dis3l2 (dis3l2)


Basic Information

Item Value
gene id dis3l2
gene name dis3l2
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 863378 ~ 886395 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034303471.1
CTTTAAACCCGGAAGTGTAAGTGTCCTTTTTTACATTGTTTGGTGTGAAAACGGTTGAGATTTGAAACAAACTTTAGCGGacctATGGATGAGATGATGGAGTCCTCCTGTAAACCGAGCGAAGCTGCAGAGAAAAAGCAAGGCCAGAACCGGAGCAGAACTCCTAAAGCTGCTAGAACTCCTCAGCAGAACGGTCCGTCTGGGTCAGACACGGGACGCACAGAGAACCAGCCCGAACCTGACGTGAGGGCCAGGAGAGGAGACCAGAACACTACGGATTCAGAAAATCACCACACTGATACGGCTAAACGGCGACGCCATAAACAACGCAGGAACAAGCAGGCTTCTGGAGGAGCAGAGACAGGAACTGCTAAACATCTAACACACACGGCTCCAAACCagcaagagaaaaaacacaaacacggACACGTGAACACAAACACGGACACGGGCACACCCCCGCTCATCGACGACTCCACGACTCCcgatgatggaggaggagagaagcagaagaagaagaagaagaagcagaagaaatcCAAAGGGAACACAGAAGATAAATCGGTGAAACCGTGTGAGTCTGGAGCTGTGGAGAAACCCAAAACtccactgaaaaacacaaaaactcaaGctgtgagtaTGAGCCCGAGCCCAGcgggacagatggacagagagaacaGTCGGAGGaacagagggaggaagagaCGCCTGTATGAGGACTACATGTCCATTAAAGACGTATCTGATGGACTGAAGAGAGGACAGCTcatacagGGTGCATTGAGGATAAACCCAAGGAAATATCACGAAGCGTTCATTCCCTCTCCTGACGGGTCGGCGGACATTTTCCTGGACGGGATGGTGGCACGGAATCGAGCTCTGAATGGAGACGTGGTGGTGGTGAAGCTCCTCCCTGCAGATCAGTGGAAGGTGTTGAACGGGGACGAGAGCGAACAGACGAGTGTGGAGAAAGAGCGACAGAGCGAGTCTGTCCCTGACGTCACAGTAGAGGCTCAGTAtggtgaggatgaggaggaggaggaggacgaagAGCTCAGTAAGAAAATGGAGGCGGCCACTCTTCAggataaagttCGACCCACAGCAGATACTCTCAGCGCCTCAGACAGAAAAGTTCAGCGCACCGCCAAGGTGGTGTACATCGTGGAGCAGAAGCACTCGAGGGCAGTGTCAGGGTTTATTAAGCTCATCCCTGACAAGCCCTTCGCCCTGTTCTCCCCCTCGGACCACCGAGTCCCCCGAGTGAACGTCCCGCTCTCAGACTGTCCTGCAGATTTCCCCTCGCGCCATACTGACTATGCCAACACACTCTTCATCTGCAGGATCACACACTGGCCCCCAGACAGCCCCTTCGCCCAagggcAGTTGATGAAGTCGTTAGGTCAGGCGGGAGTCATCGAGCCGGAAACAGAGGCCATGTTGATGGAGTATGATGTGGATTATTCAGAGTTTACAGATGAAGTGTTAGTGTGTCTACCACAGGGTCGACCCTGGACCATCCCACCTGATGAGCTGAGAAAGAGGCGGGACCTCAgGAAGGAATGCATATTCACGATTGATCCAGCCACAGCCCGAGACCTGGATGACGCTCTGTCCTGTAAACAACTTCCTGATGGTAACTTTGAAGTGGGCGTGCACATAGCGGACGTGAGTTACTTCTTGGAGGAGGGAAGTGCTCTGGATTACACAGCGAGCAGGAGAGCCACCAGTGTGTACCTCATCCAGAAGgtaatTCCGATGTTGCCGCGTCTCCTGTGTGAAGAGTTGTGTAGTTTAAATCCTCAAACTGATCGTTTAACATTCTCCGTCATCTGGACCTTAACACCTGAGGggaagatcctGAGTGAGTGGATGGGCCGCTCAGTGATCCGCTCATGTGTGAAGCTGAGTTATGATCACGCTCAGAGCATGATCAACTCGCCCCATAACGAGTTTGGAGCAGATGAACTCCCCCCAGTCTCCCCTGAACACTCAGTGCAGAGCATCCTCCAGGCCGTCCTGCACCTGCACACCATCGCCACTCACCTGCGCGCCCAACGCTTCAGGGGCGGAGCCTTACGTCTCGACCAGaTGAAGCTGGCGTTTACTCTGGACTCTGGGTCAGGAATGCCTCAGGGCTGCTACATCTACCAGTACAGAGACAGCAACAAGTTGGTGGAGGAGTTCATGTTGTTGGCCAACATGGCTGTAGCTCATCATATTTACCGCTCGAACCCTGAGCTCGCGCTGCTGCGGCGTCATGCAGCCCCTCAGAGCCGTCTGATGGAGGCGCTACAGGAGCTGTGTGATCACATCGGCCTCAACATCGACATGAGCTCGGCTGGATCCCTGCATAGGAGTCTGGAGGAGGCAGTTGGAGATGACGAGTACAGCGCAGCCAGGAAGTCTGTACTCACACACCTGTGTGCCAGACCCATGCAGatggcgGTGTATTTCTGTACAGGAGTTCTGCGGGATGAGAAGTTGTTCCATCACTACGCTCTGAACGTACcgctctacacacacttcacctctCCCATCCGCCGCTACGCCGACGTCATCGTCCACCGCCTGCTGGCCGCTTCACTcaagtgtgGACCTCGTGTGCATCTCGCCCAAGATGAAGTGGAGAAGCAGGCCTCTCACTGTAACGATAAGAAGACAGCGTCCAAGAGGGTTCAGGAGATGAGCACAGAGTTGTTCTTCAGCGTCTTCGtcagggagtgtgggCCTCTGGACTCCAAGGCGATGGTGATGGGGATGCTGGATAAATCCTTTGATGTGTTGGTGCTGGACTATGGAGTTCAGAAGAGGATCTACTGTAAcGCCATTGAGGGTCTGCAGTCGTTTAATTTCCGTAAAGTCGGTAAACGGCCTGAGATGACCCTGGTTTGGACTCCGAACGAACTAGAAGATGAAACAGTTACACAGgagATCTCCCTGTTCTCCGTGGTGGATGTGCGGCTGACTTCTGGTGAAGGTCCTCTCAAATACACGGCAGTACTGATgagacccacacacacccagtcctgaacacacacacacacacacacagtcctgaacacacacacacacacacacacacacacacacccagtcctgaacaca
>XM_034303472.1
TAACCACAGAACTTCAACTCCCAGAATGCAACTGGGCGAGTTGACCTTTAAACCCGGAAGTacctATGGATGAGATGATGGAGTCCTCCTGTAAACCGAGCGAAGCTGCAGAGAAAAAGCAAGGCCAGAACCGGAGCAGAACTCCTAAAGCTGCTAGAACTCCTCAGCAGAACGGTCCGTCTGGGTCAGACACGGGACGCACAGAGAACCAGCCCGAACCTGACGTGAGGGCCAGGAGAGGAGACCAGAACACTACGGATTCAGAAAATCACCACACTGATACGGCTAAACGGCGACGCCATAAACAACGCAGGAACAAGCAGGCTTCTGGAGGAGCAGAGACAGGAACTGCTAAACATCTAACACACACGGCTCCAAACCagcaagagaaaaaacacaaacacggACACGTGAACACAAACACGGACACGGGCACACCCCCGCTCATCGACGACTCCACGACTCCcgatgatggaggaggagagaagcagaagaagaagaagaagaagcagaagaaatcCAAAGGGAACACAGAAGATAAATCGGTGAAACCGTGTGAGTCTGGAGCTGTGGAGAAACCCAAAACtccactgaaaaacacaaaaactcaaGctgtgagtaTGAGCCCGAGCCCAGcgggacagatggacagagagaacaGTCGGAGGaacagagggaggaagagaCGCCTGTATGAGGACTACATGTCCATTAAAGACGTATCTGATGGACTGAAGAGAGGACAGCTcatacagGGTGCATTGAGGATAAACCCAAGGAAATATCACGAAGCGTTCATTCCCTCTCCTGACGGGTCGGCGGACATTTTCCTGGACGGGATGGTGGCACGGAATCGAGCTCTGAATGGAGACGTGGTGGTGGTGAAGCTCCTCCCTGCAGATCAGTGGAAGGTGTTGAACGGGGACGAGAGCGAACAGACGAGTGTGGAGAAAGAGCGACAGAGCGAGTCTGTCCCTGACGTCACAGTAGAGGCTCAGTAtggtgaggatgaggaggaggaggaggacgaagAGCTCAGTAAGAAAATGGAGGCGGCCACTCTTCAggataaagttCGACCCACAGCAGATACTCTCAGCGCCTCAGACAGAAAAGTTCAGCGCACCGCCAAGGTGGTGTACATCGTGGAGCAGAAGCACTCGAGGGCAGTGTCAGGGTTTATTAAGCTCATCCCTGACAAGCCCTTCGCCCTGTTCTCCCCCTCGGACCACCGAGTCCCCCGAGTGAACGTCCCGCTCTCAGACTGTCCTGCAGATTTCCCCTCGCGCCATACTGACTATGCCAACACACTCTTCATCTGCAGGATCACACACTGGCCCCCAGACAGCCCCTTCGCCCAagggcAGTTGATGAAGTCGTTAGGTCAGGCGGGAGTCATCGAGCCGGAAACAGAGGCCATGTTGATGGAGTATGATGTGGATTATTCAGAGTTTACAGATGAAGTGTTAGTGTGTCTACCACAGGGTCGACCCTGGACCATCCCACCTGATGAGCTGAGAAAGAGGCGGGACCTCAgGAAGGAATGCATATTCACGATTGATCCAGCCACAGCCCGAGACCTGGATGACGCTCTGTCCTGTAAACAACTTCCTGATGGTAACTTTGAAGTGGGCGTGCACATAGCGGACGTGAGTTACTTCTTGGAGGAGGGAAGTGCTCTGGATTACACAGCGAGCAGGAGAGCCACCAGTGTGTACCTCATCCAGAAGgtaatTCCGATGTTGCCGCGTCTCCTGTGTGAAGAGTTGTGTAGTTTAAATCCTCAAACTGATCGTTTAACATTCTCCGTCATCTGGACCTTAACACCTGAGGggaagatcctGAGTGAGTGGATGGGCCGCTCAGTGATCCGCTCATGTGTGAAGCTGAGTTATGATCACGCTCAGAGCATGATCAACTCGCCCCATAACGAGTTTGGAGCAGATGAACTCCCCCCAGTCTCCCCTGAACACTCAGTGCAGAGCATCCTCCAGGCCGTCCTGCACCTGCACACCATCGCCACTCACCTGCGCGCCCAACGCTTCAGGGGCGGAGCCTTACGTCTCGACCAGaTGAAGCTGGCGTTTACTCTGGACTCTGGGTCAGGAATGCCTCAGGGCTGCTACATCTACCAGTACAGAGACAGCAACAAGTTGGTGGAGGAGTTCATGTTGTTGGCCAACATGGCTGTAGCTCATCATATTTACCGCTCGAACCCTGAGCTCGCGCTGCTGCGGCGTCATGCAGCCCCTCAGAGCCGTCTGATGGAGGCGCTACAGGAGCTGTGTGATCACATCGGCCTCAACATCGACATGAGCTCGGCTGGATCCCTGCATAGGAGTCTGGAGGAGGCAGTTGGAGATGACGAGTACAGCGCAGCCAGGAAGTCTGTACTCACACACCTGTGTGCCAGACCCATGCAGatggcgGTGTATTTCTGTACAGGAGTTCTGCGGGATGAGAAGTTGTTCCATCACTACGCTCTGAACGTACcgctctacacacacttcacctctCCCATCCGCCGCTACGCCGACGTCATCGTCCACCGCCTGCTGGCCGCTTCACTcaagtgtgGACCTCGTGTGCATCTCGCCCAAGATGAAGTGGAGAAGCAGGCCTCTCACTGTAACGATAAGAAGACAGCGTCCAAGAGGGTTCAGGAGATGAGCACAGAGTTGTTCTTCAGCGTCTTCGtcagggagtgtgggCCTCTGGACTCCAAGGCGATGGTGATGGGGATGCTGGATAAATCCTTTGATGTGTTGGTGCTGGACTATGGAGTTCAGAAGAGGATCTACTGTAAcGCCATTGAGGGTCTGCAGTCGTTTAATTTCCGTAAAGTCGGTAAACGGCCTGAGATGACCCTGGTTTGGACTCCGAACGAACTAGAAGATGAAACAGTTACACAGgagATCTCCCTGTTCTCCGTGGTGGATGTGCGGCTGACTTCTGGTGAAGGTCCTCTCAAATACACGGCAGTACTGATgagacccacacacacccagtcctgaacacacacacacacacacacagtcctgaacacacacacacacacacacacacacacacacccagtcctgaacaca
>XM_034303473.1
CCCAGTTACAGGAAAGTGTTGTGTGTGGAGTGTTTATGAGCTTTAATCAGAAGAGGAGGAGTTTAATCCCAGGCTGCTGAGCTCACTGACTGCGCATTAGCTCTGTCATacctATGGATGAGATGATGGAGTCCTCCTGTAAACCGAGCGAAGCTGCAGAGAAAAAGCAAGGCCAGAACCGGAGCAGAACTCCTAAAGCTGCTAGAACTCCTCAGCAGAACGGTCCGTCTGGGTCAGACACGGGACGCACAGAGAACCAGCCCGAACCTGACGTGAGGGCCAGGAGAGGAGACCAGAACACTACGGATTCAGAAAATCACCACACTGATACGGCTAAACGGCGACGCCATAAACAACGCAGGAACAAGCAGGCTTCTGGAGGAGCAGAGACAGGAACTGCTAAACATCTAACACACACGGCTCCAAACCagcaagagaaaaaacacaaacacggACACGTGAACACAAACACGGACACGGGCACACCCCCGCTCATCGACGACTCCACGACTCCcgatgatggaggaggagagaagcagaagaagaagaagaagaagcagaagaaatcCAAAGGGAACACAGAAGATAAATCGGTGAAACCGTGTGAGTCTGGAGCTGTGGAGAAACCCAAAACtccactgaaaaacacaaaaactcaaGctgtgagtaTGAGCCCGAGCCCAGcgggacagatggacagagagaacaGTCGGAGGaacagagggaggaagagaCGCCTGTATGAGGACTACATGTCCATTAAAGACGTATCTGATGGACTGAAGAGAGGACAGCTcatacagGGTGCATTGAGGATAAACCCAAGGAAATATCACGAAGCGTTCATTCCCTCTCCTGACGGGTCGGCGGACATTTTCCTGGACGGGATGGTGGCACGGAATCGAGCTCTGAATGGAGACGTGGTGGTGGTGAAGCTCCTCCCTGCAGATCAGTGGAAGGTGTTGAACGGGGACGAGAGCGAACAGACGAGTGTGGAGAAAGAGCGACAGAGCGAGTCTGTCCCTGACGTCACAGTAGAGGCTCAGTAtggtgaggatgaggaggaggaggaggacgaagAGCTCAGTAAGAAAATGGAGGCGGCCACTCTTCAggataaagttCGACCCACAGCAGATACTCTCAGCGCCTCAGACAGAAAAGTTCAGCGCACCGCCAAGGTGGTGTACATCGTGGAGCAGAAGCACTCGAGGGCAGTGTCAGGGTTTATTAAGCTCATCCCTGACAAGCCCTTCGCCCTGTTCTCCCCCTCGGACCACCGAGTCCCCCGAGTGAACGTCCCGCTCTCAGACTGTCCTGCAGATTTCCCCTCGCGCCATACTGACTATGCCAACACACTCTTCATCTGCAGGATCACACACTGGCCCCCAGACAGCCCCTTCGCCCAagggcAGTTGATGAAGTCGTTAGGTCAGGCGGGAGTCATCGAGCCGGAAACAGAGGCCATGTTGATGGAGTATGATGTGGATTATTCAGAGTTTACAGATGAAGTGTTAGTGTGTCTACCACAGGGTCGACCCTGGACCATCCCACCTGATGAGCTGAGAAAGAGGCGGGACCTCAgGAAGGAATGCATATTCACGATTGATCCAGCCACAGCCCGAGACCTGGATGACGCTCTGTCCTGTAAACAACTTCCTGATGGTAACTTTGAAGTGGGCGTGCACATAGCGGACGTGAGTTACTTCTTGGAGGAGGGAAGTGCTCTGGATTACACAGCGAGCAGGAGAGCCACCAGTGTGTACCTCATCCAGAAGgtaatTCCGATGTTGCCGCGTCTCCTGTGTGAAGAGTTGTGTAGTTTAAATCCTCAAACTGATCGTTTAACATTCTCCGTCATCTGGACCTTAACACCTGAGGggaagatcctGAGTGAGTGGATGGGCCGCTCAGTGATCCGCTCATGTGTGAAGCTGAGTTATGATCACGCTCAGAGCATGATCAACTCGCCCCATAACGAGTTTGGAGCAGATGAACTCCCCCCAGTCTCCCCTGAACACTCAGTGCAGAGCATCCTCCAGGCCGTCCTGCACCTGCACACCATCGCCACTCACCTGCGCGCCCAACGCTTCAGGGGCGGAGCCTTACGTCTCGACCAGaTGAAGCTGGCGTTTACTCTGGACTCTGGGTCAGGAATGCCTCAGGGCTGCTACATCTACCAGTACAGAGACAGCAACAAGTTGGTGGAGGAGTTCATGTTGTTGGCCAACATGGCTGTAGCTCATCATATTTACCGCTCGAACCCTGAGCTCGCGCTGCTGCGGCGTCATGCAGCCCCTCAGAGCCGTCTGATGGAGGCGCTACAGGAGCTGTGTGATCACATCGGCCTCAACATCGACATGAGCTCGGCTGGATCCCTGCATAGGAGTCTGGAGGAGGCAGTTGGAGATGACGAGTACAGCGCAGCCAGGAAGTCTGTACTCACACACCTGTGTGCCAGACCCATGCAGatggcgGTGTATTTCTGTACAGGAGTTCTGCGGGATGAGAAGTTGTTCCATCACTACGCTCTGAACGTACcgctctacacacacttcacctctCCCATCCGCCGCTACGCCGACGTCATCGTCCACCGCCTGCTGGCCGCTTCACTcaagtgtgGACCTCGTGTGCATCTCGCCCAAGATGAAGTGGAGAAGCAGGCCTCTCACTGTAACGATAAGAAGACAGCGTCCAAGAGGGTTCAGGAGATGAGCACAGAGTTGTTCTTCAGCGTCTTCGtcagggagtgtgggCCTCTGGACTCCAAGGCGATGGTGATGGGGATGCTGGATAAATCCTTTGATGTGTTGGTGCTGGACTATGGAGTTCAGAAGAGGATCTACTGTAAcGCCATTGAGGGTCTGCAGTCGTTTAATTTCCGTAAAGTCGGTAAACGGCCTGAGATGACCCTGGTTTGGACTCCGAACGAACTAGAAGATGAAACAGTTACACAGgagATCTCCCTGTTCTCCGTGGTGGATGTGCGGCTGACTTCTGGTGAAGGTCCTCTCAAATACACGGCAGTACTGATgagacccacacacacccagtcctgaacacacacacacacacacacagtcctgaacacacacacacacacacacacacacacacacccagtcctgaacaca

Function

symbol description
dis3l2 Predicted to enable 3'-5'-exoribonuclease activity. Acts upstream of or within pronephros development. Predicted to be located in cytoplasm. Predicted to be part of exosome (RNase complex). Predicted to be active in P-body. Is expressed in pronephros. Human ortholog(s) of this gene implicated in Perlman syndrome and nephroblastoma. Orthologous to human DIS3L2 (DIS3 like 3'-5' exoribonuclease 2).

NR:

description
DIS3-like exonuclease 2

GO: NA

KEGG:

id description
K18758 DIS3L2; DIS3-like exonuclease 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034303471.1 False 3108 mRNA 0.53 21 863378 886350
XM_034303472.1 False 3089 mRNA 0.54 21 863378 886395
XM_034303473.1 True 3137 mRNA 0.53 21 863378 886251

Neighbor

gene id symbol gene type direction distance location
LOC117597014 NA coding downstream 6178 848073 ~ 857200 (-)
LOC117597015 NA coding downstream 143771 710359 ~ 719607 (-)
LOC117597018 NA coding downstream 159000 700049 ~ 704378 (-)
LOC117597016 NA coding downstream 541689 303683 ~ 321689 (-)
LOC113525282 LOC108267103 coding downstream 590758 262446 ~ 272620 (-)
LOC113524111 LOC108267115,LOC108415103 coding upstream 38639 925034 ~ 933915 (-)
LOC113524137 LOC108267904 coding upstream 50765 937160 ~ 942590 (-)
LOC113524140 NA coding upstream 58649 945044 ~ 961033 (-)
LOC113524120 NA coding upstream 80635 967030 ~ 981643 (-)
higd1a higd1a,LOC108268302,LOC108442768,LOC107671688 coding upstream 99695 986090 ~ 992953 (-)
G57742 NA non-coding downstream 1941 857747 ~ 861437 (-)
G57745 NA non-coding downstream 17362 507094 ~ 846016 (-)
G57850 NA non-coding downstream 21717 827321 ~ 841661 (-)
G57816 NA non-coding downstream 36794 544163 ~ 826584 (-)
G57848 NA non-coding downstream 37514 822250 ~ 825864 (-)
G57861 NA non-coding upstream 23122 909517 ~ 910029 (-)
G57877 NA non-coding upstream 126519 1012914 ~ 1013189 (-)
LOC117596994 NA non-coding upstream 152630 1039025 ~ 1040876 (-)
G57895 NA non-coding upstream 188826 1075221 ~ 1075426 (-)
G57896 NA non-coding upstream 191296 1077691 ~ 1077907 (-)
G57733 NA other downstream 6426 300980 ~ 856952 (-)
G57838 NA other downstream 117347 683488 ~ 746031 (-)
G57740 NA other downstream 128607 733555 ~ 734771 (-)
G57830 NA other downstream 249135 612243 ~ 614243 (-)
LOC117597012 NA other downstream 365815 347059 ~ 497563 (-)
G57868 NA other upstream 99516 985911 ~ 1048841 (-)
LOC117597039 NA other upstream 123830 1010225 ~ 1029025 (-)
G58190 NA other upstream 805931 1692326 ~ 1692997 (-)
G58534 NA other upstream 1184629 2071024 ~ 2104011 (-)
LOC113523983 NA other upstream 1318157 2204552 ~ 2222099 (-)

Expression


Co-expression Network