zmp:0000000660 (arap2)


Basic Information

Item Value
gene id zmp:0000000660
gene name arap2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 14889300 ~ 14968601 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936678.2
TTTCTAACGCGGAAAGAAGGCGGAACGGATGAATGCTGTAGCttccacactacacactacactgcaccaCGCCGACATGGTTCTGGTGGCTAAACTGAAAAGGAAAGTGGAAAGAGAcggttataaaataaataataaaaaaaaacccagaacgAGCTCAGTCAAGCTGTAAAGTGGATTTAGCCTGAAACAGCCTGCATTTGAGAGAGTGTTGTTCCTTTCTGAGTACAACCTTCTACTCATGGCACCAACCCTTCAGGTCAGTTTACTCATACTGTCACTGCCATGACCAGTGAAGTCCCAGATGGCTCCCCTTCCTCCTTCCCCCTGGACCCGAGTGAGGAgatctctctctggctctccaGCCTTCACTTGCCTCAGTATGCCACCAGCTTTACTCAGGCAGGCTACCACACCCTGGCAGACTGCAGGGGGCTTACTGAGGAGAAGCTCCTGCAAGTGGCTCACTTCCCCACTGGCCATCGGCGGAGAATCCTGCACAACCTTGAGGTCCTCATGGCAGGAGATCGTGACAAGGAAGGTTCTGAGATGgcaggaaggaagaaggaaggtTCTGAGATGGCAGGAAGGAAGAAAACGCCTGTTCCCTTTCCTAGAACTGTCTTTCTTAAGGAAGGGAAGAGAGTAACCTCCTCTCAAAATACAGAGACAAACAGCACTGGAGAAAATAACAGATTGTCTGAAACCCAGACTCTTCCTGCAAGGACTTGTAAAGAGAAAGCACTTAAACGTGAACCTGATTTTATCTCCACTGTCTCCCACACACTCCCACGTAGCAAATGCAAAGCGTCTTCTTCAGGTTCTAGATCCGCCTCTTTGGCCAGCAGCAGTGAATCGCTGTCACCTTCCTCACAGTCTCTGCCCTCGGATTGGGAGAACTTCTTAAAGGAGGCTGCTACTTCCATTGCACAGCCAGTCCTGGGTGTAAAAGATGATGTCTACTCAGAAGGTTGCTCAGTAGGATTCCAGGGAGTGATGGTGGATAATGAGATATATGAGAGTAGCCCAATCACAGCTTCTGGTCCATGGCCCACACGCTCCTACAAGCTACGACACAGGCCTGTCCCGGAGATCCCAGAACGCACCGTCATACCACCACATGACTGGAACGTGTCTGTGAAATCCGGCATGGAGCAGCCCAGCGGCACAGAGGATCCCAGCGGCAGCAGACAGAGAGCCCCTCTTCACGGGACACTGACATCTGAGGACATCAGTCCGTATGGTGAAGTTTACCTCTACAACACCATTGCAGAAAACAAACTAgttgTGGATACAAAGGAAATGTTAAACcaagaaacaaaggaaaaacTGGAACAGAAAATACCGAGGAAGCAGCAGGCCAAGCAACAAGAAAAGGTGTCAGAAAGCACAGGCAGGCGCTTCAGTGATGATTATGCTTTGCTTCAGCAATGCGTTCCCAGTCAGGAGCCAGCCAATGAGTGTTCTTTAAGCACACCAAAGTCCCTCCCACAGCTGGACCCAAGTCACAGGTGGATTCTCGTGGTGTTTGCTAGTGAGCCATTGGATGCTCTCTCTCGACTGGTGCAACACACTCTTCCTCTCCACAGCGAATCATCTATATCACCCTATGCCTGCTTCTATGGACGCCCTAAACAATCTATAAAAATGGGCTGGCTGGACAAGCTCTCTCCTCAAGGAAATCGTGTCTTTCAGAAAAGATGGGTCAAGTTTGATGGAGAGAATCTTACTTACTATAACAATGACAAGgagaTGTACTCTAAAGGACTGGTTTCTCTCCTAGCTGTTAAGCAGGTGCGCTCTGTGGGAGACAATAAGTTTGAGGTGGTCACCTCAATGAGAACCTTTGTTTTTCGAGTTGAAAAAGAAGGAGAGCGTCAGGAATGGCTGGCGGTGCTGCAGCCTGCTCTGAAGTCTCGCTCATCCGTTTCCCACACGCCTTGTAAGCTCAGCTCCAGCAAGAGCGGCTACGTGGAGCTGCGCGGCCACAAAGGCAAAGTCTACCTCAGCCTCATGGGAACCAAAATCCGACTCTGCAAAACAGACCAGGACTTCAACACTGGATTGGCTATCACCATGGTGGACCTGATGAGTGCCTGTGTCAAACATGTAGACCGCAGAGGCTTCGAGATCAACACCCCTTTCAAATCCTTCTAtttcacAGCTGAGTCCGAGCGGGAGAGAGAAGAGTGGATCGAGGCTGTGCAGGAATCAATTGTTGAAACTCTGTCCAATTATGAAGTGGCCGAGAAGATTTGGTTCAACCAGTCGAACAGGAGCTGTGCCGACTGTCGAGCTTCCCATCCTGAGTGGGCCTCCATTAACCTCGGAGTGGTCATCTGTAGAATATGTGCAGGTCAACATCGGTTTCTTGGCTCCGGTATCTCACAAGTGAGGAGTCTGAAGTTGGACAGCAGCATTTGGACCAATGAACTGGTGGAGCTCTTTTTGGAAGTTGGAAATGAGAACGCCAACAAATTCTGGGCTGCCAATCTTCCACCGGAGGAGGAGCTTCACGAGGGGGCGTCGCCAGAACAGCGTGCAATCTTTCACCGCAGGAAGTACAGAGAGAGGAAGTACAGGAAAGTTCTGGAAGGACTGAACAGCCAGGAGGAGCTcaaccagGCTTTGTGTTCTGCAGTCCTCCAGCCTGATGTATTGTTGACCATGGTGTTGGTGTTCAGTGGGGCAGATGTGATGTGTGCTACAGGAGATCCTGTCTACTCCACTCCTTACCTACTGGCTCAGAAAGCAGGCCAGAGGCTGCAGATGGAGTTTCTCTATCACAACcaactctcagAATTCGCAAAGCTGGAGATGGTAGGTGACAGCAGATCTTCAGTAGACATTTCCTCTTTCATGGATGGGATTCTTTACTGTTCGGTCAACATGCTGAAGGgcacactggaaaaaaaagggagagacGACCTGGCTCAACGCTGGTGCACGCTAGAAGGTGGCTACCTGAGTTACTACGATGGTGAAAAGAGCGCCACGCCGATAGGAAGAGTGGGTATCAGTGAGATGGTGAGCCTGGCCATCAACAACACGGAGACCATGACGGGAGCAGGGGCAGTGTTCACCTTTGAGATCTACCTGGAGTCTGAGAAAATGCTCTTGTTTGGCGCACAGACATCTGACGCACAAAGAGCCTGGGTCCATGCCATCAccaagTGTTTGGACCCTGAGAGGGCGCACTCTTTGCTGAAGAAGGACTGTGAGCTGATTGGTCGTTTGTACTATAAGGAGGGTCATGACTTTTATCATTGGAGACAAGGATGGTTCTCTTTAGTCGGCTCTGAACTGTTCCTTCATCCTGAAGACGAGCACACAAACGAGGTGGTTCTACAACTCAAACGCCTGCAGGAACTTACTGTCTCCACTCATTCGGAAGGAGATGAGAGGATTCAGGTTCTGCTCATGGTTGAGAGTGGCAGGACAATCTACATTCATGGCTTCACTAAACAGGACTTCACGTTATGGCACTCTGCCATCCAATTAGCTGCTGGCAGAGACGGCAGAGCACTAAGCAATCAACAGCTGACCAAAAATGACATCCCTATTATCATTGACAGCTGTATTGCCTTCGTCACGCAATACGgTTTGTGTCATCAGGGCATCTATCAGAAGAACGGTGACCCAAAGCGTGTAGCCCAGCTGCTGGAGGAGTTCACCAGAGACGCACGAAATGTTAAGCTTCGAGTTCAGGAACATCAATTAGAAGATGTAACAGATGTACTCAAAGGTTTCCTGTCCAATTGTGAGGATGCCTTATTAGCCAAAGAGCTCTACCCTTACTGGATTTCTGCCCTCGATGAAGTGAGTGAGAAGGACAGGGTTGAGAAGTACTCCACCTATATTCAGAATTTACCCAAGATCAACAGATCAACTCTGGCGGCACTACTGCAGCAtctgtacagGATTCAGAGCTGCTCTCACATAAACCAGATGAAAACTCAGAGTCTGGCATGTGTTTTCTCATCCTGCCTTTTCCAGACGGGAGGACATGCACCTCAAGAGACGTGTGTTGTGGAAGATCTCATCAACAACTACATTCAGCTCTTCTCTGTCAGTGAGGAGCAAGTCAGACAAATGGAGAAGGAGAACCGCTGTATCACAAGGTGGAAGGACACTACATTCTCTCCAGCAGGTGACCTGATCTTTGAGGTTTACTTGGAAAAGAAAGAGCCAGAAAACTGCTGTTTaatcaagGTCTCTCCCTCCATGTGCGCTGATGAACTGACTGACACCACTCTGGAGATGAAGGGCATACAGACAGGCCAGCATGACCTCTGGACCACATTTGAGGTCATTGATACTGGAGAACTTGAACGCCCATTACACTACAGAGAGAAGATTCTGGAGCAGGTTTTAGAGTGGAGCACGCTGGAGGATCCCGGGTCAGCTTTCCTGCTCATTAAAAAATTTCATGGATCTAAGATGTCCCGTTCCAACTCAGAAGGGCAGAAGGACTTCACTAAAGGAGAGCAGCTCAAGTTTAAAGATGGCTCCTGCAAACTGCTTTCTGGGAACAAGTTTCAGGACAAATACCTTGTACTGCGGGAAAAGAAGCTACTGCTGTATAAAGACGCAAAAAGTGCTAAACCAGAGAGAGAGGTTCCAGTGGAGTCGGTGAAATGCTACATAGGGATAAGAAAAAAGCTGAAACCAACAAGCAATTGGGGTTTCACAgtttacacacagaaacagcaaTGGTATTTCTGCTGTGAGGGAAAAGATTCACAGCTGGCCTGGGTTACAGCCATTATCAGAAGTAAGaatCAAGGAGACTTATGGCCTACATGCAAAGACAAGAGCAAAGCCTCAGATCAACCGAGCAGCAGAGAGCATGCTTCTGCTTGCCTGAGTTCAGAGATTGAAGCAGCCAAACACAGCAAGGAGGACAAGACGATGGTGCCCCTGAATGTCACTTCTGACAAGGTGAAGTCGAGGAACATAAATGAGGCtgataatttgcatagaatGGCAATGCTGGAGGGCTGTGTAAAGCATAAAAATCAAAAAGGGGATTCAATACTAGGACCAAATTTGGCCTCCAGTGGAGGAAATAATCCACTGTCAAGAAACAAAATGGCTGTCGAAGAACCACTACAGACTCGGTTTAGACCTGTACCTCATCCTGATTCTGGTAACCACACCAAAcctcagcagaaaaaaacaatgattgGATGCAGCACAGGACACTTGCCTCAGAGTCTTCTCAATGAACTGAGCACCGTTCTCAGCCAAACAGGACGAACACCCAGAAAAGAAAGCTGAAAGcttacaaacaaaaaacaaggcAAGAGTGAAGAGGCGGAAAGTCTTGCAAGTGGTACTTCGGAGGTTGAGAGAGCATATGACTCTCAGCTCTCAAGAAGACctcaaaaaatcaaaacaaagctaAATAATGTCAAATGTATATATTGTGCAGTCTAAGTGGACTAAAGCTTTTGCTCTGTTAGACTTTCACTAACCTTAAAAGAACATCTAACTGCAACCATCCAACCAATACTGCTGTACAGTGGTGTCTTGATGGCAAGACAAGGaagtgtatgtaatgtaaaggGCTCTAGTATAGATTTATAGGTCAAACATCAGTAGGAGTGTGTGGATGTATATGCCTCAGAGTGTACAGACTTCTTGTTCAACTTTGACCACGGTCAAACCAGGCTTCTGTCCACGGATCTCACTGCAACATACCAGATAATGGATGATATTTAGCAAAGCACAGAGTCCattacacaaatgaaaaaaaaattaacatcacCCACATACATAAGTAATTTTAGGCTACTTTTAGACAAACTCTATAAAAATGCGAGGCAATTATTTAAATTCTGCTtgattttctgtatttaattttgATGCTTAAATTGAGGTCTAGTGGAGGTCAGTCCACACAATCTTTTGACGTAAAAACAATGACCAATTTAaagtttgttttatatatagaaaGTATTTAGAATGAATGTggccttttaaggaaaaaaaaagtcctttcCATTTCCTCCAGTGTTAAAGTTTCCTAAACCGTCAACAGAAGCCCTTTTCTGCCGTGTTGCTGTAATATCCCAGGAGTCCAAGTCACCCAAAGCCATTAAATAATGAATCTTTTTCTGAGAGGGTCCACATGGGCTTTTGTTGTCCagtttgctttaaatatttagcAACATTTTATTATGCGCCATGTAGCTGCTGCCTTTATTTGATGTCCTTTAAAATATTCTCAGCGTGCACTTGTGCCTTTTTTCAAAACacgtaatgtaataatgtaaaacaatttgtgacattgtataaataaatgatgctAAATGTTA

Function

symbol description
arap2 Orthologous to human ARAP2 (ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2).

NR:

description
PREDICTED: arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2

GO: NA

KEGG:

id description
K18440 ARAP2; Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936678.2 True 6320 mRNA 0.47 34 14889300 14968601

Neighbor

gene id symbol gene type direction distance location
paqr9 paqr9 coding upstream 59389 14824102 ~ 14829911 (+)
adam19a adam19a,LOC108267694,LOC108428568,LOC107708434 coding upstream 127735 14686254 ~ 14761565 (+)
LOC113540153 nwd2,LOC107661962 coding upstream 266776 14576397 ~ 14622524 (+)
LOC113540157 LOC108267639,LOC108428574,LOC101077706 coding upstream 509749 14356048 ~ 14379551 (+)
ppp1r14bb ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967 coding upstream 635410 14229973 ~ 14253890 (+)
cckar cckar coding downstream 935754 15904355 ~ 15916921 (+)
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 1023574 15992175 ~ 16000945 (+)
htra3b htra3,LOC107757896,LOC107707797,LOC107660743,LOC107661977,LOC107549726 coding downstream 1071604 16040205 ~ 16050628 (+)
ttc5 ttc5,LOC107738047,LOC107683587 coding downstream 1117076 16085677 ~ 16092460 (+)
si:ch211-212k18.5 sall2 coding downstream 1130282 16098883 ~ 16107737 (+)
G64673 NA non-coding upstream 126704 14762335 ~ 14762596 (+)
G64668 NA non-coding upstream 208487 14680206 ~ 14680813 (+)
G64462 NA non-coding upstream 592828 14296270 ~ 14296472 (+)
G64459 NA non-coding upstream 594039 14295002 ~ 14295261 (+)
G64308 NA non-coding upstream 832413 14056527 ~ 14056887 (+)
LOC117597182 NA non-coding downstream 8725 14977326 ~ 15011493 (+)
G64963 NA non-coding downstream 232708 15201309 ~ 15201528 (+)
LOC117597190 NA non-coding downstream 537691 15506292 ~ 15556924 (+)
G65115 NA non-coding downstream 900597 15869198 ~ 15870771 (+)
G65170 NA non-coding downstream 1032554 16001155 ~ 16001461 (+)
zgc:194930 LOC108268002 other upstream 230364 14632030 ~ 14658936 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other upstream 619960 14255744 ~ 14269340 (+)
gc2 LOC108267421,LOC108412585 other upstream 1169846 13705417 ~ 13719454 (+)
cited1 cited1 other upstream 1327034 13558623 ~ 13562266 (+)
LOC113539889 LOC108267838 other upstream 1414263 13468552 ~ 13475037 (+)
LOC113540079 sh3tc1 other downstream 1054593 16023194 ~ 16039984 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other downstream 1341612 16310213 ~ 16319166 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 1399355 16367956 ~ 16370957 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other downstream 2366896 17335497 ~ 17401388 (+)
LOC113539940 NA other downstream 2640891 17609492 ~ 17620079 (+)

Expression


Co-expression Network