ankhb (ankh,ankhb,LOC108437249,LOC107657429,LOC107713990)


Basic Information

Item Value
gene id ankhb
gene name ankh,ankhb,LOC108437249,LOC107657429,LOC107713990
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 23614440 ~ 23641469 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937124.2
GGAcggatgatgatgatttaataGCGACTATCGGCAACGCCATCTACTGCAGCGCCGGCTTCATTCACGGCCTCCGATTGGACACAGTGATAGCGATACACCCTGactggaagagagagagagagagagagagagagagagagagagagagagacgctccCTATTTGAAGTGCACacatttctatattttgttCCCCCTCCTCCGATGGATGAACAATGGAGATGCCGTCAGGCGAAATTTCTGGCGAGCCTCCTCTTTTCCCACGCGCTGCATCATTATTGACGATGCCCtcgctgttgttgttgttgttgttgttgtgtgggAGGCCAGGGACGGGCCTGAAGCGCCGCTAGAAAAGCGCACTCGTCTTGTTGCCGGTCTTCTTGTCCTCTCCGGAGTGGGCAGATGTGCGCGGAGACATGGTGACGCTCCCGGCTCTGGCGCACTACTGGCCTCTGGTGCGGTTCCTCGTGCCGCTGGCCATCACCAACATCGCCATCGACCTCGGCGAACAGGCTTTAAACAGAGGGATCGCAACAGTCAAAGAGGATGCGGTGGAAATGCTGGCCAGTTACGGTCTGGCCTATTCCCTGATGAAGTTCTTCACTGGGCCTATGAGCGATTTCAAGAATGTGGGATTGGTGTTCGTCAACAGCAAACGCGACCGAATCAAAGCCGTCTTGTGCATGGTCGCCGCAGGAACCGTAGCCATCATCTTCCACACACTGATAGCGTATACAGACCTCGGCTACTACATCATTAACAAACTGCACCATGTGGACGACTCAGTGGGCAATAAGACCAGGAAGGCTTTTCTCTACCTGGCTGCATTTCCTCTGCTGGATGCCATGgcCTGGACCCATGCTGGAATCCTACTAAAGCACAAGCACAGTTTCCTGGTTGGTTGCGCCTCTATCTCTGATGTCGTAGCGCAGaTTGTTTTTGTGGCTATCTTGCTGCACAGTCATCTAGAGTGTGTGGAGCCATTGCTGATTCCCATCTTGTCTCTGTACATGGGAGCTCTGGTGCGTTTTACCATTGTTGGACTAGGTTACTACCGAAACATTCACGACAACATCCCGGACTCCAGTGGCCCTGAAGTTGGGggaGATGCCACTATTAAAAAGATGCTGAATTTCTGGTGGCCCCTGGCCCTGATCTTAGCCACACAGCGGATCAGCAGACCCATCGTCAACCTGTTTGTTTCCCGTGACCTGAAAGGCACTTCTGCAGCCACTGAGgCAGTTGCAGTTCTGACAGCCACATATCCTGTGGGTCACATGCCATATGGGTGGTTGACTGAACTCCGTGTTATTTACCCTGCCTTTGACAAGAACAACCCAAGCAATAAGTTGGCAAACTGTGGTACGACCGTCACCAAGTCGCACATCAAGCGATTCACGTTTGTCTGTATGGCTCTGTCGATCACACTCTGTTTCGTGGTTTTCTGGACACCACACATTTCTGAACGGATCTTGGTGGACATCATAGGTGTGGACCATGCCTTTGCTGAGCTCTGTGTTGCCCCATTACgaatcttttctttctttcctataCCAGTGACGGTACGTGCTCACCTAACCGGCTGGCTCATGACCCTGAAGAAAACCTTCGTCCTGGCACCGAGCTCTGTGCTGCGGATCATCGTGCTCATCACCAGCCTCATCGTGCTGCCCTACATGGGGGTGCATGGAGCTACTCTAGGGGTTGGATCTCTCTTAGCTGGCTTCCTCGGAGAGTCTACGATGGTAGCAATCGCGGCCTGCTATGTCTACCGGAAACAGaaaaagaagaaagactgTGATGGGGAGGTGACCATCGAGGGGGAGGACGCGGCTCCTATGAACGAGGTGCGCTCTGGCCGCCGGATAGATGACGTCGTTGAACTGAGAGAGGAGGACGAGGAAGAAGAGTGACCTCGTGATTTTCTGAGACGTCACCCTCACGTGCATTCCTCCTGGTTATGTTCAGTGCTCGTGGGAGGATGTGTTGAGGGGGGGAACCAGGGATCTTTTGCTTTGCAGGGCAGTCTTTTAATCGCTTACTGCCCCCTGTTGCTGCTCTTTCCCCCTTTGCAATGTGCACATGGAGGATGCTTAAAAAGGGAGCTGTAGTTAGAAAtcatgaaagacagaaaggacACACATTTCTATTGTATTAAGTATCATTCAACCACACAAATGTACATCTCAGTAGATGTTTTCCAGCTGTCGTCGGGGATCGCTGCGTGGAGGACAGTGAAGATATCGATTTGTACCAAAGCAATGTCGCGTGCTAACTGCTTTTCATCTATGCTCTGAGCTCTACTGTGCTGCCGTCCTAAACGTTTATGAACCCTGACAtggaaagaaaatacaaaaatactacacacactctaacttAATCTTCTTGGAATGTGAATATCTTTGgttgttattttttatcttGCATACACTGCAGAAAGTGAAGAGAAGATATTACTTTCCAGGACCTCCGAACCCGAATGTTGCTCCACAGCTCAGACCTTTTATcctaaaaaataatgtttaaaatagagttaatatacagacacacacacacacatatatacatctCTATatagacagatttttttttttatcagatttgAGTGTGTATTAGATTAATAACATGACTAGATGaataacaaaatggcttcaGAGTGACAAGTGGTTGAAGTTTGTGGGCCATTTTAGAGGCACTATTTTTTAATATGCAATGTCATAGGTGTATAAACTCTGGTACCTTTttgtatgtgtgatgtgaagtCTGTATGTGGTGGGAAAGGGAAGGAAGatattgcattttcttttcatgctCATGTctgtttcagtattttaaaaaaagaccttACATAATTTGGggcatttattttctatttcagGATGTACCTTATTGAgatcagtatgtgtgtgtgtgtgtgtgtgtgtgtatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatacatacatacatacatacatacatacatgcatacatatatataatataaatgcacCATGAAGTCAGATTGATGATCCCTCTCCTGTCCGATAGTATTGTAATTATAAGTTTCTGCACACGTATTTATGATGTCTACAGCATTcgtttgtttgattttgtttgtgATGAAGAGCAATGCCTGGCCAGTGCTCCTTTGGTATTATACATTACTGCTTGATCCAAAGCAGAGGAAATGCACAGTAGACATTCAGACCTTTTACAGTTGTCCAGTTCAGATAATGACAGCTTTATTCCACAGTGATTAAAGGGTGACGATGTGGTTCAA

Function

symbol description
ankhb Predicted to enable inorganic diphosphate transmembrane transporter activity and inorganic phosphate transmembrane transporter activity. Predicted to be involved in regulation of bone mineralization. Predicted to act upstream of or within phosphate ion transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in autosomal dominant craniometaphyseal dysplasia and chondrocalcinosis. Orthologous to human ANKH (ANKH inorganic pyrophosphate transport regulator).
ankh Enables inorganic diphosphate transmembrane transporter activity and inorganic phosphate transmembrane transporter activity. Predicted to be involved in ATP export and regulation of bone mineralization. Is integral component of membrane. Implicated in autosomal dominant craniometaphyseal dysplasia and chondrocalcinosis.

NR:

description
progressive ankylosis protein homolog

GO:

id name namespace
GO:0030500 regulation of bone mineralization biological_process
GO:0035435 phosphate ion transmembrane transport biological_process
GO:0005887 integral component of plasma membrane cellular_component
GO:0015114 phosphate ion transmembrane transporter activity molecular_function

KEGG:

id description
K22734 ANKH, SLC62A1; progressive ankylosis protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937124.2 True 3317 mRNA 0.46 12 23614440 23641469

Neighbor

gene id symbol gene type direction distance location
otulinb LOC108268091 coding upstream 6239 23594961 ~ 23608201 (+)
stard3nl stard3nl,LOC107713985 coding upstream 212710 23392658 ~ 23401730 (+)
epdr1 LOC108267170,LOC107664036,LOC107558964,LOC108437243,LOC107713986 coding upstream 223439 23387009 ~ 23391001 (+)
ranbp9 ranbp9,LOC107556766,LOC107664064 coding upstream 238255 23353969 ~ 23376185 (+)
rnf182 rnf182 coding upstream 264813 23345058 ~ 23349627 (+)
mycb LOC108268289 coding downstream 6802 23648271 ~ 23650633 (+)
LOC113540051 NA coding downstream 372387 24013856 ~ 24016743 (+)
LOC113540619 NA coding downstream 379596 24021065 ~ 24024165 (+)
zgc:136930 LOC108267402,LOC107599883,LOC107733879,LOC108430265,LOC107657418,LOC107559002 coding downstream 480084 24121553 ~ 24127236 (+)
ccr9a LOC108267400 coding downstream 493207 24134676 ~ 24136808 (+)
G69641 NA non-coding upstream 3283 23610953 ~ 23611157 (+)
G69570 NA non-coding upstream 157234 23447463 ~ 23457206 (+)
G69522 NA non-coding upstream 245763 23367661 ~ 23368677 (+)
G69514 NA non-coding upstream 282911 23331033 ~ 23331529 (+)
G69449 NA non-coding upstream 322442 23291410 ~ 23291998 (+)
LOC117597085 NA non-coding downstream 13453 23654922 ~ 23767863 (+)
G69722 NA non-coding downstream 116915 23758384 ~ 23774271 (+)
G69735 NA non-coding downstream 205176 23846645 ~ 23849514 (+)
G69736 NA non-coding downstream 213606 23855075 ~ 23857571 (+)
G69870 NA non-coding downstream 280331 23921800 ~ 23922696 (+)
G69509 LOC108267411 other upstream 294097 23318504 ~ 23320343 (+)
LOC113540463 NA other upstream 961993 22649810 ~ 22652447 (+)
LOC113540377 NA other upstream 1852139 21752416 ~ 21762301 (+)
mettl4 mettl4 other upstream 1974283 21629076 ~ 21640157 (+)
plag1 plag1,LOC107570635 other upstream 2290473 21314218 ~ 21323967 (+)
klhl18 klhl18,LOC107657445,LOC107701005,LOC107733883,LOC107730797 other downstream 386637 24028106 ~ 24106223 (+)
G69971 NA other downstream 467326 24108795 ~ 24109889 (+)
kif2c kif2c other downstream 1217557 24859026 ~ 24871263 (+)
tnr tnr other downstream 2066358 25707827 ~ 25881110 (+)
LOC113539772 kiaa0040 other downstream 2255548 25897017 ~ 25902006 (+)

Expression


Co-expression Network