Gene
RNA
| Item | Value |
|---|---|
| gene id | trnaa-ugc |
| gene name | NA |
| gene type | coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 21418168 ~ 21418239 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| Deoxyribonuclease gamma precursor |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnaa-ugc | True | 72 | tRNA | 0.58 | 1 | 21418168 | 21418239 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| mrpl15 | mrpl15 | coding | downstream | 340 | 21413861 ~ 21417828 (-) |
| sox32 | LOC108267240,LOC100698545 | coding | downstream | 16900 | 21399555 ~ 21401268 (-) |
| sox17 | LOC108267806 | coding | downstream | 38209 | 21376395 ~ 21379959 (-) |
| LOC113540120 | LOC108267808 | coding | downstream | 67357 | 21337108 ~ 21350811 (-) |
| LOC113540421 | LOC108267573 | coding | downstream | 169531 | 21235253 ~ 21248637 (-) |
| LOC113540027 | rgs20 | coding | upstream | 8946 | 21427185 ~ 21430580 (-) |
| fastkd3 | fastkd3 | coding | upstream | 62376 | 21480615 ~ 21485813 (-) |
| myl12.1 | LOC108267514,LOC101069867,LOC108436131,LOC103377455,LOC101484951 | coding | upstream | 69948 | 21488187 ~ 21492336 (-) |
| emilin2b | LOC108267875 | coding | upstream | 136287 | 21554526 ~ 21580543 (-) |
| smchd1 | smchd1 | coding | upstream | 163983 | 21582222 ~ 21623632 (-) |
| G68495 | NA | non-coding | downstream | 9961 | 21407111 ~ 21408207 (-) |
| G68466 | plag1 | non-coding | downstream | 97022 | 21320818 ~ 21321146 (-) |
| G68186 | NA | non-coding | downstream | 614064 | 20803417 ~ 20804104 (-) |
| G68108 | NA | non-coding | downstream | 781969 | 20635904 ~ 20636199 (-) |
| G68107 | NA | non-coding | downstream | 782375 | 20635532 ~ 20635793 (-) |
| G68519 | NA | non-coding | upstream | 53393 | 21471632 ~ 21471839 (-) |
| G68520 | NA | non-coding | upstream | 54580 | 21472819 ~ 21473032 (-) |
| G68577 | NA | non-coding | upstream | 56348 | 21474587 ~ 21475776 (-) |
| G68585 | NA | non-coding | upstream | 78693 | 21496932 ~ 21501433 (-) |
| G68740 | mrc1 | non-coding | upstream | 410034 | 21828273 ~ 21828833 (-) |
| LOC113539989 | LOC108436138 | other | downstream | 47158 | 21354619 ~ 21371010 (-) |
| G68462 | NA | other | downstream | 88918 | 21326046 ~ 21329250 (-) |
| chchd7 | chchd7 | other | downstream | 104271 | 21304692 ~ 21313897 (-) |
| znf16l | LOC108268318 | other | downstream | 592648 | 20778538 ~ 20825520 (-) |
| snrpf | snrpf,LOC106609479,LOC107738052 | other | downstream | 1452317 | 19962582 ~ 19965851 (-) |
| G68760 | NA | other | upstream | 516287 | 21934526 ~ 21935169 (-) |
| LOC113540019 | LOC108268143 | other | upstream | 1211376 | 22629615 ~ 22636088 (-) |
| lrrcc1 | lrrcc1 | other | upstream | 1873809 | 23292048 ~ 23306934 (-) |
| retreg1 | fam134b | other | upstream | 1912777 | 23331016 ~ 23346573 (-) |
| LOC117597073 | LOC108267227,LOC108267226 | other | upstream | 2061726 | 23479965 ~ 23483850 (-) |
