Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC117597022 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 696118 ~ 699232 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_004577967.1 | True | 738 | lncRNA | 0.45 | 4 | 696118 | 699232 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC117597016 | NA | coding | downstream | 374429 | 303683 ~ 321689 (-) |
| LOC113525282 | LOC108267103 | coding | downstream | 423498 | 262446 ~ 272620 (-) |
| LOC113525290 | NA | coding | downstream | 511145 | 177871 ~ 184973 (-) |
| bcl10 | bcl10 | coding | downstream | 588024 | 99678 ~ 108094 (-) |
| ssx2ipa | ssx2ip | coding | downstream | 611654 | 65830 ~ 84464 (-) |
| LOC117597018 | NA | coding | upstream | 817 | 700049 ~ 704378 (-) |
| LOC117597015 | NA | coding | upstream | 11127 | 710359 ~ 719607 (-) |
| LOC117597014 | NA | coding | upstream | 148841 | 848073 ~ 857200 (-) |
| dis3l2 | dis3l2 | coding | upstream | 164146 | 863378 ~ 886395 (-) |
| LOC113524111 | LOC108267115,LOC108415103 | coding | upstream | 225802 | 925034 ~ 933915 (-) |
| G57761 | NA | non-coding | downstream | 21630 | 600626 ~ 674488 (-) |
| G57837 | NA | non-coding | downstream | 22395 | 672869 ~ 673723 (-) |
| G57836 | NA | non-coding | downstream | 23321 | 672019 ~ 672797 (-) |
| G57832 | NA | non-coding | downstream | 75980 | 619705 ~ 620138 (-) |
| G57821 | NA | non-coding | downstream | 77263 | 559634 ~ 618855 (-) |
| LOC117597026 | NA | non-coding | upstream | 35689 | 734921 ~ 748267 (-) |
| G57843 | NA | non-coding | upstream | 52354 | 751586 ~ 752375 (-) |
| G57844 | NA | non-coding | upstream | 67973 | 767205 ~ 767558 (-) |
| G57848 | NA | non-coding | upstream | 123018 | 822250 ~ 825864 (-) |
| G57849 | NA | non-coding | upstream | 123548 | 822780 ~ 824304 (-) |
| G57830 | NA | other | downstream | 81875 | 612243 ~ 614243 (-) |
| LOC117597012 | NA | other | downstream | 198555 | 347059 ~ 497563 (-) |
| LOC117597013 | NA | other | downstream | 244425 | 375243 ~ 451693 (-) |
| eif2b5 | eif2b5,LOC107671691,LOC107567864,LOC107660395 | other | downstream | 396101 | 279982 ~ 300017 (-) |
| LOC117596995 | LOC108268238 | other | downstream | 598001 | 84815 ~ 98117 (-) |
| G57740 | NA | other | upstream | 34323 | 733555 ~ 734771 (-) |
| G57868 | NA | other | upstream | 286679 | 985911 ~ 1048841 (-) |
| LOC117597039 | NA | other | upstream | 310993 | 1010225 ~ 1029025 (-) |
| G58190 | NA | other | upstream | 993094 | 1692326 ~ 1692997 (-) |
| G58534 | NA | other | upstream | 1371792 | 2071024 ~ 2104011 (-) |
