Item | Value |
---|---|
gene id | LOC117597140 |
gene name | NA |
gene type | coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047598.1 |
NCBI id | CM018544.1 |
chromosome length | 33267568 |
location | 32823558 ~ 32825567 (-) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_034303863.1 | True | 942 | mRNA | 0.41 | 3 | 32823558 | 32825567 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
nmnat2 | nmnat2,LOC107658365,LOC107563562 | coding | downstream | 1096006 | 31710064 ~ 31727552 (-) |
LOC113540064 | NA | coding | downstream | 1278924 | 31538539 ~ 31544634 (-) |
psmb5 | psmb5,LOC107668975,LOC108438927,LOC107706341,LOC106569426 | coding | downstream | 1290300 | 31528370 ~ 31533258 (-) |
LOC113540461 | LOC108267708,LOC107591395 | coding | downstream | 1321180 | 31379473 ~ 31502378 (-) |
LOC113540063 | LOC108267709 | coding | downstream | 1459287 | 31360647 ~ 31364271 (-) |
LOC117596924 | NA | coding | upstream | 9472 | 32835039 ~ 32835722 (-) |
LOC117596934 | NA | coding | upstream | 18534 | 32844101 ~ 32845270 (-) |
LOC117597141 | NA | coding | upstream | 147218 | 32972785 ~ 32977700 (-) |
LOC117597142 | NA | coding | upstream | 170789 | 32996356 ~ 32996892 (-) |
LOC117597007 | NA | coding | upstream | 207451 | 33033018 ~ 33033661 (-) |
LOC113540133 | NA | non-coding | downstream | 7277 | 32815429 ~ 32816281 (-) |
LOC117597139 | NA | non-coding | downstream | 11823 | 32810432 ~ 32811735 (-) |
LOC117596923 | NA | non-coding | downstream | 13262 | 32809596 ~ 32810296 (-) |
LOC117596938 | NA | non-coding | downstream | 19336 | 32803554 ~ 32804222 (-) |
LOC117596927 | NA | non-coding | downstream | 45760 | 32776966 ~ 32777798 (-) |
LOC117596967 | NA | non-coding | upstream | 24360 | 32849927 ~ 32851375 (-) |
G74702 | NA | non-coding | upstream | 36640 | 32862207 ~ 32862659 (-) |
LOC117596966 | NA | non-coding | upstream | 46179 | 32871746 ~ 32873023 (-) |
G74717 | NA | non-coding | upstream | 199854 | 33025421 ~ 33025846 (-) |
G74720 | NA | non-coding | upstream | 205475 | 33031042 ~ 33031426 (-) |
LOC117596929 | NA | other | downstream | 158138 | 32661892 ~ 32665420 (-) |
G74644 | NA | other | downstream | 179024 | 32644024 ~ 32644534 (-) |
LOC117596950 | NA | other | downstream | 189847 | 32633213 ~ 32633711 (-) |
LOC117596946 | NA | other | downstream | 619653 | 32203394 ~ 32203905 (-) |
LOC117597125 | NA | other | downstream | 645434 | 32175807 ~ 32178124 (-) |
G74703 | NA | other | upstream | 40379 | 32865946 ~ 32868466 (-) |
LOC117597171 | NA | other | upstream | 120567 | 32946134 ~ 32947158 (-) |
LOC117597170 | NA | other | upstream | 124267 | 32949834 ~ 32950494 (-) |
LOC117597177 | NA | other | upstream | 145437 | 32971004 ~ 32971513 (-) |
LOC117597009 | NA | other | upstream | 209336 | 33034903 ~ 33042101 (-) |