Gene
RNA
| Item | Value |
|---|---|
| gene id | G38531 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 854872 ~ 856044 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC103376870 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU45647 | True | 447 | lncRNA | 0.48 | 4 | 854872 | 856044 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC113525488 | NA | coding | upstream | 152305 | 698177 ~ 702567 (+) |
| LOC117596906 | NA | coding | upstream | 165369 | 689114 ~ 689503 (+) |
| LOC113525487 | NA | coding | upstream | 166086 | 669887 ~ 688786 (+) |
| LOC113525482 | NA | coding | upstream | 222342 | 625093 ~ 632530 (+) |
| LOC113525486 | NA | coding | upstream | 390813 | 450594 ~ 464059 (+) |
| LOC117596917 | NA | coding | downstream | 129504 | 985548 ~ 988804 (+) |
| LOC113524625 | LOC108263780 | coding | downstream | 161350 | 1017394 ~ 1025345 (+) |
| arhgef38 | arhgef38 | coding | downstream | 182631 | 1038675 ~ 1061874 (+) |
| uso1 | uso1 | coding | downstream | 216693 | 1072737 ~ 1094921 (+) |
| hemgn | NA | coding | downstream | 306575 | 1162619 ~ 1165369 (+) |
| G38522 | NA | non-coding | upstream | 22907 | 831733 ~ 831965 (+) |
| G38514 | NA | non-coding | upstream | 32048 | 822274 ~ 822824 (+) |
| G38503 | NA | non-coding | upstream | 78623 | 776036 ~ 776249 (+) |
| G38489 | NA | non-coding | upstream | 113674 | 740517 ~ 741198 (+) |
| G38484 | NA | non-coding | upstream | 127507 | 726638 ~ 727365 (+) |
| G38541 | cxxc4,LOC103148507 | non-coding | downstream | 10142 | 866186 ~ 871573 (+) |
| G38547 | NA | non-coding | downstream | 44192 | 900236 ~ 904652 (+) |
| G38548 | NA | non-coding | downstream | 45890 | 901934 ~ 907387 (+) |
| G38552 | NA | non-coding | downstream | 66609 | 922653 ~ 925538 (+) |
| G38563 | NA | non-coding | downstream | 103376 | 959420 ~ 959678 (+) |
| mtap | mtap,LOC108263789 | other | upstream | 109873 | 722127 ~ 744999 (+) |
| LOC113524725 | LOC108261757,LOC108261316,LOC108263784,LOC108261164 | other | upstream | 641143 | 200601 ~ 213729 (+) |
| G38577 | NA | other | downstream | 207928 | 1063972 ~ 1065331 (+) |
| coro2a | coro2a | other | downstream | 246734 | 1102778 ~ 1141934 (+) |
| trmo | trmo | other | downstream | 309801 | 1165845 ~ 1188594 (+) |
| sh3gl2a | sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329 | other | downstream | 338175 | 1194219 ~ 1224601 (+) |
| cdk2ap2 | cdk2ap2 | other | downstream | 1127603 | 1983647 ~ 1997265 (+) |
