LOC113540746


Basic Information

Item Value
gene id LOC113540746
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 24036718 ~ 24036854 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003404116.1
CCTCCATTTCTTGGCATACATGCAGTTGCTCAGTACTCATGTGTGTAATGTCAGGAGGTAAAGCAGAGCCAGTGCTATGTCTTCGGTGCCAGTATGTTCAGAGTATGCTGGTTCTATCCTCAATCACTGAAACACTC

Function

GO:

id name namespace
GO:0008519 ammonium transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003404116.1 True 137 ncRNA 0.46 1 24036718 24036854

Neighbor

gene id symbol gene type direction distance location
LOC113540038 NA coding downstream 26854 24007688 ~ 24009864 (-)
fastk fastk,LOC107599878,LOC107701011,LOC107557009,LOC107657442,LOC107718024 coding downstream 34854 23987804 ~ 24001864 (-)
tmub1 tmub1,LOC105023792,LOC106568619 coding downstream 54713 23974747 ~ 23982005 (-)
smarcd3a smarcd3,smarcd3a,LOC103039772,LOC107599876,LOC107718026 coding downstream 63595 23943853 ~ 23973123 (-)
abcf2a abcf2,abcf2a,LOC107599875,LOC107657436,LOC107709809,LOC107556971 coding downstream 93881 23935330 ~ 23942837 (-)
nrbp2a nrbp2a,nrbp2,LOC108267406,LOC108413492,LOC107733885,LOC107599881,LOC107657444 coding upstream 8880 24045734 ~ 24084282 (-)
bfsp2 bfsp2 coding upstream 73618 24110472 ~ 24115423 (-)
LOC113540393 LOC103037289,LOC107098295,LOC103135689,LOC106524523,LOC108267401,LOC108232979,LOC102237517 coding upstream 102945 24139799 ~ 24145026 (-)
prpf4ba prpf4b,LOC108267396 coding upstream 111718 24148572 ~ 24161793 (-)
b4galt2 b4galt2,LOC107657457,LOC107599894,LOC107700994,LOC107557142 coding upstream 565016 24601870 ~ 24740260 (-)
LOC117597086 NA non-coding downstream 104483 23931333 ~ 23932235 (-)
G69916 NA non-coding downstream 114180 23922106 ~ 23922538 (-)
G69691 NA non-coding downstream 384852 23651051 ~ 23651866 (-)
G69649 NA non-coding downstream 442174 23594331 ~ 23594544 (-)
LOC113540115 NA non-coding downstream 582497 23453233 ~ 23454221 (-)
G70025 NA non-coding upstream 101439 24138293 ~ 24138492 (-)
G70026 NA non-coding upstream 108724 24145578 ~ 24145784 (-)
G70027 NA non-coding upstream 109036 24145890 ~ 24146241 (-)
G70044 NA non-coding upstream 142177 24179031 ~ 24179864 (-)
G70540 NA non-coding upstream 835776 24872630 ~ 24872833 (-)
LOC117597117 NA other downstream 504702 23531238 ~ 23532016 (-)
LOC113540013 NA other downstream 519048 23516930 ~ 23517670 (-)
LOC113540114 LOC108267227 other downstream 520359 23515699 ~ 23516359 (-)
LOC117597116 NA other downstream 521783 23514374 ~ 23514935 (-)
LOC113540012 NA other downstream 522679 23513456 ~ 23514039 (-)
G70255 rnf220 other upstream 267520 24304374 ~ 24304926 (-)
ccdc24 ccdc24 other upstream 528887 24565741 ~ 24586048 (-)
ltb4r2b NA other upstream 2335067 26371921 ~ 26376408 (-)
G71596 NA other upstream 2435226 26472080 ~ 26551030 (-)
G71832 NA other upstream 3059748 27096602 ~ 27100858 (-)

Expression


Co-expression Network