adam19a (adam19a,LOC108267694,LOC108428568,LOC107708434)


Basic Information

Item Value
gene id adam19a
gene name adam19a,LOC108267694,LOC108428568,LOC107708434
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 14686254 ~ 14761565 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034303978.1
tgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtagcgggTGACGCGCTCTGCTCTGCGGGGTTACACGCCAGTCTCCAGTCACGCGTGTGCGTTAAACCTCTACTCGGCATGGCTTTCTCTCCTCTTGGAGCTCTACATTAGATCCATTTCTAGTTTTCTCTCACACCGGCGGggctgagagtgagagagagagagagagagagaggagagagagagagagagagagaggagacagaggagCAGTCCGCTACACGGAGACCGGAGCAGGCATGTATACCAAACACAGGCAGAAAAAGCGACTTGTCCTGTCGGCACAAAACGCGCGCGCTGTCTTGCCTCTTCTGCTCGTGAGCAGTTTATTAGGACCAGCGGACGCTAATCTCCGGGAAGGAGCATGGAAGGAGCGAGGACAGAAAGTGACGGCTCACTGGATCCCCCACACCACGGTACACAAAGACCCAGGAACGACTTCGCAGGATCAGTTTCCAGAGAGGGGAGAGATTCTTGTCTCAGCAGCGGACCTGGAGCTAATTCTAGAAGTGGAACGTaatcaggAACTTCTGGCTAAAGACTTCACTGAGACTCACTATGAAGACAGCCGGCCAGTTACCTATACTAACGGTCACAGTGATCATCATTGCTTCTATCATGGAAGTGTTAAGAACCATTCCTCTTCCTGGGTTGCTCTAAGCACATGCTCTGGAGTGAGGGGCCTCATTGTGCTGAACTCCAGTGACACTTACTACTTAGAGCCAGTAGAAGGGCAAGAGATTCTCCACCACGTCTTCTATCACACAGACGACCTGCCAATTAAAGGTGGTACATGTGGACACGGTCATGAAACTGGACATAAAGGCCTTCTCAGCGGTCTCCTTAAACCTTTGCATCAAAGGGTGAAACGAAATGCCTGGGGCACAACTAAGTACATGGAGCTTTATATAGTTGCTGACAACACACTGTACAGAAAGCAAAACAAGGACCTTGAAAAAACTAAACGGAGAATAATGGAAATTGCCAATTACGTCGATAAGttttACAGAGCTCTGAATATCCGGGTGCCTCTGATTGGTCTAGAGGTGTGGACAGACCGTGATCAGTGCATTATCAACGAAGAGCCCAACGCCACTCTGTGGTCCTTCCTGCAGTGGAGACAGAAGCTCAAGTCCCGCAAGAAACACGACAACGCACAACTTCTCACGGGGGTGATATTCAAGGGCACCACTATTGGCATGGCTCCCCTTGAAGGCATGTGCAGTCATGAAAATTCTGGCGGCATTAATGTGGATCATTCGGATTTGCCCATTGGGGCGGCTGCCACCATGGCTCATGAGATTGGCCATAACTTTGGCATGAGCCATGACCATGAAGGTTGCTGTGTGGAAGCCACAGCCGAGCAGGGAGGCTGCGTGATGGCAGCAGCTACGGGGCATCCGTTCCCTAAAGTCTTCAGCCGCTGTAGCAAGAAGGACCTGGATAACTACTTCCAGAAAGGAGGCGGGATGTGCCTGTTCAACATGCCCAACATGAAGGACCTGGTGGGGGGGAAGAGGTGCGGGAATGGCTTTGTAGAGGAAGGGGAGGAATGTGACTGCGGAGAACCTGAGGAATGTACGAATGACTGCTGCCATGCCAGTAACTGCACTCTGAAGCAGGACGCACAGTGTGCCCACGGCGTTTGCTGTGAAGGCTGCAAGCTGAAGCAGGCAGGTACGATGTGCCGTAGTGCAGCTGGCTCATGTGACCTCCCCGAGTACTGCACGGGTGGATCTCCCTACTGCCCATCTAACGTTTACCTCCTGGATGGATCCACATGCCAGTACGGCCACGCTTACTGCTATAACGGCATGTGCCTCACTCACGAGCAACAGTGCCTGCAGCTGTGGGGCTACgGTGCACGGCCTGCACATGATGCATGTTTCCAGGATGTCAATGCAGCAGGAAACGCTTTCGGAAACTGCGGCAAGGACGCACATGGCAATTATGTCAAGTGTGAGAAAAGTGATGCCAAATGTGGGAAGATCCAGTGCCACAGCGCCGCCAAAAAGCCAAAGGGCACTAACGCCGTGTCCATCGACACCACCATCCGCACAGATGGCATCGAGGTGAAATGCCGTGGCACATATGTGTACAGCACTCAGGACGGGCAGGGGGACCTTCCTGATCCTGGCCTCGTCATGACTGGCACCAAGTGTGGAGAGGGCAAGGTGTGCAAGGATCGTCGTTGTCAAAATGCTTCTTTCACCGAGCTGGAGGCCTGCATTGCCCGTTGCAATGGTCATGGGGTGTGTAACAGCAACAGTAACTGCCACTGTAACCGAGGCTGGGCGCCACCCTTTTGTGATAAACCAGGGCTGGGAGGCAGCGTGGACAGTGGACCGGTGCAGTATGACAGCCAGGTGGGGCTAGTTGTCGGCCTGCTCTTTGCTTTTCTGGTGTTGCTCCCTGCTGTTCTCATCGCCTTTTACTGCATCAAAATCAAGACCTCCTATTATCACAAATGGCTCTCACAGAGGGAGAAGAGCAAGGCTAACAACAGACATGAAAATTCCAAGGGGAAGAGTGGACACTTGAACCCAGCTTTCCATCTGAAGGTAGTGGGACCGTCCAACAAAAGCGCCAATCTTAAGCTACCTCATACAAGTAAGGAAGTGCTCCCTCTGCGACCAGGCCCCGCCTCCAATGGCACCCAGCCGGTCAACATTGTCCGTCCCCTCCGGCCCGCCCCCTCCCCCCACCTACGTGATGTCAAAGTGCCTCGGCCTCCTCCTCCCGTCAGCAAACCGCTGGAGGAAGCCAAGTGTAGTCCTACTGCTGCCAAACTCAGCCCTCCCAAGAAACCCCTGCCCCTCAACCCCACACGCAGCCCACTGATGGCATCAGAAGTCCAGCCGAAGCCTTCCCCCACACCCCCACAGAGGCCTCTCCCTGTGAGCCCCAGCCGCGGAGCCCAGGCCAAACCTTCCGGTGGAGCCGGGGGGTTGCTGGTGATGATGCCCTCTGCGGTGGGCCCCAAGCCTGTGGGCAAGGTCACCGCCATTCCTCCTCTCAGAGCACTCAGACCTGTTCCAGGACCCAAACCAAACACAGTCTCGCAGTCCCCTTTTCGAAAATGACCTTCACAGGATCAACTTTAAAGACAACAGCCAGCCTATTTGCACTATATAAAGGCCTTCATTGGGAGATTTGTAATTTTGTGGAAAAGCAGGGGACAAATGTACGGTGCTAAGGCCGGGACATTCTAGGCCTCGCTTATTTAAGCCTGAGTACAATCCAGCCCAGTGTCCGAGGGGACCGGATTTTGCATGGATCAGAATGCAGATTTAGACAAGATGCTTCGTATGGGGCATCACATTGCCAaaaccttgattttttttaactttacagtTTTCTTGTATgaagtgttgttgttgtgttatgtCATTGTcgtgtttacatttttttattactattattaattgTGTGTTAATTTGCCAAAGAATTTATGTTTGAATGTCAATCTAATGTGTCCTTTGCTGTAcgtatttttgcatttgttataTAAAATGCACCATtataggtttttattaaaaactgtgTTGTCGTA

Function

symbol description
adam19a Predicted to enable metalloendopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in asthma; chronic obstructive pulmonary disease; and rhinitis. Orthologous to several human genes including ADAM33 (ADAM metallopeptidase domain 33).

NR:

description
PREDICTED: disintegrin and metalloproteinase domain-containing protein 33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034303978.1 True 3586 mRNA 0.52 23 14686254 14761565

Neighbor

gene id symbol gene type direction distance location
LOC113540153 nwd2,LOC107661962 coding upstream 63730 14576397 ~ 14622524 (+)
LOC113540157 LOC108267639,LOC108428574,LOC101077706 coding upstream 306703 14356048 ~ 14379551 (+)
ppp1r14bb ppp1r14b,ppp1r14bb,LOC108268202,LOC107583286,LOC107721662,LOC107661967 coding upstream 432364 14229973 ~ 14253890 (+)
slc8a4b slc8a4b,LOC108267603,LOC108428577,LOC107721660,LOC107583282,LOC107661969 coding upstream 534965 14092494 ~ 14151289 (+)
hspa12b hspa12b,LOC107697252,LOC107721672,LOC107691462,LOC107744271,LOC107571934 coding upstream 606218 14064494 ~ 14080036 (+)
paqr9 paqr9 coding downstream 62537 14824102 ~ 14829911 (+)
zmp:0000000660 arap2 coding downstream 127735 14889300 ~ 14968601 (+)
cckar cckar coding downstream 1142790 15904355 ~ 15916921 (+)
plaa plaa,LOC107549730,LOC107661955,LOC107660709 coding downstream 1230610 15992175 ~ 16000945 (+)
htra3b htra3,LOC107757896,LOC107707797,LOC107660743,LOC107661977,LOC107549726 coding downstream 1278640 16040205 ~ 16050628 (+)
G64668 NA non-coding upstream 5441 14680206 ~ 14680813 (+)
G64462 NA non-coding upstream 389782 14296270 ~ 14296472 (+)
G64459 NA non-coding upstream 390993 14295002 ~ 14295261 (+)
G64308 NA non-coding upstream 629367 14056527 ~ 14056887 (+)
G64095 NA non-coding upstream 643840 14041968 ~ 14042414 (+)
G64673 NA non-coding downstream 770 14762335 ~ 14762596 (+)
LOC117597182 NA non-coding downstream 215761 14977326 ~ 15011493 (+)
G64963 NA non-coding downstream 439744 15201309 ~ 15201528 (+)
LOC117597190 NA non-coding downstream 744727 15506292 ~ 15556924 (+)
G65115 NA non-coding downstream 1107633 15869198 ~ 15870771 (+)
zgc:194930 LOC108268002 other upstream 27318 14632030 ~ 14658936 (+)
brms1 brms1,LOC108268191,LOC108428539,LOC107661966,LOC107721670,LOC107661087,LOC105894187,LOC107583285 other upstream 416914 14255744 ~ 14269340 (+)
gc2 LOC108267421,LOC108412585 other upstream 966800 13705417 ~ 13719454 (+)
cited1 cited1 other upstream 1123988 13558623 ~ 13562266 (+)
LOC113539889 LOC108267838 other upstream 1211217 13468552 ~ 13475037 (+)
LOC113540079 sh3tc1 other downstream 1261629 16023194 ~ 16039984 (+)
LOC113539780 LOC108268335,LOC108434603,LOC107731925,LOC107595313,LOC793560,LOC107675495,LOC107683530,LOC107738035 other downstream 1548648 16310213 ~ 16319166 (+)
LOC113540582 cyb5d1,LOC108267266,LOC108434590,LOC107738084,LOC107683579,LOC106577649,LOC105907155,LOC107595290,LOC107707052,LOC107702060 other downstream 1606391 16367956 ~ 16370957 (+)
arrb2b arrb2,arrb2b,LOC108434652,LOC108267683,LOC105904870,LOC101076921,LOC107750580,LOC107593814,LOC107561939 other downstream 2573932 17335497 ~ 17401388 (+)
LOC113539940 NA other downstream 2847927 17609492 ~ 17620079 (+)

Expression


Co-expression Network