ak5 (ak5,LOC107703241,LOC107681791,LOC107599844)


Basic Information

Item Value
gene id ak5
gene name ak5,LOC107703241,LOC107681791,LOC107599844
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29080184 ~ 29128564 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936490.2
GTTCGCCAACTTCCACACTTGCTGCTGAGTGGAGGGGGTTTGGTGGGAGCCAGAATGTCACACACACGACCAGATCTGTAGACAATCCAGTGAAAGTGAAGCAGATAAACAGCAAACGAggattgtttgttttgttttgttttgtttttctgtgcactgtttattactgtattttttttacatttgattcCAGCGCGCGCTCCAGCACGAGACATGAACGTGAACGATGCCAAGGAGTATCTCTCCAGGAGAGAAATACCCCAGCTGATGGAGAGCTTGCTGACGGGACTGATGTATTATCGACCGGACGATCCCATCGAGTACATGGAGTCGTGCCTGAAGAAGGTGCGAGAGCTCGGCGGGACTGAAAAAGTGAGGTGGGACACTTTCGTAGGACAGGAGAAGAAGTCCCTGCCACCGCTCAATGGAGGGCAATCGCGACGGTCTTTCTTCCGCAACGTGTTACCCGACAGATACGAGCGTCTGCCGCCCATCCACCAGTTCTCCATCGAGAGCGACTCGGACTTGTCTGAAACAGCAGAACTGATTGAAGAGTACGAAGTGTTCGATCCGTCCAGACCGCGGCCCAAAGTCATCCTCATCATCGGTGGCCCAGGCAGTGGTAAAGGCACGCAGAGCCTGAAGATCGCGGAGCGCTATGGCTTCGAGTACGTCTCTGTGGGTGAATTGCTGCGAAAGAAGATGATCCACAATGCAACCAGCAACAGGAAGTGGAGTCTGATCGCCCGGATCATTACTAACGGCGAACTGGCGCCTCAGGAGACGACAATCACCGAGATCAAGCAGAAGATCATGAAGCTACCAGACGCCAGTGGAATAGTCATCGATGGCTTTCCTCGGGATGTTGCGCAGGCGCTTTCTTTTGAAGATCAGATTTGTACTCCAGACCTGGTGGTATTCCTGGCGTGCTCTAACCAGCGTCTAAAGGAACGTTTGGAGAAGCGAGCGGAGCAGCAGGGACGGCCGGACGATAACCCTAAAGCCACCGAGCGACGCCTCGCCAACTTCAAACAGAACACAGTGCCACTGGTTAAGTACTTCCAGGAGAAAGGCCTCATCGTCACGCTGGACGCAGACCGAGACGAGGAGGAAGTCTTCTCAGACATCAGCATGATGGTGGACAACAAGCTTTTCCCCACCAAAGAACCTGTAGCAGGCCCGAGTGAGCTGGACCTGAGTGTGCTAGCTGACAGCACCAGCCTCGCCGACGTTCCCTCCAGATTTGACGAGCAGGCTATCGAAGAGGAGGCAGAGGCGGCAGGGTACGGGGAACATACAGCAGAATGTTTGCCCATGGAGAAGAGGAAACCAAAGGTCATCTTCGTGATCGgcgGCCCCGGCTCAGGCAAAGCCCTGCAGTGTGAGAAGATGGAGGAGCGTTACGGTTTGAGGCGTCTCTGTCCCGGAGACATGCTGTGCAGCGAGCTGCAGTCGCACAGCGAGCGGGGACGCTTCCTCCGAGACCTGCTCGAGAGCGGACGACAGCTTCCTGAGGACACGCTGCTGGATCTGCTGTGTGAGTCGATGGAGTCTACAGTACGACAGGGGAAAGGATTCCTGGTCAGCGGCTTCCCGCGGGATCTGAGACAGGCGGAGGACTATGAGGCCAAGaTGGGCCAGCCCAGCGCCGTCCTACTGCTTGATTGCTCAGCGTCCACCATGACCAGACGTCTCCAGCAGAGAGCGCTGTCCAGCCTGCGCTCCACAGACGCCTGCCACAGAGAAGCCCGTCTCCGTGTGGAGAGCTTCTGCGGCACCGTGACTCCGGTCGCCACTCACTACGACACACTCGGGGTCCTGCACAAGattGATGCAGAACAGCCCCCTGACGATGTGTTCGAGCAGATCTGCCTGGTCCTGGACCCCTGTTAAACACCATGGAACTCTAcagaacatcacacaccattatcCTGCACTTATACATGGCTCATCAGCATCACTAGCATCCACCCACCATCATCACGTAGGAAAAATAACCTGGAAACAAGCTGTGACCTTGCGCTCAATCTTTCACTCTGCTGTACAGAGCATTCTGGTTCAAATCTCCTGTGTTAACGCTAGCTCTCTGTATGAAGTGCTTTAGCTCCACCTAGCATGGACTGAGGGGGGTGCGAGAGGCGGTGCgttatttcctctctctgtctgtattcCGACAAACTCCGCCTCCTGTGTTAGACTGGCGAGCGAGTATAAGCGACTGAGCTTTTAGGACGGAGGAATACGAAGTCGGGTTTTGTGCTGCGCTCCAAACCAAAAAGTATCAGAGTATATActtgatatttatatttctttcttctaatctttttttttttttttttttattttttttccc

Function

symbol description
ak5 Predicted to enable nucleoside diphosphate kinase activity. Acts upstream of or within cilium assembly. Predicted to be active in cytosol. Orthologous to human AK5 (adenylate kinase 5).

NR:

description
PREDICTED: adenylate kinase isoenzyme 5

GO:

id name namespace
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0019205 nucleobase-containing compound kinase activity molecular_function

KEGG:

id description
K00939 adk, AK; adenylate kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936490.2 True 2353 mRNA 0.53 14 29080184 29128564

Neighbor

gene id symbol gene type direction distance location
st6galnac5a st6galnac3,st6galnac5,st6galnac5a,LOC107751866,LOC107708707,LOC107681827,LOC107599846,LOC107703199,LOC107558179 coding upstream 37189 28940674 ~ 29042995 (+)
cope cope,LOC107709006,LOC107681743 coding upstream 149652 28923611 ~ 28930532 (+)
LOC117597035 NA coding upstream 173788 28901530 ~ 28906396 (+)
LOC117597120 NA coding upstream 192628 28885151 ~ 28887556 (+)
LOC117597034 NA coding upstream 212006 28863057 ~ 28868178 (+)
miga1 miga1 coding downstream 44192 29172756 ~ 29184256 (+)
LOC113540202 LOC108267626,LOC108437507 coding downstream 68025 29196589 ~ 29205743 (+)
LOC113540294 LOC108267627,LOC108267624 coding downstream 79770 29208334 ~ 29218020 (+)
LOC113539851 LOC108267627 coding downstream 90962 29219526 ~ 29225911 (+)
pls1 pls1,LOC108268020,LOC108437523,LOC107681752,LOC107709028 coding downstream 210559 29339123 ~ 29356789 (+)
G72917 NA non-coding upstream 25966 29053486 ~ 29054218 (+)
G72913 NA non-coding upstream 145875 28933983 ~ 28934309 (+)
G72910 NA non-coding upstream 148786 28931076 ~ 28931398 (+)
G72892 NA non-coding upstream 161786 28917742 ~ 28918398 (+)
G72889 dnajb4,LOC107708915,LOC107566472,LOC107690981 non-coding upstream 164926 28914629 ~ 28915258 (+)
G73000 LOC108268022,LOC108437525,LOC107681802,LOC107599840,LOC107565821,LOC107722302 non-coding downstream 170571 29299135 ~ 29301133 (+)
G73072 NA non-coding downstream 354698 29483262 ~ 29524242 (+)
G73069 eif4a2,LOC107708841,LOC107103884 non-coding downstream 390544 29519108 ~ 29521022 (+)
G73088 NA non-coding downstream 395734 29524298 ~ 29524836 (+)
G73089 NA non-coding downstream 397638 29526202 ~ 29526918 (+)
G72873 NA other upstream 168080 28874356 ~ 28912104 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other upstream 283025 28792847 ~ 28797159 (+)
gng5 NA other upstream 318733 28758545 ~ 28761451 (+)
insig1 insig1 other upstream 696762 28302851 ~ 28383422 (+)
fubp1 fubp1 other downstream 53203 29181767 ~ 29196149 (+)
asip2b NA other downstream 491429 29619993 ~ 29623797 (+)
zgc:153115 LOC108268059 other downstream 544950 29673514 ~ 29681175 (+)
uggt1 uggt1,LOC107748935,LOC107683622,LOC107727334 other downstream 1326193 30454757 ~ 30478293 (+)
G73944 NA other downstream 1617567 30746131 ~ 30767132 (+)

Expression


Co-expression Network