faah2b (LOC108267965)


Basic Information

Item Value
gene id faah2b
gene name LOC108267965
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 10635705 ~ 10644751 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936773.2
GCTCATGCTGTCATGCCTTTGCGCATGAAACCTGTCCTTCCCGTGTTGCACACCGTGACTTCTCTGGCTTCGCACTAAGTACACacgtatatatagtatatatatttactatGGGTTTAACAGCAGGAGAGAGGATTGTGCAGTGGCTCTTCCGTGCAGTCTCCAGCTTTTTCTGCGCGCTTTTTGTTTTGGTGTCGCCGCGACGCAAAGCAGGAAAAGTGGCGCCGGTCACCGAGTCGCTGCTCCTCATCCCCGCCGTGCAGCTGGCCGAGAAAATCCGCCGCAAACAGGTCTCGTGTGTAGAGGTGGTTCAGGCCTACTTAGACAGGATCCAGCAGGTGAACCCGCTCCTGAATGCTATGGTTAAGGACAGATTTTCAGCAGCTTTGGCAGAAGCAGCTCAGGTGGACAGGCTGATAGAGGAGGAGACCGGGGGGGAGGAGGCTCTTGCAGACCGACTTCCTCTGCTGGGGGTCCCTTTTTCTGTCAAAGAGTCTTTTTTCTTACAGGGTATGCCCTGCTCCACAGGCCTGGTCTCTCGGGCTGGTTTTGTTGCCAGTAAAGACGCCCCTGCCGTGGCCCTGCTGAAGAGAGCTGGAGCCATTCCTCTAGGAGTGACCAACACCAGTGAGCTGTGCATGTGGCTGGAGTCTAGCAATCACCTGTATGGCATCACCAATAACCCCTACGACACGACCAGGATATGTGGAGGAAGCTCAGGTGGAGAGGGCAGTATTCTGGCCAGCGGGGGCTCTGTGATCGGGATTGGTTCGGATATTGGAGGCAGCATTCGCATGCCCTGTTTCTTTAATGGCATATTTGGACACAAAGCGACTCCAGgaaTCATCTGTAATGAAGGCCAGCTCCCTCCTAGCTCTGGGCTTCAGGAGGACCTTCTGAGTACAGGTCCAATGTGTCGCTATGCTGAAGACCTGCTGCCAATGCTGAAGATAATGGCTGGAACAAATGCAGACAAACTATTGCTGTCCTCAGAGGTGGACCTGAAGAAGCTGCGTTTCTTCACAGTAGTAGATGATGGTGGCTCTCCGTGGACATCCCCTGTGGACAAACAGCTGGTTGAAGCACAGAGAAAGGTGATTCAGCACCTAGAGGCAGATTTGGGAGTCAAAGTTAAGGAAATGAGCTTTCCACAGCTGAAGTACTCCTACCAGATCTGGGACACATGCATGGCTCTGCCAGATAAAGATGGCAAGcCACCACAGCCTTTTGTGGAGCTGATGGCAGATGGAGGCTCGACCGTGTGGCCTGTGTGGGAACTGATCAAGTGGATTTTTGGCAAATCTAACCACACAATACCTTCCATTGGTCTGGCTCTAATGAACAGCAAACCATCACCGTTCTACCTCAAGGAGAAGGAAGCATTGCAGCATGACATGGACAAGGTGTTGGGGACAGACGGTGTGCTGCTGTACCCCTCTCATCCTCTCCTGGCCCCTAAACACCATCATCCATTATTCACAATATATAACTTCTCTTACACAGGGATCTTCAATGCGCTGGGCCTACCTGTTACCCAGTGTCCTTTGGGGCTGAGTGAGGAGGGTTTGCCCCTTGGCGTGCAGGTGGTGGGAGGGAAGCTGCAGGACCATCTAACGCTAGCTGTGGCTCTGTATCTGGAGAAAACTTTTGGAGGCTGGAGAGACCCAGGAACCACTTGAGAAACTGGACAATGTGGAGCTGGTGGACCCATGCTACTTTCAttagaa
>XM_034303242.1
GCTCATGCTGTCATGCCTTTGCGCATGAAACCTGTCCTTCCCGTGTTGCACACCGTGACTTCTCTGGCTTCGCACTAAGTACACacgtatatatagtatatatatttactatGGGTTTAACAGCAGGAGAGAGGATTGTGCAGTGGCTCTTCCGTGCAGTCTCCAGCTTTTTCTGCGCGCTTTTTGTTTTGGTGTCGCCGCGACGCAAAGCAGGAAAAGTGGCGCCGGTCACCGAGTCGCTGCTCCTCATCCCCGCCGTGCAGCTGGCCGAGAAAATCCGCCGCAAACAGGTCTCGTGTGTAGAGGTGGTTCAGGCCTACTTAGACAGGATCCAGCAGGTGAACCCGCTCCTGAATGCTATGGTTAAGGACAGATTTTCAGCAGCTTTGGCAGAAGCAGCTCAGGTGGACAGGCTGATAGAGGAGGAGACCGGGGGGGAGGAGGCTCTTGCAGACCGACTTCCTCTGCTGGGGGTCCCTTTTTCTGTCAAAGAGTCTTTTTTCTTACAGGGTATGCCCTGCTCCACAGGCCTGGTCTCTCGGGCTGGTTTTGTTGCCAGTAAAGACGCCCCTGCCGTGGCCCTGCTGAAGAGAGCTGGAGCCATTCCTCTAGGAGTGACCAACACCAGTGAGCTGTGCATGTGGCTGGAGTCTAGCAATCACCTGTATGGCATCACCAATAACCCCTACGACACGACCAGGATATGTGGAGGAAGCTCAGGTGGAGAGGGCAGTATTCTGGCCAGCGGGGGCTCTGTGATCGGGATTGGTTCGGATATTGGAGGCAGCATTCGCATGCCCTGTTTCTTTAATGGCATATTTGGACACAAAGCGACTCCAGgaaTCATCTGTAATGAAGGCCAGCTCCCTCCTAGCTCTGGGCTTCAGGAGGACCTTCTGAGTACAGGTCCAATGTGTCGCTATGCTGAAGACCTGCTGCCAATGCTGAAGATAATGGCTGGAACAAATGCAGACAActgtggtgagcagGATAGCATCTCAGAAAATACAACACgtttgaaccttgaggcagatgggctacaacagcagaagaccacatcagattccactcctaTCCTTGCCAACCCCCTACATGAGAGTCACAAACTATTGCTGTCCTCAGAGGTGGACCTGAAGAAGCTGCGTTTCTTCACAGTAGTAGATGATGGTGGCTCTCCGTGGACATCCCCTGTGGACAAACAGCTGGTTGAAGCACAGAGAAAGGTGATTCAGCACCTAGAGGCAGATTTGGGAGTCAAAGTTAAGGAAATGAGCTTTCCACAGCTGAAGTACTCCTACCAGATCTGGGACACATGCATGGCTCTGCCAGATAAAGATGGCAAGcCACCACAGCCTTTTGTGGAGCTGATGGCAGATGGAGGCTCGACCGTGTGGCCTGTGTGGGAACTGATCAAGTGGATTTTTGGCAAATCTAACCACACAATACCTTCCATTGGTCTGGCTCTAATGAACAGCAAACCATCACCGTTCTACCTCAAGGAGAAGGAAGCATTGCAGCATGACATGGACAAGGTGTTGGGGACAGACGGTGTGCTGCTGTACCCCTCTCATCCTCTCCTGGCCCCTAAACACCATCATCCATTATTCACAATATATAACTTCTCTTACACAGGGATCTTCAATGCGCTGGGCCTACCTGTTACCCAGTGTCCTTTGGGGCTGAGTGAGGAGGGTTTGCCCCTTGGCGTGCAGGTGGTGGGAGGGAAGCTGCAGGACCATCTAACGCTAGCTGTGGCTCTGTATCTGGAGAAAACTTTTGGAGGCTGGAGAGACCCAGGAACCACTTGAGAAACTGGACAATGTGGAGCTGGTGGACCCATGCTACTTTCAttagaa

Function

NR:

description
fatty-acid amide hydrolase 2-A-like

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor molecular_function
GO:0003824 catalytic activity molecular_function

KEGG:

id description
K01426 E3.5.1.4, amiE; amidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936773.2 False 1727 mRNA 0.52 11 10635705 10644751
XM_034303242.1 True 1856 mRNA 0.52 12 10635705 10644751

Neighbor

gene id symbol gene type direction distance location
pik3c3 pik3c3,LOC107691920,LOC107562280 coding upstream 40583 10574923 ~ 10595122 (+)
rgp1 rgp1,LOC107741481,LOC107668635,LOC107588171,LOC107691996 coding upstream 66221 10562232 ~ 10569484 (+)
trnak-cuu_21 NA coding upstream 69981 10565653 ~ 10565724 (+)
trnak-cuu_12 NA coding upstream 151188 10484444 ~ 10484517 (+)
LOC117597108 NA coding upstream 151558 10482489 ~ 10484147 (+)
nat8l nat8l,LOC107691926,LOC107741469,LOC107562319,LOC107753918,LOC107588165 coding downstream 34506 10679257 ~ 10689652 (+)
ptgr1 ptgr1,LOC108267959,LOC107588162,LOC107753922,LOC107668743,LOC107691929,LOC107562349 coding downstream 110126 10754877 ~ 10760025 (+)
si:dkey-11k2.7 ptgr1,LOC108440055 coding downstream 118824 10763575 ~ 10770209 (+)
txn NA coding downstream 126696 10771447 ~ 10775236 (+)
slc7a8a slc7a8a,LOC108267955,LOC107668787,LOC107753926,LOC108440039,LOC107742270,LOC107691931,LOC107562402 coding downstream 240755 10885506 ~ 10905558 (+)
trnak-cuu_20 NA non-coding upstream 104177 10531456 ~ 10531528 (+)
trnan-guu_13 NA non-coding upstream 104661 10530971 ~ 10531044 (+)
LOC117596986 NA non-coding upstream 129228 10499275 ~ 10506477 (+)
G62131 NA non-coding upstream 138345 10497130 ~ 10497360 (+)
G61842 NA non-coding upstream 276741 10357814 ~ 10358964 (+)
LOC117596985 NA non-coding downstream 170999 10815750 ~ 10816552 (+)
G62373 NA non-coding downstream 219904 10864655 ~ 10864861 (+)
G62416 NA non-coding downstream 262274 10907025 ~ 10910142 (+)
LOC113540371 NA non-coding downstream 375382 11020133 ~ 11022796 (+)
G62549 NA non-coding downstream 532278 11177029 ~ 11193851 (+)
trnak-cuu_19 NA other upstream 140235 10495398 ~ 10495470 (+)
trnak-cuu_18 NA other upstream 143836 10491797 ~ 10491869 (+)
trnak-cuu_17 NA other upstream 145055 10490578 ~ 10490650 (+)
trnak-cuu_16 NA other upstream 146269 10489365 ~ 10489436 (+)
trnak-cuu_15 NA other upstream 147493 10488140 ~ 10488212 (+)
c4h4orf48 c7h4orf48 other downstream 12606 10657357 ~ 10663411 (+)
LOC117596972 LOC108267738,LOC108267932,LOC108267931,LOC108267739,LOC108267937,LOC108261673,LOC108267938,LOC108267933,LOC108267935,LOC108267740 other downstream 945964 11590715 ~ 11605230 (+)
si:ch211-200p22.4 LOC108267499,LOC108434851 other downstream 1000150 11644901 ~ 11705336 (+)
si:dkey-112a7.4 LOC108268066 other downstream 1647740 12292491 ~ 12295133 (+)
tmem88b tmem88,bcl6b,LOC108267673 other downstream 2561906 13206657 ~ 13219859 (+)

Expression


Co-expression Network