LOC113540703


Basic Information

Item Value
gene id LOC113540703
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 29524989 ~ 29525061 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003404077.1
GTATGAAGTGATGGTATACCATCTTTCGGGACTGACACGTCATGGAGAAGCTTTTTAACGTTACTGATCATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003404077.1 True 73 ncRNA 0.40 1 29524989 29525061

Neighbor

gene id symbol gene type direction distance location
LOC113540697 NA coding downstream 302 29524509 ~ 29524687 (-)
LOC113540698 NA coding downstream 1077 29523723 ~ 29523912 (-)
LOC113540702 NA coding downstream 1523 29523394 ~ 29523466 (-)
kcnmb2 NA coding downstream 58969 29461041 ~ 29466020 (-)
mfsd8l2 LOC108267997,LOC108437504 coding downstream 72196 29442115 ~ 29452793 (-)
ripk2 ripk2,LOC107681812,LOC107715521,LOC107722215,LOC107701343 coding upstream 51637 29576698 ~ 29592827 (-)
LOC113539879 LOC108267234 coding upstream 104909 29629970 ~ 29666855 (-)
si:ch211-13f8.2 LOC108268058,LOC108437498 coding upstream 156183 29681244 ~ 29692555 (-)
si:ch211-13f8.1 LOC108267891 coding upstream 168317 29693378 ~ 29705682 (-)
cdc14aa LOC108267888,LOC108411489 coding upstream 207204 29732265 ~ 29748113 (-)
G73327 NA non-coding downstream 204655 29273589 ~ 29320334 (-)
G73319 NA non-coding downstream 306831 29216270 ~ 29218158 (-)
G73318 LOC107599861 non-coding downstream 309938 29213553 ~ 29215051 (-)
G73247 NA non-coding downstream 328822 29128055 ~ 29196167 (-)
G73423 NA non-coding upstream 15034 29540095 ~ 29540356 (-)
G73439 NA non-coding upstream 82540 29607601 ~ 29607805 (-)
G73452 LOC108268059 non-coding upstream 146126 29671187 ~ 29674270 (-)
G73457 rc3h1,LOC108267889,LOC108437509 non-coding upstream 186025 29711086 ~ 29712194 (-)
G73458 LOC108267889 non-coding upstream 187832 29712893 ~ 29713446 (-)
usp33 usp33,LOC106569751,LOC107708728,LOC107751869 other downstream 353068 29148638 ~ 29171921 (-)
LOC117597037 dnajb4,LOC107566472,LOC107681825,LOC107599850,LOC107690981,LOC107751861,LOC108430719 other downstream 640024 28873578 ~ 28884965 (-)
LOC117597168 NA other downstream 733160 28787614 ~ 28791829 (-)
LOC113540437 fam159a other downstream 872564 28648324 ~ 28652425 (-)
trnas-uga_2 NA other downstream 1288184 28236724 ~ 28236805 (-)
LOC113540665 LOC108267691,LOC108437516,LOC107715522,LOC107681815,LOC105889505 other upstream 39160 29564221 ~ 29575727 (-)
zgc:110366 LOC108267892,LOC108437513 other upstream 199527 29724588 ~ 29730857 (-)
G73619 blvra other upstream 494445 30019506 ~ 30022525 (-)
LOC113540055 LOC108268301 other upstream 1216466 30741527 ~ 30750968 (-)
ccl20l LOC100304631 other upstream 1248388 30773449 ~ 30775819 (-)

Expression


Co-expression Network