Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117596967 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 32849927 ~ 32851375 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_004577919.1 | True | 261 | lncRNA | 0.49 | 3 | 32849927 | 32851375 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117596934 | NA | coding | downstream | 4657 | 32844101 ~ 32845270 (-) |
| LOC117596924 | NA | coding | downstream | 14205 | 32835039 ~ 32835722 (-) |
| LOC117597140 | NA | coding | downstream | 24360 | 32823558 ~ 32825567 (-) |
| nmnat2 | nmnat2,LOC107658365,LOC107563562 | coding | downstream | 1122375 | 31710064 ~ 31727552 (-) |
| LOC113540064 | NA | coding | downstream | 1305293 | 31538539 ~ 31544634 (-) |
| LOC117597141 | NA | coding | upstream | 121410 | 32972785 ~ 32977700 (-) |
| LOC117597142 | NA | coding | upstream | 144981 | 32996356 ~ 32996892 (-) |
| LOC117597007 | NA | coding | upstream | 181643 | 33033018 ~ 33033661 (-) |
| c4h14orf119 | LOC108267721 | coding | upstream | 279712 | 33131087 ~ 33135775 (-) |
| cbln12 | LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140 | coding | upstream | 314567 | 33165942 ~ 33168027 (-) |
| LOC113540133 | NA | non-coding | downstream | 33646 | 32815429 ~ 32816281 (-) |
| LOC117597139 | NA | non-coding | downstream | 38192 | 32810432 ~ 32811735 (-) |
| LOC117596923 | NA | non-coding | downstream | 39631 | 32809596 ~ 32810296 (-) |
| LOC117596938 | NA | non-coding | downstream | 45705 | 32803554 ~ 32804222 (-) |
| LOC117596927 | NA | non-coding | downstream | 72129 | 32776966 ~ 32777798 (-) |
| G74702 | NA | non-coding | upstream | 10832 | 32862207 ~ 32862659 (-) |
| LOC117596966 | NA | non-coding | upstream | 20371 | 32871746 ~ 32873023 (-) |
| G74717 | NA | non-coding | upstream | 174046 | 33025421 ~ 33025846 (-) |
| G74720 | NA | non-coding | upstream | 179667 | 33031042 ~ 33031426 (-) |
| G74731 | NA | non-coding | upstream | 233023 | 33084398 ~ 33084836 (-) |
| LOC117596929 | NA | other | downstream | 184507 | 32661892 ~ 32665420 (-) |
| G74644 | NA | other | downstream | 205393 | 32644024 ~ 32644534 (-) |
| LOC117596950 | NA | other | downstream | 216216 | 32633213 ~ 32633711 (-) |
| LOC117596946 | NA | other | downstream | 646022 | 32203394 ~ 32203905 (-) |
| LOC117597125 | NA | other | downstream | 671803 | 32175807 ~ 32178124 (-) |
| G74703 | NA | other | upstream | 14571 | 32865946 ~ 32868466 (-) |
| LOC117597171 | NA | other | upstream | 94759 | 32946134 ~ 32947158 (-) |
| LOC117597170 | NA | other | upstream | 98459 | 32949834 ~ 32950494 (-) |
| LOC117597177 | NA | other | upstream | 119629 | 32971004 ~ 32971513 (-) |
| LOC117597009 | NA | other | upstream | 183528 | 33034903 ~ 33042101 (-) |
