Gene
RNA
| Item | Value |
|---|---|
| gene id | G38405 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 343361 ~ 343651 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45480 | True | 291 | lncRNA | 0.49 | 1 | 343361 | 343651 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cdkn2a/b | LOC108263810 | coding | upstream | 402687 | 746338 ~ 755807 (-) |
| cxxc4 | cxxc4 | coding | upstream | 494860 | 838511 ~ 871353 (-) |
| ppa2 | ppa2,LOC108414713 | coding | upstream | 582300 | 925951 ~ 937449 (-) |
| ints12 | ints12 | coding | upstream | 721736 | 1065387 ~ 1069815 (-) |
| anp32b | anp32b | coding | upstream | 802478 | 1146129 ~ 1153350 (-) |
| G38404 | NA | non-coding | downstream | 306 | 342831 ~ 343055 (-) |
| G38402 | NA | non-coding | downstream | 16375 | 326682 ~ 326986 (-) |
| G38401 | NA | non-coding | downstream | 23230 | 319827 ~ 320131 (-) |
| G38393 | NA | non-coding | downstream | 69927 | 269286 ~ 273434 (-) |
| G38385 | NA | non-coding | downstream | 70446 | 216254 ~ 272915 (-) |
| G38418 | NA | non-coding | upstream | 87236 | 430887 ~ 441977 (-) |
| G38421 | NA | non-coding | upstream | 100743 | 444394 ~ 449427 (-) |
| G38430 | NA | non-coding | upstream | 225101 | 568752 ~ 572675 (-) |
| G38467 | NA | non-coding | upstream | 347496 | 691147 ~ 697003 (-) |
| G38476 | NA | non-coding | upstream | 362328 | 705979 ~ 706336 (-) |
| G38400 | NA | other | downstream | 27833 | 314981 ~ 315528 (-) |
| LOC117596825 | LOC108263784,LOC108261164,LOC108261316,LOC108263779 | other | downstream | 75546 | 221729 ~ 267815 (-) |
| LOC113524614 | NA | other | upstream | 660826 | 1004477 ~ 1007050 (-) |
| cntln | cntln,LOC108263774 | other | upstream | 926794 | 1270445 ~ 1369012 (-) |
| G39603 | casp6,LOC108263800,LOC108434124 | other | upstream | 1528282 | 1871933 ~ 1877583 (-) |
| lgi2b | LOC108263253,LOC108411628 | other | upstream | 1626112 | 1969763 ~ 1979549 (-) |
| G39720 | NA | other | upstream | 1829707 | 2173358 ~ 2173751 (-) |
