fis1 (fis1,LOC108434607)


Basic Information

Item Value
gene id fis1
gene name fis1,LOC108434607
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 16343344 ~ 16349401 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936976.2
TTGCTCAGAATTTCCGGCAACATGGAAGCAGTGGTGGAAGATGTCGTAGCTCCAGAAGATTTAAagAGGTTTgagaaaaaatacagcttggAACTGGCAAAAGGGGCTGTGTCCAAAGACACGAAATTTGAGTATGCATGGTGTTTAATCAGAAGTAAATATACGAACGACATAAGGAAAGGGATTCAGCTATTAGAGGAGCTGGTACAGAAGAGCACAAAGGATGACCAAAGGGACTTTCTTTTTTATCTGGCTGTTGCATACTACAGACTTAAGGAATATGAGAAAGCTCTAAAGTACATTCGCATTCTGCTTAAGAATGAACCTGGAAATAAGCAGGCCATTGAGTTGGAAAAGCTCATCAATCAGGCACTAAAGAAAGATGGCCTGGTTGGCATGGCTATTGTTGGGGGCATCGGCTTGGGCGTGGCAGGATTAGCAGGACTGATTGGGTTGGCTGTGGCCAAATCTGGAAAATCCTAACAAGGAAATGAGGCGTTATAGCTCCGAAAGAACAAGGTCgattaaaaaccatgaagattgGCTTATCATCATTAAACAGGATGTGGACTGCCTAATATATCTTACgttgttttcttttctggttttttttctgcttttttaacttgcataaaaagaaataatcacAGCATCACTTTTACAGAATAGCCTCATATGTTAtcttttttgtgcatgtgttttaaaatctttGAGTGAAATATCTACATAATAAGTATTTCCTTTCACACgtgtttaaaacacaaaaacataatggCAGTGTAAATTGTTAGCAGGTTCTAATTATAACTAGAGTTGTTACACTGTAACACCTTAAgttcatatttatacattttgcatAACATATGTGCAATACATAAATCTGTTTCCATGCAgctgtctctttcttttaatATCGAAGTGCTGAGGTTGTATAGTGTGATATGACCGAAGTCCGACTAAGTCTCCTCGTAATCACAGATACCTCTGTTACTTTCCAGGTATCTTTGTTATATGTGGGATTTACTGTCACGTGTGTGTACTGTATCGTTACtggtgcgtgtgtgcgtgtgtgtatatgtgtgtgtgtaatctgagTCTGTGTGCACATGGTTTTCATGCTAATCAATAGTGCCCAGTTTCACTGAGGCACCTAGAAAGGGAACTAATTTTATCAGGATCCATACAATTAATGGGTGTATGAGTTGAAGGATAATATACCCATCTGTACATGATGCCAACTTGTGGTTTTACAACTAAAATGTGCTGTTAACCTTTTTAAACTGGATGTGTTGTAAAAGCAGTGTGTGAGCTGCAGTGTGATCACACTTTACCAGTCTATGTCTAGCTCTAACATCAAGCAGAACTGATGCCATTCTGCCCTGAAAGACTGAGTCAAAACAGTAGTTGGGCCTTGAGAGAAACAAATTGCTTATTGAGTTTGCACACATAACCTTGTCTCGTGGTCAACAGTCCTGTGAACAATGCTGTGGGCTGTTCTCACATCGTTGTTCATCCCACCTTTCCATCACTTGGATCTAAGATCATTTTGGTACGTCACTGGTTTTTACAACAGGATAGATTATAGCTGCCATCAGTAATGTTCTTTATGTTCCACATTGTTGTTAAAAATTAACTGAAGTAAAAGTGAATGATGAC

Function

symbol description
fis1 Acts upstream of or within lipid homeostasis. Predicted to be located in mitochondrial outer membrane. Predicted to be integral component of membrane. Predicted to be integral component of mitochondrial outer membrane and integral component of peroxisomal membrane. Is expressed in liver and retina. Orthologous to human FIS1 (fission, mitochondrial 1).

NR:

description
mitochondrial fission 1 protein-like

GO:

id name namespace
GO:0000266 mitochondrial fission biological_process

KEGG:

id description
K17969 FIS1, TTC11, MDV2; mitochondrial fission 1 protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936976.2 True 1656 mRNA 0.39 5 16343344 16349401

Neighbor

gene id symbol gene type direction distance location
mus81 mus81 coding upstream 33187 16299941 ~ 16310157 (+)
ovol1a LOC108267728,LOC108434587,LOC103038355 coding upstream 44623 16291819 ~ 16298721 (+)
LOC113539958 LOC108434586 coding upstream 59060 16278990 ~ 16284284 (+)
si:dkey-9k7.3 LOC108267726,LOC108434601,LOC103037388,LOC105895467 coding upstream 65850 16264254 ~ 16277494 (+)
tkfc tkfc coding upstream 79147 16256665 ~ 16264197 (+)
cldn15a cldn15,LOC103041259,LOC108434589 coding downstream 3360 16352761 ~ 16355963 (+)
dnajc3b LOC108267637,LOC108434608,LOC107707053,LOC107683555,LOC107702051 coding downstream 6840 16356241 ~ 16366191 (+)
chd3 chd3,LOC107738011 coding downstream 22596 16371997 ~ 16418930 (+)
si:dkey-19b23.8 LOC108268122,LOC108434612,LOC103044025,LOC107683552,LOC107707061,LOC105907161 coding downstream 111190 16460591 ~ 16465228 (+)
zpax4 LOC108268120 coding downstream 120859 16470260 ~ 16490483 (+)
G65335 znf638 non-coding upstream 112229 16223418 ~ 16231115 (+)
G65199 NA non-coding upstream 279883 16062088 ~ 16063461 (+)
G65184 NA non-coding upstream 288199 16019857 ~ 16055145 (+)
G65170 NA non-coding upstream 341883 16001155 ~ 16001461 (+)
G65115 NA non-coding upstream 472573 15869198 ~ 15870771 (+)
G65382 NA non-coding downstream 42728 16392129 ~ 16392363 (+)
G65395 NA non-coding downstream 81060 16430461 ~ 16430686 (+)
G65495 NA non-coding downstream 82544 16431945 ~ 16442900 (+)
G65542 NA non-coding downstream 165236 16514637 ~ 16514841 (+)
G65580 NA non-coding downstream 220286 16569687 ~ 16577737 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other upstream 24178 16310213 ~ 16319166 (+)
LOC113540079 sh3tc1 other upstream 303360 16023194 ~ 16039984 (+)
zgc:194930 LOC108268002 other upstream 1684408 14632030 ~ 14658936 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other upstream 2074004 14255744 ~ 14269340 (+)
gc2 LOC108267421,LOC108412585 other upstream 2623890 13705417 ~ 13719454 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 18555 16367956 ~ 16370957 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other downstream 986096 17335497 ~ 17401388 (+)
LOC113539940 NA other downstream 1260091 17609492 ~ 17620079 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other downstream 1650757 18000158 ~ 18010962 (+)
frem1a frem1 other downstream 1764032 18113433 ~ 18143631 (+)

Expression


Co-expression Network