Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117596990 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 33090206 ~ 33091128 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_004577944.1 | True | 206 | lncRNA | 0.49 | 4 | 33090206 | 33091128 |
| XR_004577945.1 | False | 191 | ncRNA | 0.50 | 3 | 33090206 | 33091128 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597007 | NA | coding | downstream | 56545 | 33033018 ~ 33033661 (-) |
| LOC117597142 | NA | coding | downstream | 93314 | 32996356 ~ 32996892 (-) |
| LOC117597141 | NA | coding | downstream | 112506 | 32972785 ~ 32977700 (-) |
| LOC117596934 | NA | coding | downstream | 244936 | 32844101 ~ 32845270 (-) |
| LOC117596924 | NA | coding | downstream | 254484 | 32835039 ~ 32835722 (-) |
| c4h14orf119 | LOC108267721 | coding | upstream | 39959 | 33131087 ~ 33135775 (-) |
| cbln12 | LOC108267329,LOC107591379,LOC107704284,LOC107557939,LOC103040079,LOC108438942,LOC107668986,LOC107738140 | coding | upstream | 74814 | 33165942 ~ 33168027 (-) |
| G74731 | NA | non-coding | downstream | 5370 | 33084398 ~ 33084836 (-) |
| G74720 | NA | non-coding | downstream | 58780 | 33031042 ~ 33031426 (-) |
| G74717 | NA | non-coding | downstream | 64360 | 33025421 ~ 33025846 (-) |
| LOC117596966 | NA | non-coding | downstream | 217183 | 32871746 ~ 32873023 (-) |
| G74702 | NA | non-coding | downstream | 227547 | 32862207 ~ 32862659 (-) |
| G74736 | NA | non-coding | upstream | 17001 | 33108129 ~ 33108638 (-) |
| G74737 | NA | non-coding | upstream | 23616 | 33114744 ~ 33114997 (-) |
| G74744 | NA | non-coding | upstream | 31464 | 33122592 ~ 33122959 (-) |
| G74748 | NA | non-coding | upstream | 34539 | 33125667 ~ 33125874 (-) |
| LOC117597189 | NA | other | downstream | 6884 | 33082197 ~ 33083322 (-) |
| LOC117597193 | NA | other | downstream | 31844 | 33057498 ~ 33058362 (-) |
| LOC117597009 | NA | other | downstream | 48105 | 33034903 ~ 33042101 (-) |
| LOC117597008 | NA | other | downstream | 52500 | 33037061 ~ 33037706 (-) |
| LOC117597177 | NA | other | downstream | 118693 | 32971004 ~ 32971513 (-) |
| LOC117597195 | NA | other | upstream | 7623 | 33098751 ~ 33099488 (-) |
| LOC117597204 | NA | other | upstream | 10006 | 33101134 ~ 33101640 (-) |
| LOC117597199 | NA | other | upstream | 18690 | 33109818 ~ 33110318 (-) |
| LOC117597144 | NA | other | upstream | 29664 | 33120792 ~ 33125144 (-) |
