etnppl (etnppl)


Basic Information

Item Value
gene id etnppl
gene name etnppl
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 19328031 ~ 19338707 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026937227.2
AcacgcgctctctctctctctctctctctctctctctctcactcactgcgagctgctgaattctctgCACTTTCCGAGCTGCTGCAATGGCAACTGAAATTTTTACTAAGCAGAAAACCATCGATCTGAGAAAGAAACACATTGGTCCCTCCTGCAAGGTTTTCTTCAGCCATGACCCTATCAAGATCGTCCGAGCCAGGGGTCAGTACATGTACAATGAAAAAGGCGAGCAGTACCTGGACTGCATCAACAATGTCGCCCACGtggGTCACAGCCACCCAGAAGTCGTCCATGCTGGAGCGAAGCAGATGGAGCTCTTGAACACTAACTCGCGCTTCCTCCATGACAACCTCGTCCAATACGCACAACGTCTCCAAGCCACGCTGCCTGAACAGCTCTCAGTCTGCTACTTTACCAACTCAGGCTCTGAGGCCAATGACCTGGCCTTAAGATTGGCTTGGCAGTACACTGGCCACAAAGACATCATCACATTGGACAATGCTTATCATGGTCATGTGTCATCACTTATTGATATCAGTCCCTACAAGTTTCACCAGCTGGGACAGTGTGAGCAAAGCCAACATGTACATGTGGCTCCAAGTCCAGACACATATAGAGGGAAATACAGGGAAGACCACGCAGACCCTGCTACTGCTTATGCAGATGAAGTTAAAGACATCATTGAAAAAGCTCATGCAAAAGGACACAAGATTGCTGCTTTCATTGCTGAATCACTGCAGAGTTGTGGAGGACAGGTCATTCCTCCAGTGGGCTACTTCCAGAAAGTGGCACAACACGTCAGAAATGCTGGGGGCGTCTTCATTGCTGATGAGGTTCAAGTCGGCTTTGGAAGGGTAGGCTCCCATTTCTGGGCTTTCCAGCTGCAAGGGGAAGACTTTATACCTGACATTGTCACTATGGGCAAACCGATTGGGAATGGACATCCAATGTCCTGTGTAGTGACCACCAGAGCGGTAGCTGAAGGCTTCATGTCATCTGGAATGGAGTACTTTAACACATTTGGTGGTAATCCTGTATCCTGTGCTATTGGGCTAGCTGTACTGGATGTGATTGAGAAAGAGGATCTCCAAGGCAATGCCCTGCGAGTAGGGAAATACCTGACGGACTTACTGGAGAAACTGAAAGAGAGACATCCCTTAGTGGGAGACGTCAGaggTTGTGGCCTTTTTGTTGGGGTGGAGCTGGTGAAAGATCGGCTTAAAAGAACCCCTGCAACAGCTGAAGCTCAGGATGTCATATACAGACTGAAGGATCAGCGGGTTTTATTAAGTGCAGATGGACCACACCGTAACGTCCTGAAGTTTAAACCACCCCTGTGCTTCTCCAGAGAGGATGCTGACTTGGCAGTTGGAAAAATTGAGCAGATTCTAACAGACCTTGAGAATGTTTTGGGCCTCCATATATCTGACAACACAGACACGGTAAATGCACAAAGCAAGCGCAAGGAGTCAGGCGAGGAAAATGGCCATGATATTCATTCAGGTGGCATCAGTGGCAAACATCACATAATTAAGACTAACAAAAGACGAAGAACATAACAAACCTTGTTCTTCttttaacattatattatatatctgtCCAAAGTCCAGCCTCAGGGCCAAATGCATCCTGTGGCTTCGCTCTTAAAATGTACGATAGGTGGCCTGCTAGCCAACACATAGTGGCCAACAAATTTTTATTGAGTGTTAACACAGTAAGCTAAATTGcaagagccttttttttctctgactacacttacaaattaatttactgaatGATATTTAGTCATGGGTACACACAAAAAGTGCAAAGTTAACAATGAGAAGGAGCGATTTCAAAAGAGCTGGAAACAAGAATACTTTTTCACAGAGAGCCATAGCAAATGTGTGTACCTCATATGTCTGAGACTGTTGCAGTAATTAAGGAATTTAATATGATGAGAGATTATTAAACAAATCATgagcaatgcaaaaaatattcagaGGATGGGAGGGCAGAGAAACTGAAGCAGCTGAAAGCTATCCTGGCAGACGCAACATCTTGTCAGAGCAAATAGGGCACAGAACATTACTAGAGATAATGAATAGCAATGCTTCCAACCACTAAGCATGGAAAACCTGTCATGAATTCTTGAGAGAGTCCTTAACTCAAGCAGTCAGTGTCATTTGTCCTAATAAGAAGCatgaatttatgaatattaTCTTGCGTGTCACAACTACAGCTGTCAGGTTATATCATACTGCAGTTATTCCACTAAAATTAAATTCACTATATTGgagctttaaaataatattttagtgaCCAGCCCTCAGATATTTTGATGTGGGGAGTCTAATCTGGCCCCTTATATATTAGTTatacattaacattatatatgAAACTTATGGATCAAGATCaatcttttgataattatttccatattttaatGGATTTATAACGTGCCTCATGATCTAAAAGTAAAGGGGGTgttattttgtatataattgctcacaatttttctttttgtcaggGAGTGTAAGTGGTGCTaactatttataatatttaatgatgCCATATTAAAACGTAACATCAGGGGGAAATGAGATTCCAAACCATGTTGAACTTAGAGGGTTTTCAATCATGTACAGTATTCTAAGTGCAAGAATATCTTTAACcacattttctaaaaataaaattcatacatAATGTGTCATGTAAAGATTGAATCGGGTGCCTAAATCAGCATCAAGCTGTAATGATGAACGTGTAGTTTTGCATTTCTacacaaattttttaaaaaacaggaaataggAGGGACAAAGTGCTAAAAAGCAATGCAATCAGTCGTGCAAAGTTCACACTGTTCTTTTACATGCAAACATTACACTGATGTATTAGGCAAGCGTGCTCCTCCGCATGCACTCGCTGAACACAGCCGCTGGTGCGTAAGCTGTTGACATGAGCACACACTGAAGTGAGTGCATTCTGCCACTTTCAGCATGCCCTCATATGATCAGAACAGCTTGTGAAACACTGGCCTGTCCAACTGTAATGGAGTGGAAAAGACCTTAAAATGTCCTGCATGGAGGCCACTCATGGTTGCACTTGGTTATCACAAAATATTAGTAAAACCATTTCCtatattttagattattatattctaattttgtgcaaaatataaatgtgatatGACAGGTAAAGTATTTAGTGATATTTTGTAGcgattaagtttaaaaaaaataaaaataaaaaatctcaaa

Function

symbol description
etnppl Predicted to enable ethanolamine-phosphate phospho-lyase activity; pyridoxal phosphate binding activity; and transaminase activity. Acts upstream of or within embryonic hemopoiesis. Predicted to be located in mitochondrion. Is expressed in intestinal bulb; liver; and yolk syncytial layer. Orthologous to human ETNPPL (ethanolamine-phosphate phospho-lyase).

NR:

description
ethanolamine-phosphate phospho-lyase

GO:

id name namespace
GO:0035162 embryonic hemopoiesis biological_process
GO:0005739 mitochondrion cellular_component
GO:0030170 pyridoxal phosphate binding molecular_function
GO:0008483 transaminase activity molecular_function
GO:0050459 ethanolamine-phosphate phospho-lyase activity molecular_function

KEGG:

id description
K14286 AGXT2L1, ETNPPL; ethanolamine-phosphate phospho-lyase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026937227.2 True 3239 mRNA 0.41 13 19328031 19338707

Neighbor

gene id symbol gene type direction distance location
LOC113540597 col25a1,LOC102793499 coding upstream 654 19170699 ~ 19327377 (+)
ppp1r15a NA coding upstream 374031 18951047 ~ 18954000 (+)
sod3a NA coding upstream 476451 18849165 ~ 18851580 (+)
gba3 LOC108267130,LOC108437095 coding upstream 897672 18426358 ~ 18430359 (+)
sec24d sec24d,LOC103036498,LOC107732696 coding upstream 1084234 18221624 ~ 18243797 (+)
trmt44 trmt44,LOC107710993 coding downstream 15673 19354380 ~ 19372755 (+)
gpr78b gpr78,LOC108267410,LOC103025717,LOC107554869,LOC107397001 coding downstream 49898 19388605 ~ 19393118 (+)
LOC113540663 cpz coding downstream 55448 19394155 ~ 19407627 (+)
LOC113540575 slc2a4,LOC100136445,LOC100136540 coding downstream 116319 19455026 ~ 19470962 (+)
LOC113540207 eif5a,LOC107691471,LOC106608670 coding downstream 142348 19481055 ~ 19485146 (+)
LOC113540244 NA non-coding upstream 205407 19120838 ~ 19122624 (+)
G66887 NA non-coding upstream 416634 18911057 ~ 18911397 (+)
G66888 NA non-coding upstream 417543 18909646 ~ 18910488 (+)
G66865 NA non-coding upstream 464614 18859042 ~ 18863417 (+)
G66855 NA non-coding upstream 494204 18828179 ~ 18833827 (+)
G67205 rpl34,LOC107573163,LOC107566275,LOC107681344 non-coding downstream 7137 19345844 ~ 19351904 (+)
G67208 NA non-coding downstream 34849 19373556 ~ 19375720 (+)
G67209 NA non-coding downstream 43846 19382553 ~ 19451392 (+)
G67227 LOC108267906 non-coding downstream 135788 19474495 ~ 19475474 (+)
G67236 h2afvb,H2AFZ,LOC103038819,LOC105895420,LOC101065890,LOC100694115 non-coding downstream 160502 19499209 ~ 19501228 (+)
G66864 NA other upstream 469379 18856456 ~ 18858652 (+)
G66492 LOC108267609,LOC108437090 other upstream 1119467 18197312 ~ 18208564 (+)
frem1a frem1 other upstream 1184400 18113433 ~ 18143631 (+)
ctdnep1b ctdnep1,ctdnep1b,ctdnep1a,LOC108413724,LOC107659132,LOC107679908,LOC107747382 other upstream 1317069 18000158 ~ 18010962 (+)
LOC113539940 NA other upstream 1707952 17609492 ~ 17620079 (+)
dock11 dock11,LOC107683516 other downstream 651977 19990684 ~ 20067220 (+)
fcer1g LOC100305060 other downstream 809088 20147795 ~ 20154777 (+)
G68232 LOC108267516 other downstream 1681551 21020258 ~ 21033753 (+)
plag1 plag1,LOC107570635 other downstream 1975511 21314218 ~ 21323967 (+)
mettl4 mettl4 other downstream 2290369 21629076 ~ 21640157 (+)

Expression


Co-expression Network