCACTGCAAAGACCTCAGTGTTAATTGGTGCCTGGGAGACTCCAGTATTGAGATTCTAGACAGCACAAGTGGATACGCCATCAGTGGgtCTCCTTTTGTAAGTGGACCTGGGTTCTCCAGTAGACTATGCAAAAGAGCACAGTTCTTCAGCTTCAGAAAAGTTGCTATGCTTTCTGGTCAACAAGAGCTTCTGTCCTTTGTAATCTACCACAAAGCCAAGacgGCTGCCCACATGTATCAAAAGGCCAAAGCTATGGTGAACCAGCAGTTCTTAGCCAACAATGCAGGACCATGGAACTCAAAACATCTGGTGGACAGCTTCAGTTGCTGACTATATTCTTAATCTCCTGCATTATTCTTTGTTAAAGTAAATTTATGTATCAAAAATACTTGatcagatgcttgatcagaaaTTGAACAATACATATGTACATGTTTCACTTGTTCTAAAAATGTTActagttttcttgtttttttttaacccagttGGTTCTTGTTTAGTTGTTGTTGCTCattcaagaaaaagaaaaactttaatTATACTTATTTGAAgacaaaagattaaaaaatgttcactcCG

Function

NR:

description
adenosine deaminase domain-containing protein 2-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936431.2 True 1955 mRNA 0.47 9 16663129 16669417
XM_034303757.1 False 1875 mRNA 0.47 9 16663129 16669350

Neighbor

gene id symbol gene type direction distance location
fam113 LOC108268071,LOC108434623,LOC107741458 coding downstream 1942 16655940 ~ 16661187 (-)
otub1b otub1,LOC106608596 coding downstream 9342 16649185 ~ 16653787 (-)
phka1a phka1,phka1a,LOC108267555,LOC107707917,LOC107702224,LOC107711571 coding downstream 78596 16566064 ~ 16584533 (-)
LOC113539955 LOC108267556 coding downstream 98992 16552388 ~ 16564137 (-)
LOC117596996 NA coding downstream 127243 16528806 ~ 16535886 (-)
rcor2 rcor2,LOC107588183,LOC107668449,LOC107749809 coding upstream 45788 16715205 ~ 16726855 (-)
arl2 arl2,LOC107588185,LOC107668402 coding upstream 93449 16762866 ~ 16768038 (-)
gpha2 gpha2 coding upstream 136443 16805860 ~ 16808136 (-)
LOC113539980 majin coding upstream 141267 16810684 ~ 16815789 (-)
badb NA coding upstream 149987 16819404 ~ 16823151 (-)
G65700 NA non-coding downstream 56537 16606007 ~ 16606592 (-)
G65508 NA non-coding downstream 211237 16451677 ~ 16451892 (-)
G65494 NA non-coding downstream 231611 16431136 ~ 16431518 (-)
G65493 NA non-coding downstream 233771 16429143 ~ 16429358 (-)
G65491 NA non-coding downstream 235722 16427201 ~ 16427407 (-)
G65715 NA non-coding upstream 5843 16675260 ~ 16684591 (-)
LOC117597072 NA non-coding upstream 59274 16728691 ~ 16735897 (-)
G65718 NA non-coding upstream 66736 16736153 ~ 16737913 (-)
G65722 NA non-coding upstream 133778 16803195 ~ 16804254 (-)
G65809 NA non-coding upstream 267796 16937213 ~ 16937420 (-)
bmp15 LOC108267203 other downstream 57412 16603809 ~ 16605717 (-)
leap2 LOC100304644 other downstream 68624 16592562 ~ 16594505 (-)
tnfsf12 tnfsf12 other downstream 236505 16419164 ~ 16426624 (-)
acox3 acox3 other downstream 591437 16054528 ~ 16071692 (-)
smim20 NA other downstream 671144 15973579 ~ 15991985 (-)
G66053 NA other upstream 731177 17400594 ~ 17402464 (-)
rnaseka LOC108267746 other upstream 770060 17439477 ~ 17444188 (-)
G66281 NA other upstream 924331 17593748 ~ 17634868 (-)
map11 c7h7orf43,cunh7orf43,si:dkey-3k24.5,LOC107687048,LOC107594676,LOC107754664,LOC107561780,LOC105895567 other upstream 1122809 17792226 ~ 17839915 (-)
LOC113540242 adamtsl1 other upstream 2380733 19050150 ~ 19155221 (-)

Expression


Co-expression Network