Gene
RNA
| Item | Value |
|---|---|
| gene id | trnag-ucc_1 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2658003 ~ 2658074 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnag-ucc_1 | True | 72 | tRNA | 0.58 | 1 | 2658003 | 2658074 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| greb1l | greb1l | coding | downstream | 309659 | 2284687 ~ 2348344 (-) |
| kiaa0232 | kiaa0232,zgc:158564 | coding | downstream | 465110 | 2175540 ~ 2192893 (-) |
| tbc1d14 | tbc1d14 | coding | downstream | 489352 | 2115603 ~ 2168651 (-) |
| LOC113524117 | NA | coding | downstream | 576247 | 2057472 ~ 2081756 (-) |
| LOC113524116 | NA | coding | downstream | 583489 | 2071011 ~ 2074514 (-) |
| LOC117597042 | NA | coding | upstream | 72712 | 2730786 ~ 2732506 (-) |
| trnag-ucc_10 | NA | coding | upstream | 83683 | 2741757 ~ 2741828 (-) |
| trnag-ucc_11 | NA | coding | upstream | 93124 | 2751198 ~ 2751269 (-) |
| LOC117597045 | NA | coding | upstream | 107444 | 2765518 ~ 2767521 (-) |
| trnag-ucc_12 | NA | coding | upstream | 124203 | 2782277 ~ 2782348 (-) |
| G58648 | NA | non-coding | downstream | 39210 | 2607752 ~ 2618793 (-) |
| G58650 | NA | non-coding | downstream | 40574 | 2611416 ~ 2617429 (-) |
| G58645 | NA | non-coding | downstream | 47751 | 2604477 ~ 2610252 (-) |
| G58628 | NA | non-coding | downstream | 90199 | 2535115 ~ 2567804 (-) |
| G58598 | NA | non-coding | downstream | 255699 | 2376593 ~ 2402304 (-) |
| G58703 | NA | non-coding | upstream | 173098 | 2831172 ~ 2831373 (-) |
| G58704 | grpel1 | non-coding | upstream | 174604 | 2832678 ~ 2834631 (-) |
| LOC113524008 | NA | non-coding | upstream | 186506 | 2844580 ~ 2853974 (-) |
| G58809 | NA | non-coding | upstream | 371629 | 3029703 ~ 3084722 (-) |
| G58832 | NA | non-coding | upstream | 415099 | 3073173 ~ 3073765 (-) |
| LOC113523983 | NA | other | downstream | 435904 | 2204552 ~ 2222099 (-) |
| G58534 | NA | other | downstream | 553992 | 2071024 ~ 2104011 (-) |
| G58190 | NA | other | downstream | 965006 | 1692326 ~ 1692997 (-) |
| G57868 | NA | other | downstream | 1609162 | 985911 ~ 1048841 (-) |
| LOC117597039 | NA | other | downstream | 1628978 | 1010225 ~ 1029025 (-) |
| trnag-ucc_2 | NA | other | upstream | 8693 | 2666767 ~ 2666838 (-) |
| trnag-ucc_3 | NA | other | upstream | 13826 | 2671900 ~ 2671971 (-) |
| trnag-ucc_4 | NA | other | upstream | 14697 | 2672771 ~ 2676041 (-) |
| trnag-ucc_9 | NA | other | upstream | 22507 | 2680581 ~ 2726284 (-) |
| trnag-ucc_5 | NA | other | upstream | 22701 | 2680775 ~ 2680846 (-) |
