Gene
RNA
| Item | Value |
|---|---|
| gene id | trnag-ucc_5 |
| gene name | NA |
| gene type | misc |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047598.1 |
| NCBI id | CM018544.1 |
| chromosome length | 33267568 |
| location | 2680775 ~ 2680846 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnag-ucc_5 | True | 72 | tRNA | 0.58 | 1 | 2680775 | 2680846 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| greb1l | greb1l | coding | downstream | 332431 | 2284687 ~ 2348344 (-) |
| kiaa0232 | kiaa0232,zgc:158564 | coding | downstream | 487882 | 2175540 ~ 2192893 (-) |
| tbc1d14 | tbc1d14 | coding | downstream | 512124 | 2115603 ~ 2168651 (-) |
| LOC113524117 | NA | coding | downstream | 599019 | 2057472 ~ 2081756 (-) |
| LOC117597042 | NA | coding | upstream | 49940 | 2730786 ~ 2732506 (-) |
| trnag-ucc_10 | NA | coding | upstream | 60911 | 2741757 ~ 2741828 (-) |
| trnag-ucc_11 | NA | coding | upstream | 70352 | 2751198 ~ 2751269 (-) |
| LOC117597045 | NA | coding | upstream | 84672 | 2765518 ~ 2767521 (-) |
| trnag-ucc_12 | NA | coding | upstream | 101431 | 2782277 ~ 2782348 (-) |
| G58648 | NA | non-coding | downstream | 61982 | 2607752 ~ 2618793 (-) |
| G58650 | NA | non-coding | downstream | 63346 | 2611416 ~ 2617429 (-) |
| G58645 | NA | non-coding | downstream | 70523 | 2604477 ~ 2610252 (-) |
| G58628 | NA | non-coding | downstream | 112971 | 2535115 ~ 2567804 (-) |
| G58598 | NA | non-coding | downstream | 278471 | 2376593 ~ 2402304 (-) |
| G58703 | NA | non-coding | upstream | 150326 | 2831172 ~ 2831373 (-) |
| G58704 | grpel1 | non-coding | upstream | 151832 | 2832678 ~ 2834631 (-) |
| LOC113524008 | NA | non-coding | upstream | 163734 | 2844580 ~ 2853974 (-) |
| G58809 | NA | non-coding | upstream | 348857 | 3029703 ~ 3084722 (-) |
| G58832 | NA | non-coding | upstream | 392327 | 3073173 ~ 3073765 (-) |
| trnag-ucc_4 | NA | other | downstream | 4734 | 2672771 ~ 2676041 (-) |
| trnag-ucc_3 | NA | other | downstream | 8804 | 2671900 ~ 2671971 (-) |
| trnag-ucc_2 | NA | other | downstream | 13937 | 2666767 ~ 2666838 (-) |
| trnag-ucc_1 | NA | other | downstream | 22701 | 2658003 ~ 2658074 (-) |
| LOC113523983 | NA | other | downstream | 458676 | 2204552 ~ 2222099 (-) |
| trnag-ucc_6 | NA | other | upstream | 25205 | 2706051 ~ 2706122 (-) |
| trnag-ucc_7 | NA | other | upstream | 29281 | 2710127 ~ 2710198 (-) |
| trnag-ucc_8 | NA | other | upstream | 35184 | 2716030 ~ 2716101 (-) |
| G58696 | NA | other | upstream | 134144 | 2814990 ~ 2817550 (-) |
| LOC113523993 | LOC108261096,LOC108261462,LOC108261092 | other | upstream | 427208 | 3108054 ~ 3115054 (-) |
