gpr160 (gpr160)


Basic Information

Item Value
gene id gpr160
gene name gpr160
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 26900847 ~ 26902366 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XM_034304003.1
gtgtgtgtgtgtatacactcttttctttacagGCAAATCACCCAGGTGAGGGCCATTataatgaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttggggcaGGGTTGTAAGGTGTGTCTGTGTTATAACGTCCTCACTGCACCAGGAACTGCACACTGATTCTTCTGAGCTTCttcctgagagtgtgtgtgatagtgtatATGATGAGTATGTATGGgtgtttgtaaatgtgtgtgcatgttgtgtgtatgagtgtttgtaaatatttgtgaGTGCGTATGAGTGTTtgtaagtgtgtgcatgtgttgtgtgtgagtaatGGAGGTTTCCATGGCGACCCTGTTGGTGTCTCTGTGGATGAAGACGTTATTGAACtgggtggtgttggtggtgcaGAAGGGTcatgtggggcggagcttctgGGGCGTGTTCTGCGTATCAGTGGCGTTGGGCGACGCCCTTCTGCACCTGAGTGTCACCTGCGTGTTCCTGGCACAGGACGTTACGGTGTTCGGGCTGCACCTCACAAAGTACCACGTGTGTGTTCTGGTGCAGGCGGCGTGTTCCATCCAGGGGGTTCTGCACTGGCCCTTCTTCATCCTCTCTGGACTGGATATCGTGTGGAGCACACGCCGTGCCTGTCCTCGTCCCGTGCAAATGCTCGTCCACATCACTGTCGTGTTCCTGCTGTGGACTCTGGCCGTGTTGTACGTCTTCACCGTCCCCGATTCCCATCCGCTCACGAGAGACGAGGATGATCATGTCACCCTGCAGCGGTGTCACGTGACAGACGGGGCTCAGAGCCGGCAGGTGGCCTTGGCGTCGTTGCTGACGCTGGTGGGCGTGGCCTGCTACATACACTCAGTGAGGAGAACGAATGCTGAACATCTGAgggactgtgtgtgtcacttccTGTCCACCTGGAGCTCCTTTCTGCTCCTGCTGCTCTTCATCTTGGTGTCCGGGACAGAAGTTCCTCCATACCTGGACATGAactgtgtgtggctgtgtttcATTCACAGTCTGCACACTGCAGTGGCCCTGAGGAGCTGCGCCTGCGTTTTCTGCACTCACACGCAGGACGACACGTGGAAGAGcctcacacatctcacacaagTCTGCTTCCTGACGGACAAATCGAGTTTCACTGCAGAAACACTTTCAGCGCAGACGCTTCACACTCAGAGACTTGCCTGATCACACACATGGATAGTGTGCACTACAGATTAGTGTCATatgatgtcatcatcatcatcattgttatGAGTATGACGATGATGTGAGGCTGACGTGATGTCACCCCTTCTTCCTATGCACTATCTTTTGGATTAATATTGTTGTAATGGTGATGTACGTGATTTTGGATGTAATTGAATTTTTCATGGCATATTGTTGTCTGCTGTGGAGCACTTCCAGATCCTGGAACATTACCACAtctatacatttttcttaacAACAGAATGATAGAGTTCACGAgagaaaatgtgaataaatgatgtttgagtctgtaaa

Function

symbol description
gpr160 Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be active in plasma membrane. Orthologous to human GPR160 (G protein-coupled receptor 160).

NR:

description
PREDICTED: probable G-protein coupled receptor 160

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_034304003.1 True 1520 mRNA 0.50 1 26900847 26902366

Neighbor

gene id symbol gene type direction distance location
zgc:101744 LOC108267447,LOC107738186,LOC107684405,LOC107591448,LOC107659369,LOC108411183 coding upstream 35332 26857531 ~ 26865515 (+)
elavl1a elavl1,LOC108267445,LOC108444333,LOC107684401,LOC103034406,LOC107591334,LOC107557423 coding upstream 46698 26846891 ~ 26854149 (+)
sec62 sec62 coding upstream 69274 26823686 ~ 26831573 (+)
gadd45bb LOC108267448 coding upstream 81998 26816061 ~ 26818849 (+)
apoda.1 LOC108267187 coding upstream 130603 26766984 ~ 26770244 (+)
LOC113539948 NA coding downstream 38961 26941327 ~ 26951857 (+)
LOC113540685 LOC108267717 coding downstream 81375 26983741 ~ 27013645 (+)
LOC113540681 NA coding downstream 128374 27030740 ~ 27038359 (+)
LOC113540738 NA coding downstream 210782 27113148 ~ 27113254 (+)
ebna1bp2 ebna1bp2 coding downstream 241698 27144064 ~ 27151124 (+)
G71557 NA non-coding upstream 44242 26808057 ~ 26856605 (+)
G71550 NA non-coding upstream 114287 26784572 ~ 26786560 (+)
G71519 NA non-coding upstream 232719 26667762 ~ 26668128 (+)
G71485 NA non-coding upstream 349821 26472575 ~ 26551026 (+)
G71482 NA non-coding upstream 436533 26464011 ~ 26464314 (+)
G71819 NA non-coding downstream 140337 27042703 ~ 27042912 (+)
G71827 NA non-coding downstream 171475 27073841 ~ 27074076 (+)
G71864 NA non-coding downstream 293635 27196001 ~ 27196373 (+)
G71868 NA non-coding downstream 314986 27217352 ~ 27217839 (+)
G71869 NA non-coding downstream 315861 27218227 ~ 27218455 (+)
gng7 NA other upstream 19377 26872676 ~ 26881470 (+)
LOC117597079 LOC108267150,LOC107738160 other upstream 525021 26353189 ~ 26375826 (+)
zgc:66427 zgc:66427,LOC108267510,LOC107738154,LOC101067737,LOC107100876,LOC103396713,LOC104950485,LOC107659393,LOC107668973,LOC107706368,LOC107557724,LOC107591360 other upstream 608063 26288290 ~ 26292784 (+)
G71385 NA other upstream 671656 26228764 ~ 26229191 (+)
LOC117597118 LOC108261462,LOC108261092,LOC108261095 other upstream 676809 26216064 ~ 26224038 (+)
sgip1b LOC108267185,LOC108430747,LOC107593781,LOC107719259,LOC107681818,LOC107709351 other downstream 482441 27384807 ~ 27406398 (+)
insig1 insig1 other downstream 1400485 28302851 ~ 28383422 (+)
htr5ab htr5a,htr5ab,LOC108412811,LOC103024346,LOC107684958,LOC107659435,LOC107591053,LOC107742155,LOC107598724 other downstream 1414038 28316404 ~ 28338173 (+)
gng5 NA other downstream 1856179 28758545 ~ 28761451 (+)
selenot1a selenot,selt1a,LOC107681817,LOC107708642 other downstream 1890481 28792847 ~ 28797159 (+)

Expression


Co-expression Network