gpr25 (LOC108267152)


Basic Information

Item Value
gene id gpr25
gene name LOC108267152
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 33257229 ~ 33259292 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_026944648.2
GGTTTGCTTTGCCAGTCAGATGAGCACAGATGGCAAGCAGCACTGAGGTGGCATTCTTTCATACCACGATGGAAAATTTTATAGATGATCTCAACTTTTCTGACTATTACGAATTAAATGATACAGTGACTCCAACATCAGTCACTGCAGTGAAGGAGCAACTTCTCTCCATGTCTCACATCTATCTTCCCATTTTgtatttcatcattttctttGCTGGATTCACTGGAAACCTGTTTGTCATCATAGTTATTGGTAACAGGCACAAGAAGAATGCACGTCTGGTAGACACATTTGTGCTGAACCTTGCTCTAGCAGACCTGGTGTTTGTCTTCACTTTGCCCCTATGGGCCGTCTCAGCTGGACAACATGACCAGTGGCCCTTTGGGGAGCTGCTGTGCAAGATCAGCAGCTATATCATCGCAGTCAACCGCTTTTCCAACATTTTCTTTCTCACGTGCATGAGTGTGGATCGCTACCTTGCCATAGTGCGCCTCATGGACTCCCACTTTCTCCGGAGCAGTAAATGTATACATCTCACCTGTGGAGTGGTATGGGGATCGTCTCTAATCCTGGGTACACCGTCACTGGTTTATCGCAAGTTGACTGTTGAAAATAGTTCTTGTATAGATGACCTGGAGTCCTCCTTCTTCCAAAGTATGATTCTGCTGACAGGCTTTCTGACCTTTGTGCTGCCTGTGTTGGTTATCCTCCTGTGTTATGGCTCGATCATGGTCAAACTGCGGCACCACTGTGTCACTGCCGGAAATTCACGTGCTGAAGCCCGATGTCGCCACTCTTTCAAAATTGTTTTCACTATCATTATAGTCTTTCTGGTATCTTGGCTGCCCTACAATGTGTTAAGAACAATTCAAGTCATCTGCAAGATCAGTAATAACAAGCTGGATTATGACACCTACATATATTTGGCTAGAGGGCTCATCATCTCCTCCTGCCTGGCCTTCCTCAACAGTTGCCTGAATCCAGTCATTTACTTGTTCCTGGATAAGCATTTCAGACGCAGCGCAGCCGCACAGTGCAAGTTCTGCATGGGCAAGGGGGATATACAGCAGAGTTACGTATCCTCTAACTCAACTGCCTCAAATGGTATCTCAGAGAGCCTGGGAAGCACTGCAACCCGTGGCCGCGTCTTCTCCCTCACTCAGAAGAAATGAACTCACTCAGCCACATCTGTCCACAGGTTATAGCTTTACATGATTTtagctttattattaaatacagaaatatactcAAATGAattcttattatattattttatgaatgcattaatgGATTACATTTGCAGCAGGATGTGTTAATGCCATTGTGTTTGTGGGGTATtctaattaatttttaacaaCACTTTCttgacttttgtttttaaacagaaaGGTACTCCTCAAATATGtgccataaaatatttttcagtattttactCCTGCTTTTCTAAAATGGTATAGATTCAAAGAAgccaattatatattttatgaagtTGTCTACAGTGTCTTTATTTGTGCTCTGGCTGTCTGTTTTGCTCAACAGCTTATATTCCAATTGTTAGGAATGAAAATGCCCCCAACCATTTCCTTTAGATAAATCATTGCTCGAACTGTTTATCAGTAATTTCAACATGCCAGAGATCGAttttaataaatgcagaaatgaaTGCAATTGTACTACTTTCTATGTTGTTCCCTTTTATTAACATAgtcatatacatttttaaaaactaagattttttaaactattagatttaaaaataaacattactctttttttattactcttataactattttaaaatagtaaaCATTACTCTTTAATGCTTAATGTGCACATACTTCACaattaacaaaacatataaactaCAGTaatttaaatccattattattattatttttccatgcTCACTGATGCATTTTATCCATGTAAAATGTAGAatgtttttatgtgtattttttgtgtatttcctCTTTAAGTTCAACAATTTCAgtgatgtgtttatttgtgctcTGGAACCATTATGTATTCTGGCAATCTTGAGAAATAAAGtctaaaactgtt

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 25

GO: NA

KEGG:

id description
K08405 GPR25; G protein-coupled receptor 25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_026944648.2 True 2064 mRNA 0.38 1 33257229 33259292

Neighbor

gene id symbol gene type direction distance location
chd8 chd8,LOC108267737,LOC107738141,LOC107591376,LOC107704282 coding upstream 7570 33174474 ~ 33249659 (+)
LOC117597132 NA coding upstream 729569 32524877 ~ 32527660 (+)
LOC117596939 NA coding upstream 763605 32492958 ~ 32493624 (+)
LOC117596954 NA coding upstream 780466 32476272 ~ 32476763 (+)
LOC117597131 NA coding upstream 852128 32404548 ~ 32405101 (+)
G74750 NA non-coding upstream 108176 33148537 ~ 33149053 (+)
G74747 NA non-coding upstream 131345 33125668 ~ 33125884 (+)
G74686 NA non-coding upstream 232898 33023976 ~ 33024331 (+)
LOC117596970 NA non-coding upstream 330215 32926616 ~ 32927014 (+)
G74676 NA non-coding upstream 341256 32915540 ~ 32915973 (+)
mmp14b mmp14b,LOC108267723,LOC103041213,LOC108438939 other upstream 108798 33130043 ~ 33148431 (+)
LOC117597138 NA other upstream 509436 32745500 ~ 32747793 (+)
LOC117596925 NA other upstream 514092 32742265 ~ 32743137 (+)
LOC117597137 NA other upstream 520958 32721824 ~ 32736271 (+)
LOC117596943 NA other upstream 541706 32714954 ~ 32715523 (+)

Expression


Co-expression Network