ppp1r14bb (ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967)


Basic Information

Item Value
gene id ppp1r14bb
gene name ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 14229973 ~ 14253890 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026936979.2
tgtgtgtgtgtgtgtgtgtgtgagtgtgagtgagactgtctgtctgtctgtagagGGGGTTACACACAGTgatctacagcagcagaagaggaagagagaagggagagaggaGGGGAAAAGGAAGGACAAAACGACtggtgagaagaaaagaggaGGAATAGAGGACtgtttgttttcactgttttatgTCGATTTGAATAACGttaaggaggaaaaaaaccGCGTTCAGAAGAGCAAGTTGATTTGCACCAGTTTTGCATGAGCTGGAGAAAGAgagcgcagagagagagagagagagagagagagagaaaccctgagtgtgtaagtgtgtgtcttCTTCTCAGCTCACAAACCGACACGTGTTGAGCTTCACTCTACTTCATCTAGAGTTTAACCTGCTCTAACGTTCATCCAGGAGTGGAgctttagctgtgtgtgtgtgtgagagtgtgtatgtgtgtgtgtgtgtgtgtttactgagaCGGACACACTCTGTTTCATCTTCACGTGGCGTTTTTCACTCACACTGAGCTGAGCAACACGGCGAGGAAAAGCCCAGAGCAGAGTTTTGTCCCGCTGCTCTTCCTGAAGCGTCCCGGACTATGGCAGCGGTAACAACCCCGGAGTCGAGCCCTCAGCCCCGGGTCTACTTCCAAACCCCCCCCGGTACCGAAGAGAGCGAGCCCCCGGCCCGGAAACAAGGCCGGGTTACGGTGAAATACGACCGGAAGGAGCTGAGGAAGAGACTGAACTTGGAGGAGTGGATCATAGATCAGCTTACAGAGCTGTACGACTGTGAGgAGGAGGCGATTCCTGAACTGGAGATAGATGTGGATGAGTTATTGGACATGCAGAATGATGAGGATCGCGCTGCACGTGTTAAGGATCTGCTGGTGGACTGTTACAAACCTACTGAAGACTTCAGTAGTCGAGTTGCTTGACAAAATCCGCGGCATGCAGAAGCTCAGCACACCTCAGAAGAAATGATGCACCTATAGCCTCGGCTCCTCCTCCTAACCCTCCCCCAGCCAATCCCAGCTTCTTCCTCTGCTTCGCCAGGTGCTCGATCACATGAGGTGGAGGGGGAAGTGAGGTGACTGGGGAATCTAGCCAGTCAGATTCTTATAAGCAGggcttatttttgttttcttcattttgttaaCTTTATggtatattattttttttctaaaagggGAAAAGACTTCATAGTGTTTTGAAGCATTTGTAGAAATCCTAGCAATATATTTCTACACATACATTTTTAGATGTTAGGTGACTGTGTGAAATTTTGCTCTGATGCAATACTGTACGCGTGTCCCCAGTGGACAACACTCGCTTCAAACATGCTGTTTGTAATTctcaaatgtcaaaatgttaTGACCCTTACTGCAATATAGTAAGTTGGAAAAAGATAAGA
>XM_034303973.1
gacagtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgagtgagactgtctgtctgtctgtagagGGGGTTACACACAGTgatctacagcagcagaagaggaagagagaagggagagaggaGGGGAAAAGGAAGGACAAAACGACtggtgagaagaaaagaggaGGAATAGAGGACtgtttgttttcactgttttatgTCGATTTGAATAACGttaaggaggaaaaaaaccGCGTTCAGAAGAGCAAGTTGATTTGCACCAGTTTTGCATGAGCTGGAGAAAGAgagcgcagagagagagagagagagagagagagagaaaccctgagtgtgtaagtgtgtgtcttCTTCTCAGCTCACAAACCGACACGTGTTGAGCTTCACTCTACTTCATCTAGAGTTTAACCTGCTCTAACGTTCATCCAGGAGTGGAgctttagctgtgtgtgtgtgtgagagtgtgtatgtgtgtgtgtgtgtgtgtttactgagaCGGACACACTCTGTTTCATCTTCACGTGGCGTTTTTCACTCACACTGAGCTGAGCAACACGGCGAGGAAAAGCCCAGAGCAGAGTTTTGTCCCGCTGCTCTTCCTGAAGCGTCCCGGACTATGGCAGCGGTAACAACCCCGGAGTCGAGCCCTCAGCCCCGGGTCTACTTCCAAACCCCCCCCGGTACCGAAGAGAGCGAGCCCCCGGCCCGGAAACAAGGCCGGGTTACGGTGAAATACGACCGGAAGGAGCTGAGGAAGAGACTGAACTTGGAGGAGTGGATCATAGATCAGCTTACAGAGCTGTACGACTGTGAGgAGGAGGCGATTCCTGAACTGGAGATAGATGTGGATGAGTTATTGGACATGCAGAATGATGAGGATCGCGCTGCACGTGTTAAGGATCTGCTGGTGGACTGTTACAAACCTACTGAAGTAAGCACATTTTTCATAGTCGAGTTGCTTGACAAAATCCGCGGCATGCAGAAGCTCAGCACACCTCAGAAGAAATGATGCACCTATAGCCTCGGCTCCTCCTCCTAACCCTCCCCCAGCCAATCCCAGCTTCTTCCTCTGCTTCGCCAGGTGCTCGATCACATGAGGTGGAGGGGGAAGTGAGGTGACTGGGGAATCTAGCCAGTCAGATTCTTATAAGCAGggcttatttttgttttcttcattttgttaaCTTTATggtatattattttttttctaaaagggGAAAAGACTTCATAGTGTTTTGAAGCATTTGTAGAAATCCTAGCAATATATTTCTACACATACATTTTTAGATGTTAGGTGACTGTGTGAAATTTTGCTCTGATGCAATACTGTACGCGTGTCCCCAGTGGACAACACTCGCTTCAAACATGCTGTTTGTAATTctcaaatgtcaaaatgttaTGACCCTTACTGCAATATAGTAAGTTGGAAAAAGATAAGATATATGCGGCcttgtcctttttttctgtttttttttttaaatgtattcctTCATTTTATCTTGGGGGTTTTTCATACAGCATGAAAGAGCTTTGCAAGGGAGTGATGTAGATCTGTTCTGGGTATGATCTGGATGAGGATGAGGTGGATGGTAGTGGAAAACTGGAGCTTTTTTGAGACAAGCAAACCCACATACATAGAAACacacgtttacacacacacatgcagacagacgGGCGTCACCCCCCTCAGGGATCAGTGGGAACATATACCACACACCACAGCTGTGGTTATTAGGCCccaaactcacacacagatgtgcACGATGCATGTGGAGCACAGAGGGAGATGACGGCATGCTGGAGAATCTCGTGGCTTGCCATGAGGTCTGCCAGTTTATAAGATCCCgattaatgttttcatttgattcTGTTAAATCATCTTCTTTAGAAAGCCATCTGCTTCCTTTCTCATAGCCGATCAAACACAACAATAATAGGGCTAATCACATATTCCATGCCTGTCAGTGGACTGAGTGGCCCAGTGCTTCACTTTCAATCCCCCATTTTTCACATTCATTCAATATACACAAACGAGTGCACAGCCTGTTAATGGGTATGATATGTTATCTTGTAATGACTGTAATTAGTAACTCCACATGATCGGGAGTCAAATACAAGACAGAGAGTCCCTCTAACCACAGCTCCTATGTAGTTCCTACTAATTTGTGTCCTCCTCTCTCCATCCAGCCCTCATCTTTTCCCAGTAAAAATACCCTTTTCTATATCAGACGTTGCCTTAGTACATACCTGTATACTACGTTACACAAACCAAATAAATGGAGGCATTCATTATAAAAGAGCAATTTGAAACTTTTCAGGCTGTAGGGTTCAAAACCTCCTCATTGTACTTTCCTTGATTCTGCTTTCTAGAAAAAATAAGTTGAATCCATTTGAAAGTTGAATACAAGTTGAAAGGTAATTTTTAGatgtgcataaaataaaatggacttgtccattttattagtgtgtgtattatatcaggtaaagctgttgtttttttttcctacaacagcacacagaATATGCTAAAATCATTAACTAAATTTAGTAAGACACATGATGTATTTGATAAAATGCAGACATCTGACATTAGTCTGTAATTGAAGGTCATATTTGGTGGGGTGGGGGGAATTTATGAGAAAATGTAGCAATAAATTTTTGTTAGTTTCCTGGGTTTGTTAAACTTTAtgcaactttaataaaaaatattgaaaata

Function

symbol description
ppp1r14bb Predicted to enable protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in innate immune response. Predicted to act upstream of or within regulation of phosphorylation. Predicted to be located in cytoplasm. Is expressed in head mesenchyme; intermediate cell mass of mesoderm; pectoral fin musculature; solid lens vesicle; and somite. Orthologous to human PPP1R14B (protein phosphatase 1 regulatory inhibitor subunit 14B).
ppp1r14b Predicted to enable protein serine/threonine phosphatase inhibitor activity. Predicted to be involved in innate immune response. Predicted to be located in cytoplasm.

NR:

description
PREDICTED: protein phosphatase 1 regulatory subunit 14B

GO:

id name namespace
GO:0042325 regulation of phosphorylation biological_process
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K17555 PPP1R14B; protein phosphatase 1 regulatory subunit 14B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026936979.2 False 1417 mRNA 0.47 4 14229982 14252612
XM_034303973.1 True 2712 mRNA 0.43 4 14229973 14253890

Neighbor

gene id symbol gene type direction distance location
slc8a4b slc8a4b,LOC108267603,LOC108428577,LOC107721660,LOC107583282,LOC107661969 coding upstream 78684 14092494 ~ 14151289 (+)
hspa12b hspa12b,LOC107697252,LOC107721672,LOC107691462,LOC107744271,LOC107571934 coding upstream 149937 14064494 ~ 14080036 (+)
nagk nagk,LOC107697250 coding upstream 190366 14035207 ~ 14039607 (+)
m1ap m1ap coding upstream 213848 13973996 ~ 14016125 (+)
LOC113539767 t185a,tmem185a coding upstream 331468 13891113 ~ 13898505 (+)
LOC113540157 LOC108267639,LOC108428574,LOC101077706 coding downstream 102158 14356048 ~ 14379551 (+)
LOC113540153 nwd2,LOC107661962 coding downstream 322507 14576397 ~ 14622524 (+)
adam19a adam19a,LOC108267694,LOC108428568,LOC107708434 coding downstream 432364 14686254 ~ 14761565 (+)
paqr9 paqr9 coding downstream 570212 14824102 ~ 14829911 (+)
zmp:0000000660 arap2 coding downstream 635410 14889300 ~ 14968601 (+)
G64308 NA non-coding upstream 173086 14056527 ~ 14056887 (+)
G64095 NA non-coding upstream 187559 14041968 ~ 14042414 (+)
G64105 NA non-coding upstream 212304 14017286 ~ 14017669 (+)
G64103 NA non-coding upstream 216555 14013219 ~ 14013418 (+)
G64102 NA non-coding upstream 217658 14012098 ~ 14012315 (+)
G64459 NA non-coding downstream 41112 14295002 ~ 14295261 (+)
G64462 NA non-coding downstream 42380 14296270 ~ 14296472 (+)
G64668 NA non-coding downstream 426316 14680206 ~ 14680813 (+)
G64673 NA non-coding downstream 508445 14762335 ~ 14762596 (+)
LOC117597182 NA non-coding downstream 723436 14977326 ~ 15011493 (+)
gc2 LOC108267421,LOC108412585 other upstream 510519 13705417 ~ 13719454 (+)
cited1 cited1 other upstream 667707 13558623 ~ 13562266 (+)
LOC113539889 LOC108267838 other upstream 754936 13468552 ~ 13475037 (+)
G63903 NA other upstream 811277 13418377 ~ 13418696 (+)
slc16a13 slc16a13 other upstream 944139 13275462 ~ 13285834 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other downstream 1854 14255744 ~ 14269340 (+)
zgc:194930 LOC108268002 other downstream 378140 14632030 ~ 14658936 (+)
LOC113540079 sh3tc1 other downstream 1769304 16023194 ~ 16039984 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other downstream 2056323 16310213 ~ 16319166 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 2114066 16367956 ~ 16370957 (+)

Expression


Co-expression Network