Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117597020 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 535865 ~ 537721 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_004577965.1 | True | 550 | lncRNA | 0.49 | 4 | 535865 | 537721 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 214176 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 263245 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 350892 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 427771 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 451401 | 65830 ~ 84464 (-) |
| LOC117597018 | NA | coding | upstream | 162328 | 700049 ~ 704378 (-) |
| LOC117597015 | NA | coding | upstream | 172638 | 710359 ~ 719607 (-) |
| LOC117597014 | NA | coding | upstream | 310352 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 325657 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 387313 | 925034 ~ 933915 (-) |
| G57810 | NA | non-coding | downstream | 16880 | 492652 ~ 518985 (-) |
| LOC117597030 | NA | non-coding | downstream | 25862 | 498209 ~ 510003 (-) |
| G57792 | NA | non-coding | downstream | 31984 | 381065 ~ 503881 (-) |
| G57805 | NA | non-coding | downstream | 34659 | 454842 ~ 501206 (-) |
| G57788 | NA | non-coding | downstream | 38764 | 374455 ~ 497101 (-) |
| G57816 | NA | non-coding | upstream | 6442 | 544163 ~ 826584 (-) |
| G57755 | NA | non-coding | upstream | 14378 | 552099 ~ 595196 (-) |
| G57818 | NA | non-coding | upstream | 16048 | 553769 ~ 599202 (-) |
| G57820 | NA | non-coding | upstream | 19421 | 557142 ~ 587403 (-) |
| G57822 | NA | non-coding | upstream | 21173 | 558894 ~ 740486 (-) |
| LOC117597012 | NA | other | downstream | 38302 | 347059 ~ 497563 (-) |
| LOC117597013 | NA | other | downstream | 84172 | 375243 ~ 451693 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 235848 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 437748 | 84815 ~ 98117 (-) |
| G57830 | NA | other | upstream | 74522 | 612243 ~ 614243 (-) |
| G57838 | NA | other | upstream | 145767 | 683488 ~ 746031 (-) |
| G57740 | NA | other | upstream | 195834 | 733555 ~ 734771 (-) |
| G57868 | NA | other | upstream | 448190 | 985911 ~ 1048841 (-) |
| LOC117597039 | NA | other | upstream | 472504 | 1010225 ~ 1029025 (-) |
