LOC113540750


Basic Information

Item Value
gene id LOC113540750
gene name NA
gene type coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047598.1
NCBI id CM018544.1
chromosome length 33267568
location 19017270 ~ 19017400 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>XR_003404118.1
TGGGAAACTGATACATGGGTAGTTCTGAACTATGTGCTGCTCATCACTAGCATTCCCAAGATAATACCTGCTTTCTGATGACCGGGGTGAATTGAGGGAAATCACAACGGACAGATACGGAGCAGACAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_003404118.1 True 131 ncRNA 0.46 1 19017270 19017400

Neighbor

gene id symbol gene type direction distance location
LOC113540749 NA coding downstream 317 19016823 ~ 19016953 (-)
dennd4c dennd4c coding downstream 2965 18964454 ~ 19014305 (-)
acer2 acer2,LOC107601172,LOC107691831,LOC107675399,LOC107559953 coding downstream 53521 18954712 ~ 18963749 (-)
LOC113540271 LOC108267333,LOC108436197,LOC103041383,LOC107752978,LOC107691867,LOC106577738 coding downstream 69505 18943964 ~ 18947765 (-)
aco1 aco1,LOC107601170,LOC107559949,LOC107675411 coding downstream 74086 18926146 ~ 18943184 (-)
plin2 plin2,LOC100304704,LOC100526709 coding upstream 7733 19025133 ~ 19028898 (-)
larp7 larp7 coding upstream 17092 19034492 ~ 19042269 (-)
LOC113540506 LOC108267151 coding upstream 27422 19044822 ~ 19049448 (-)
LOC113540739 NA coding upstream 205339 19222739 ~ 19222843 (-)
ostc ostc,LOC107568856,LOC107558957 coding upstream 323233 19340633 ~ 19344519 (-)
G67016 NA non-coding downstream 69731 18947318 ~ 18947539 (-)
LOC113539972 NA non-coding downstream 502552 18499351 ~ 18514718 (-)
G66651 NA non-coding downstream 630280 18386561 ~ 18386990 (-)
G66387 NA non-coding downstream 996461 18015144 ~ 18020809 (-)
G66355 NA non-coding downstream 1152387 17864010 ~ 17864883 (-)
G67454 NA non-coding upstream 310948 19328348 ~ 19340529 (-)
G67453 NA non-coding upstream 315674 19333074 ~ 19339158 (-)
G67527 NA non-coding upstream 588092 19605492 ~ 19656442 (-)
G67528 NA non-coding upstream 599048 19616448 ~ 19629949 (-)
G67535 NA non-coding upstream 751957 19769357 ~ 19824919 (-)
map11 c7h7orf43,cunh7orf43,si:dkey-3k24.5,LOC107687048,LOC107594676,LOC107754664,LOC107561780,LOC105895567 other downstream 1177355 17792226 ~ 17839915 (-)
G66281 NA other downstream 1382402 17593748 ~ 17634868 (-)
rnaseka LOC108267746 other downstream 1573082 17439477 ~ 17444188 (-)
G66053 NA other downstream 1614806 17400594 ~ 17402464 (-)
bmp15 LOC108267203 other downstream 2411553 16603809 ~ 16605717 (-)
LOC113540242 adamtsl1 other upstream 32750 19050150 ~ 19155221 (-)
zgc:112271 bola2,LOC105907194,LOC108436240,LOC105020731,LOC107569065,LOC106511278 other upstream 862568 19879968 ~ 19881640 (-)
G67587 NA other upstream 870779 19888179 ~ 19888726 (-)
LOC113539792 LOC108267751,LOC108440128 other upstream 902080 19919480 ~ 19943834 (-)
snrpf snrpf,LOC106609479,LOC107738052 other upstream 945182 19962582 ~ 19965851 (-)

Expression


Co-expression Network