gpr158b (LOC108268005)


Basic Information

Item Value
gene id gpr158b
gene name LOC108268005
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 27585574 ~ 27619191 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937187.2
TGGAATTTTTGCGCCTCTCACATGCAACCGAGCCTTCACTGTGTTTGTGCctgaagagaggagaagagaggagaagagaggagagatgaTCCTGACTGGACCTGCATCATGGAGCGCAAACTGAAACCGTCACAAAGGATTTACATGTGGAGTGACGGCGAGGCTGCACGCGCGGTGTAACGGGATGACACTTGTCATGAGCGCgaggattaaaaataaaaataaaacaaaataaaaaagacctCAGAATGATTCTTGGAGTTCAGCAAGCCACGCATCTGTCTGTGAGGATGCGGGATTCGTTGTAGACGCGCGTGCTTGGGGATGCACGTTTGCATAACTAAACCCGTTTAGGATGCTCGCGCTGAGGAAGAGGATTTAAGAGCGAGCTTCTTTCCGGCGGACGCGGTCATGGGTGTGCTGCTGCTCTGCCTCCTTTTGCACGCGGGACTGGCGCGCGCCACGCACGACGGCTACGTGGAGTGGTCGGACGGCGGTgacgacgacgacgacgacGCCGCCGCCACCGCCGAAATCGGCGCGAGGCAACACCGCGTCCGTGGCACGGAGCGCGCGACTTCGGCGGGAGCCGGGGCGGAGGAGCTGCCGCGCGTGGTGGCCGCCTTCCTCCACACGGGCGACGCGTCCGCGCTCGCGCACGTGAACTGCTCGCGGCGTTACGAGCTCAGCAGCCTCGGTTCCGCTCCGCCGGCGCCACCCGTCGCTTCCGTACACTCCGTTCGCGCAGCGCTGGACGCCGTGTCGCGCGCCGCCGACTTCCTAAACGCGCTGGCGCGAGAGGCGAAGCAAgaagagcagcagcagcggcagcagcagcagcagcaggtgtgGTATCGCGCGCTGGTTCGGAGCATGCTGGACCGCGAGCCCAAGATCCACCGCGCCGCGCTCGCGCTCCACGCCGAGCAGCTCCACCTCCAGGCCACCAGGATGGACGGGCACGTGGAGCTGCGAGAACTTCCGGTTGAGGAGTCCGAGTGGAACCGCCAGGTCCGGAAAAGAACCCAGATGATAACGCAGACTCGAAGCTCCCAGAGCACACAAGGTCACGTGCAGTGGTCCGCGCCGTATCTGGAGTGTGAGCGCGGGCGCTTCATCCCGCACTGGCTTCTAACGCTGTCGGTGAAAGTGTATGAGCTGAACACAGAGCCAGAGATCAGgGGCGTGGTAAGGGTTGATGTCAATCTGCAGGATGTGGACATTGATCAATGCTCCAGCGCTGGCTGGTTTGCCGGCACTCACCGTTGCAATCTGACCACAATGGAGtgTAAACCGATTCCAGGCCACGGCTTCGTGTTGGACAAGTACAAGTGCCAGTGCAGGAGGGGATTTTACCAACACAGCCGAGTGGCACTCAACGGCTTCTCCAAATTGGAACGGGATCATTATGTTGGGGCCGAACCCTCCGACGTGCCGGCTCGCTGTCTGCCGTGTCAGGATGGCTGTGTGTTCTGTCGGGATGATACGCCGTGTCTGGCGCAGGAGGATAGCATCCTCCGCCTCGCCGTTGTCTCGTTCCAGAGCCTGTGTGTGCTGCTCGACTTCATCTGCATGACTGTGGTGTACCGCTTCCGTCGCAGCAAGaGAATCAAAGCGTCTGGTTTTATTCTTCTTGAGGCCATCCTGTCAGGTGCCATGCTCCTCTATCTTCCCgTGATGGTACTTTACTTTCAACCGAACGTTCTGCACTGCATTCTCCTGAGATGGGTTCGCCTTCTGGGCTTCGCTACGGTGTACGGAACGGTGATCCTCAAACTCTTCCGGGTGTTGAAGGTGTTCCTGTCACGTACAGCCCAGCGGATCCCTTACATGACCAGCTGCCGTGTTCTCCGTTTGCTTGGTGCCATATTGCTTGTAGTGCTCTGGTTCCTGGTGGCCTGGACATCAGCTGTGTGCCAGAGTCGTGATACTCATCATGGACTCATTGAGGAAGGTGTGACGCTAGAGGGTCTGCAGTTCAGCATGTGCAAGCTTGACCGCTGGGACTACATGATGGCTGTTGCTGAGCTTCTCTTCCTGCTGTGGGGGGTCTACCTGTGCTATGCCGTTCGCACCGTACCCTCCGCATTTCACGAGCCACGCTACATGGCAGTCGCCATCTATAACGAACTCCTCATCTCAGCCATATTTCACATCATTAGGTTCACCCTGGCTTCTGGCCTCCACCCAGATTGGATGCTGATGTTATGTTTTGTTCATACACATTTGACGGTGACAGTGACTCTGGGATTGCtgctcatcccaaagTTTGTGTTCACTGGTACTCACAGGCAGGATGACATCGCCACTGAGGCCTATGAGGACGAGCTGTACATGGGCCGATCTGGCTCCTACTTGAACAGCAGCATAAATTCTGCCTGGAGTGAGCACAGTTTGGACCCTGAAGACATAAGAGAGGAGCTAAAGAAGCTCTATGGCCAGCTAGAGATCTATAAGCGAAAGAAGATGATGGCGAATAACCCTCATCTCCAGAAAAAACGCAACTCCAAAAAAGGCATTGGACGTTCACTTATGCGGCGCATCACAGAAATACCCGAGACAGTGAGCCGTCAGTACAGTCGAGAAGACAGGGACGGAAGTGAACATGGCAGCAATCGCAGTACCCTACGTAGAAACCCATTTGAAtcttcccatggtggaaaatcCAGAGAGGACTCTCTAAAGAGTAAGGTATTCTCCTTGAAAAGGTCCCATAGCTATGACCATACACATGACCAGGCGGGGAACACAAATGGTGTTCCGGCTGATAAAATGGACAACTCTACAACTGAGTTGTCTCTGCTGGAAAGCTTAATGGGGAGAAGGTCTGCAAAGAAAAATCCAGAGGTACCAAAGGTCGAACCTGCAGAATCTGCAGAGTCGGTGCCACTTGTGTGCAAGTCCATCAGCGCACACAATCTTGCAGCAGACAAGAAGCCTATGCATCTCCGGTCCTCGATGATACAGAAGTCTCTGAGTGTCATAGCCAGTGCCAGAGAGAGAACCCTGGGGCTTGCAGGGAAGACCCATAGTGTTGAGGACGCAAGTAAGAAAGGGCTCAAGGCCAGAGACACCAGGATGCTTTCAGAAGTTGACGAGTCTCCTGAATGCTTCCCAAAGATGATCATCAGCCAATCTGTCGAGTACACCAAGACCCCAAGCAAAATGGGCATCATGAAGCAACAAGTGAGCGGAAGTCAGCCTTCAATTTGCTCTGAACCAGGGAGAAGCAAGGACCTTTATGACCTTTCAGAGGTTTGCCCCTGGGAAATGGAAGATTTGCCCATTCTGTCAGAGGGGAAAGCTCAAAAGCATGTTTCCATTGCCCCGAGTGAGACTAACATGATTCATGAGAGCAGCTCTAAAAGTGGAAAGTCTCAACACAAACAAAGGATGGTGGTTCCATCTCCATCAATCCGCCACCGTTCCAAAGATAAGGGTGGTAACAGAGAGGAAGGGAGTGACAAGAATgatgggaggaaacccaaaACACCACTTAACCTGAATGCCTACAAAGCAGAGGTCTGCCCTTGGGAATTTGAGGATCCATCTTCCAAAGGAGCTGAGACCCTTGACAGGACTAGCCGCAAGAAAAGTGTCACTCCGACAGATGGAAAGCCCAAGATCATCCTCTCAGACATCTCCAAATCCACTGGAAGCCTTCTGCAGCCTCCAGCCCTTATGGTGGACATTTGTCCATGGGACTATGACCAACCACCATCTCCTAACCAGGACAAGACCTCAAGCCCCACACATCATTCAAAGAGAAGGGACTCTAACTCAAAAAGAAAAGGTTCTTGCTCATCAAAAGGGAAGGGGAAGGATAAAGAGGACAATAGCCAAAGATCCAAAAGCAGGGAGAGACGAAGCTCTTCCAGTAAACCTTCTGAGAAACGCCGTGTCAGCCAGACATCAGAGAGTGGCCAGGTTAACCATGACGCATCTGGTAGAAGGAGAAGCTCGACAAAAGAGGTTGGAATCACTGATTGTAAACATGCTGCAGTATGCCCTTGGGAAACAGAGTCTATGCCAAGTGTCACCACAAAGGATGGGGACCTCCACAAAACATCTCAATCAACTGCACCAGCTGCTAGTAAATTCAACATGGCTGAGGTTTGCCCATGGGATTTCGATGATAAGACATTAGGGAACCATGCATGACACAATTACACACTTATCAGTGAATATTATGCTCTCTAGATTGGATTCCTGAGATGACGGAAGGTGACGTGAGAACTGCCTTATGTTCACTTGTctcattacagttttcaaaaGCCCATCTCACACTAAAAATTTGCCTCAATCCTGAAGATTAACTCCCACTAACCTACTGCCATTTTGTTTACATGAACCAGTTTGACCAGTATAAATGACCTGAGAAAGTGTTGGAACATCCTTCTACCCTGTTGCAATATAATGGCTTTGAACCCACTTTAAAAAAGTGCTTTCACATATGTAGTGTTTAGCTGGTTTGAATGGAACACTGGTATGTTCTCATCTTCAGTGAGAAAACAGTCAGGCAATCACGCTCGGGTCTGAGAGTGTCATAGCAAAGTGGTCTCAGTATTGCTTCCAAGTGTATTCTAGTAAGAAAGCAATTAGTCTCTGAATcaacccaaataaataaaaagagaaaataaacactggcCGTGATACACAAAGTGTTTTTTAGTCTAATTCCCTGTTCTCCATGCTTGGgtaatttttgtgatttctaaagGTTTGTTTACATTCTTCCCTAGCcatatgaggattttttttagcaCTACATGCATCTCAGCCAGCATTTGTTGGATGTGAAACGAAATAGCAAGCGAAACAAAAGTATCAAATTTCGCTCTCAACAAGCAGTCTACATGTGAAAGCATCTAGAGAACTGCTAAAAATTTCAAAAGCAAGTGAAACAAGAGCACAAATGTCATCCTGAAGTATCACACAGTGTcttttaaacactgaacaacCCATAACTCTGACATTAGGATGGTCTAAAGAGCTGTTTTTGAATGGATAATAAATTCGgcttgatttaaaatgaaattgcaTAACAAGGAAAAGGAATGATGAAAGGCAAATATCTTACCAATTCAGTGCACAATGTTTTGATCTAGTTAATCTAGTAAATATATAGCCATTTTTAACCAAAGAAAATTTAACATATTCAGCATCTGCTAAACATGCATCTTCCcacaattaaatataaatttctaGCACACTCAGAACACACAGGAAAGTCGTATATTTCTTCAACAGGAGAgcacaacatgttttttttggtgGGGGGGATTGCATGGATGAGTGGCTTGGTTGCATTAGTGTTGATATCGTTTTCCCTTTACTCCCACTTGAATACTGTAGTGTTGTGATTTTGCATCAGTATTCTCTGCTGTAATAACACATCGTCACTCAAGTGGATATTTATCTCTGTATCCTATGAAACAGTGTTCCAGTGGTTCTGCATGACCGTGAATAAACAGAGTCCCTGATTTCTCGTTGGGTTCTTATGAAACACCCTCGATGAAAAGACGCTTCCCTGAGCAAGCTGGTACATCCAGCCTGTGACGTTTCTATTGTATGTTTATATCGTGCTTGTCTGTGATGGCATGTACAGAAAATACCTCCAGCCTGCAATAAACATTTCAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K08469 GPR158; G protein-coupled receptor 158

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937187.2 True 5640 mRNA 0.49 12 27585574 27619191

Neighbor

gene id symbol gene type direction distance location
anxa13l anxa13,anxa13l,LOC108267681,LOC103040954,LOC107727547 coding downstream 54484 27521690 ~ 27531090 (-)
acbd5b NA coding downstream 90647 27484777 ~ 27494927 (-)
slc35a3b LOC108267645 coding downstream 129861 27447255 ~ 27455713 (-)
cmpk cmpk1,cmpk,LOC107719256,LOC107681787,LOC107559368,LOC107671754 coding downstream 144080 27433692 ~ 27441494 (-)
insl5b LOC108268041 coding downstream 171010 27413456 ~ 27414564 (-)
trnat-ugu_7 NA coding upstream 1865 27621056 ~ 27621128 (-)
trnat-ugu_9 NA coding upstream 5545 27624736 ~ 27624808 (-)
dpp6b LOC108267703,LOC108430761 coding upstream 85090 27704281 ~ 27839097 (-)
cpdp LOC108268310,LOC108430687,LOC105899208 coding upstream 437521 28056712 ~ 28064529 (-)
tsc22d2 tsc22d2,LOC107709364,LOC103395840,LOC107559349 coding upstream 456425 28075616 ~ 28093937 (-)
G72094 NA non-coding downstream 140460 27444743 ~ 27445114 (-)
G72074 NA non-coding downstream 178755 27403137 ~ 27406819 (-)
G72073 NA non-coding downstream 182939 27401670 ~ 27402635 (-)
G71955 NA non-coding downstream 298876 27286239 ~ 27286698 (-)
G71952 NA non-coding downstream 301917 27281049 ~ 27283657 (-)
G72607 NA non-coding upstream 293679 27912870 ~ 27958488 (-)
LOC117597146 NA non-coding upstream 355279 27974470 ~ 27985856 (-)
G72604 NA non-coding upstream 392493 28011684 ~ 28012804 (-)
G72652 NA non-coding upstream 448391 28067582 ~ 28068084 (-)
G72651 LOC108267776 non-coding upstream 449301 28068492 ~ 28069277 (-)
pcyt1aa pcyt1a,LOC108267677,LOC108430756,LOC103040438,LOC107709348,LOC107671662,LOC107559373 other downstream 29587 27547752 ~ 27555987 (-)
tsen15 tsen15 other downstream 101741 27474765 ~ 27483833 (-)
LOC113540508 LOC108268039 other downstream 152896 27415267 ~ 27432678 (-)
trnat-ugu_4 NA other downstream 189351 27396151 ~ 27396223 (-)
trnat-ugu_3 NA other downstream 190145 27395357 ~ 27395429 (-)
prkag2b LOC108267467,LOC108430764,LOC108434244 other upstream 396873 28016064 ~ 28041785 (-)
LOC117597043 NA other upstream 578800 28197991 ~ 28225603 (-)
trnas-uga_1 NA other upstream 616995 28236186 ~ 28236267 (-)
trnas-uga_2 NA other upstream 617533 28236724 ~ 28236805 (-)
LOC113540437 fam159a other upstream 1029133 28648324 ~ 28652425 (-)

Expression


Co-expression Network