gng2 (gbg2,gng2,LOC108239039,LOC106603227)


Basic Information

Item Value
gene id gng2
gene name gbg2,gng2,LOC108239039,LOC106603227
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 20357934 ~ 20369445 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU58943
CATGAGAAGGGCTGTCAGCCAGAGTGGTGtagcagacagtgtgtgtgtgcatgtgtttatgcatgtgtgtgtggcaaaAGTGTGAGGAAGAGGGACAGTGCGTGAGAGAACATTTGGCTACTACTACTGATTTTGGAGTCTCCGagaagaaataaacagatacaTAATCTGAGAAGGCTGAAGTCTGAATAGAGGGACACAAGATTGGACCTTGAGCAGTGACATTCAAGGGGTAGAGTGAGCTGAAAAGACTGAAGAGAGATTTAAGTACTGTTCGTGTTTAAGCCTCCCAGTCCAGCAGACTCATGGCTAGCAACAACACTGCCAGCATCGCCCAGGCACGTAAACTGGTGGAACAGCTCAAGATGGAAGCTAACATTGACCGTATAAagGTGTCTAAAGCGGCTGCAGACCTGATGTCATACTGCGAAGCTCACGCTAAGGAGGACCCTCTGCTGTCACCTGTGCCTGCTTCTGAGAATCCCTTCAGGGAGAAGAAGTTCTTCTGTGCCATCCTGTAAGCAGTGATGGCTGGCCTTGGGCATGCCTGCTCCATCTGGGACCCACACACATTGATGTTAAGAACGAAAACCTTTTAGCGAGGGCTGAGGGGCAGGCGTGCAGTGACTCCTCAACCTCACCTGGTTCTCCATGCTCCCCGTGCAAAACCCCAGCATGGAGGGAGGGCCAGAGCTGTGCATGTTTACAAGGGAAAGCACAGCCAACATGAGCAACTGGCTTTACAGCAGCTCAAGCTGGATATGATGTGTAAATTGCAGTATTAATGCGGTATTTTGTGGTCCCTATGAGGtattcaaatgttttgtttgattAAATTAAGTTGATCATGATTTCGAAGCTGATCACTGAGCAAAGAACCATGGATTGCCATGGAAATGTTCTGATTTCTTCTTTGTTTGCTCTATTTCAATAATCATTGATTTCTCTTAAATGAATCTGGTATATATGACTTAGGTAGCTTTCTAtgtatgtactttttttaatttaataataatagataggTAAACGCATTTTTTTATGAAAGATTTGCACACATACAAATATTCCTAACAGATACGTATCTTTATGAAACTGATTACAACATTTGAATATGTATAGCAggcaatttaattttttgtctCCTTCAAAAAGATAGGTCTTTTTACTATTTGTAAAAATCAACTGTGTTGTGCTGTATGGTTTGAATGTCTGTGGTGATTccaataataactgcatg
>TU58944
CATGAGAAGGGCTGTCAGCCAGAGTGGTGtagcagacagtgtgtgtgtgcatgtgtttatgcatgtgtgtgtggcaaaAGTGTGAGGAAGAGGGACAGTGCGTGAGAGAACATTTGGCTACTACTACTGATTTTGGAGTCTCCGagaagaaataaacagatacaTAATCTGAGAAGGCTGAAGTCTGAATAGAGGGACACAAGATTGGACCTTGAGCAGTGACATTCAAGGGGTAGAGTGAGCTGAAAAGACTGAAGAGAGATTTAAGTACTGTTCGTGTTTAAGCCTCCCAGTCCAGCAGACTCATGGCTAGCAACAACACTGCCAGCATCGCCCAGGCACGTAAACTGGTGGAACAGCTCAAGATGGAAGCTAACATTGACCGTATAAagGTGTCTAAAGCGGCTGCAGACCTGATGTCATACTGCGAAGCTCACGCTAAGGAGGACCCTCTGCTGTCACCTGTGCCTGCTTCTGAGAATCCCTTCAGGGAGAAGAAGTTCTTCTGTGCCATCCTGTAAGCAGTGATGGCTGGCCTTGGGCATGCCTGCTCCATCTGGGACCCACACACATTGATGTTAAGAACGAAAACCTTTTAGCGAGGGCTGAGGGGCAGGCGTGCAGTGACTCCTCAACCTCACCTGGTTCTCCATGCTCCCCGTGCAAAACCCCAGCATGGAGGGAGGGCCAGAGCTGTGCATGTTTACAAGGGAAAGCACAGCCAACATGAGCAACTGGCTTTACAGCAGCTCAAGCTGGATATGATGTGTAAATTGCAGTATTAATGCGGTATTTTGTGGTCCCTATGAGGtattcaaatgttttgtttgattAAATTAAGTTGATCATGATTTCGAAGCTGATCACTGAGCAAAGAACCATGGATTGCCATGGAAATGTTCTGATTTCTTCTTTGTTTGCTCTATTTCAATAATCATTGATTTCTCTTAAATGAATCTGGTATATATGACTTAGGTAGCTTTCTAtgtatgtactttttttaatttaataataatagataggTAAACGCATTTTTTTATGAAAGATTTGCACACATACAAATATTCCTAACAGATACGTATCTTTATGAAACTGATTACAACATTTGAATATGTATAGCAggcaatttaattttttgtctCCTTCAAAAAGATAGGTCTTTTTACTATTTGTAAAAATCAACTGTGTTGTGCTGTATGGTTTGAATGTCTGTGGTGATTccaataataactgcatgaaaacttaaaaattaaaagtctttttgtcttttttttttttaattattaaaacc
>TU58946
CCACAGCACAGGACTGGCTGCCCTGTGCATGCTGTGAAAGACAGAGGTTGTGTAGAGGAGCAATTCTACTGGGCAGAACTGCACCACATCACATACACTGGAATTAGTGTCTGAGGTGCACAAATATAAAACGTGCCTGGCAGAACAAGATAAAGGTGCATGAAAGCAACAGTGTGACTGTAGGATGAAGCATCTGTAGGAGGAGAGCAGGCTGAAGTCTGAATAGAGGGACACAAGATTGGACCTTGAGCAGTGACATTCAAGGGGTAGAGTGAGCTGAAAAGACTGAAGAGAGATTTAAGTACTGTTCGTGTTTAAGCCTCCCAGTCCAGCAGACTCATGGCTAGCAACAACACTGCCAGCATCGCCCAGGCACGTAAACTGGTGGAACAGCTCAAGATGGAAGCTAACATTGACCGTATAAagGTGTCTAAAGCGGCTGCAGACCTGATGTCATACTGCGAAGCTCACGCTAAGGAGGACCCTCTGCTGTCACCTGTGCCTGCTTCTGAGAATCCCTTCAGGGAGAAGAAGTTCTTCTGTGCCATCCTGTAAGCAGTGATGGCTGGCCTTGGGCATGCCTGCTCCATCTGGGACCCACACACATTGATGTTAAGAACGAAAACCTTTTAGCGAGGGCTGAGGGGCAGGCGTGCAGTGACTCCTCAACCTCACCTGGTTCTCCATGCTCCCCGTGCAAAACCCCAGCATGGAGGGAGGGCCAGAGCTGTGCATGTTTACAAGGGAAAGCACAGCCAACATGAGCAACTGGCTTTACAGCAGCTCAAGCTGGATATGATGTGTAAATTGCAGTATTAATGCGGTATTTTGTGGTCCCTATGAGGtattcaaatgttttgtttgattAAATTAAGTTGATCATGATTTCGAAGCTGATCACTGAGCAAAGAACCATGGATTGCCATGGAAATGTTCTGATTTCTTCTTTGTTTGCTCTATTTCAATAATCATTGATTTCTCTTAAATGAATCTGGTATATATGACTTAGGTAGCTTTCTAtgtatgtactttttttaatttaataataatagataggTAAACGCATTTTTTTATGAAAGATTTGCACACATACAAATATTCCTAACAGATACGTATCTTTATGAAACTGATTACAACATTTGAATATGTATAGCAggcaatttaattttttgtctCCTTCAAAAAGATAGGTCTTTTTACTATTTGTAAAAATCAACTGTGTTGTGCTGTATGGTTTGAATGTCTGTGGTGATTccaataataactgcatg
>XM_026941743.2
AGCTGTTGGGCGGAGCATGAGAAGGGCTGTCAGCCAGAGTGGTGtagcagacagtgtgtgtgtgcatgtgtttatgcatgtgtgtgtggcaaaAGTGTGAGGAAGAGGGACAGTGCGTGAGAGAACATTTGGCTACTACTACTGATTTTGGAGTCTCCGagaagaaataaacagatacaTAATCTGAGAAGGCTGAAGTCTGAATAGAGGGACACAAGATTGGACCTTGAGCAGTGACATTCAAGGGGTAGAGTGAGCTGAAAAGACTGAAGAGAGATTTAAGTACTGTTCGTGTTTAAGCCTCCCAGTCCAGCAGACTCATGGCTAGCAACAACACTGCCAGCATCGCCCAGGCACGTAAACTGGTGGAACAGCTCAAGATGGAAGCTAACATTGACCGTATAAagGTGTCTAAAGCGGCTGCAGACCTGATGTCATACTGCGAAGCTCACGCTAAGGAGGACCCTCTGCTGTCACCTGTGCCTGCTTCTGAGAATCCCTTCAGGGAGAAGAAGTTCTTCTGTGCCATCCTGTAAGCAGTGATGGCTGGCCTTGGGCATGCCTGCTCCATCTGGGACCCACACACATTGATGTTAAGAACGAAAACCTTTTAGCGAGGGCTGAGGGGCAGGCGTGCAGTGACTCCTCAACCTCACCTGGTTCTCCATGCTCCCCGTGCAAAACCCCAGCATGGAGGGAGGGCCAGAGCTGTGCATGTTTACAAGGGAAAGCACAGCCAACATGAGCAACTGGCTTTACAGCAGCTCAAGCTGGATATGATGTGTAAATTGCAGTATTAATGCGGTATTTTGTGGTCCCTATGAGGtattcaaatgttttgtttgattAAATTAAGTTGATCATGATTTCGAAGCTGATCACTGAGCAAAGAACCATGGATTGCCATGGAAATGTTCTGATTTCTTCTTTGTTTGCTCTATTTCAATAATCATTGATTTCTCTTAAATGAATCTGGTATATATGACTTAGGTAGCTTTCTAtgtatgtactttttttaatttaataataatagataggTAAACGCATTTTTTTATGAAAGATTTGCACACATACAAATATTCCTAACAGATACGTATCTTTATGAAACTGATTACAACATTTGAATATGTATAGCAggcaatttaattttttgtctCCTTCAAAAAGATAGGTCTTTTTACTATTTGTAAAAATCAACTGTGTTGTGCTGTATGGTTTGAATGTCTGTGGTGATTccaataataactgcatgaaaacttaaaaattaaaa
>XM_026941752.2
CAACACTGTACCAGAGCCACAGCACAGGACTGGCTGCCCTGTGCATGCTGTGAAAGACAGAGGTTGTGTAGAGGAGCAATTCTACTGGGCAGAACTGCACCACATCACATACACTGGAATTAGTGTCTGAGGTGCACAAATATAAAACGTGCCTGGCAGAACAAGATAAAGGTGCATGAAAGCAACAGTGTGACTGTAGGATGAAGCATCTGTAGGAGGAGAGCAGGCTGAAGTCTGAATAGAGGGACACAAGATTGGACCTTGAGCAGTGACATTCAAGGGGTAGAGTGAGCTGAAAAGACTGAAGAGAGATTTAAGTACTGTTCGTGTTTAAGCCTCCCAGTCCAGCAGACTCATGGCTAGCAACAACACTGCCAGCATCGCCCAGGCACGTAAACTGGTGGAACAGCTCAAGATGGAAGCTAACATTGACCGTATAAagGTGTCTAAAGCGGCTGCAGACCTGATGTCATACTGCGAAGCTCACGCTAAGGAGGACCCTCTGCTGTCACCTGTGCCTGCTTCTGAGAATCCCTTCAGGGAGAAGAAGTTCTTCTGTGCCATCCTGTAAGCAGTGATGGCTGGCCTTGGGCATGCCTGCTCCATCTGGGACCCACACACATTGATGTTAAGAACGAAAACCTTTTAGCGAGGGCTGAGGGGCAGGCGTGCAGTGACTCCTCAACCTCACCTGGTTCTCCATGCTCCCCGTGCAAAACCCCAGCATGGAGGGAGGGCCAGAGCTGTGCATGTTTACAAGGGAAAGCACAGCCAACATGAGCAACTGGCTTTACAGCAGCTCAAGCTGGATATGATGTGTAAATTGCAGTATTAATGCGGTATTTTGTGGTCCCTATGAGGtattcaaatgttttgtttgattAAATTAAGTTGATCATGATTTCGAAGCTGATCACTGAGCAAAGAACCATGGATTGCCATGGAAATGTTCTGATTTCTTCTTTGTTTGCTCTATTTCAATAATCATTGATTTCTCTTAAATGAATCTGGTATATATGACTTAGGTAGCTTTCTAtgtatgtactttttttaatttaataataatagataggTAAACGCATTTTTTTATGAAAGATTTGCACACATACAAATATTCCTAACAGATACGTATCTTTATGAAACTGATTACAACATTTGAATATGTATAGCAggcaatttaattttttgtctCCTTCAAAAAGATAGGTCTTTTTACTATTTGTAAAAATCAACTGTGTTGTGCTGTATGGTTTGAATGTCTGTGGTGATTccaataataactgcatgaaaacttaaaaattaaaa

Function

symbol description
gng2 Predicted to enable G-protein beta-subunit binding activity. Acts upstream of or within sprouting angiogenesis and vascular endothelial growth factor receptor signaling pathway. Located in cytosol and membrane. Is expressed in cardiovascular system and nervous system. Orthologous to human GNG2 (G protein subunit gamma 2).

NR:

description
Guanine nucleotide-binding protein GI/GS/GO subunit gamma-2

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0002040 sprouting angiogenesis biological_process
GO:0048010 vascular endothelial growth factor receptor signaling pathway biological_process
GO:0005829 cytosol cellular_component
GO:0005834 heterotrimeric G-protein complex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K07826 GNG2; guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2

RNA

RNA id representative length rna type GC content exon number start site end site
TU58943 False 1237 TUCP 0.43 4 20357988 20369097
TU58944 False 1291 TUCP 0.41 4 20357934 20369097
TU58946 False 1271 TUCP 0.43 4 20357988 20369429
XM_026941743.2 False 1270 mRNA 0.42 4 20357970 20369112
XM_026941752.2 True 1305 mRNA 0.43 4 20357970 20369445

Neighbor

gene id symbol gene type direction distance location
gabra2a gabra2,si:dkey-52k1.6,LOC108262858,LOC107747556,LOC107666515,LOC107569424 coding downstream 14432 20327905 ~ 20343502 (-)
gabrg1 gabrg1,si:dkey-155h10.3,LOC107747559,LOC107667066,LOC107666522,LOC107585224,LOC107569420,LOC107733747 coding downstream 40765 20309844 ~ 20317169 (-)
gabrb1 gabrb1,LOC107666521,LOC107747557,LOC107733746,LOC107585222,LOC107667065 coding downstream 78892 20262035 ~ 20279042 (-)
dapp1 dapp1,LOC107667071,LOC107747563,LOC107666557,LOC107585227 coding downstream 134253 20217216 ~ 20223681 (-)
rrh rrh coding downstream 148642 20205863 ~ 20209292 (-)
trim8a LOC108263671 coding upstream 58426 20427871 ~ 20442232 (-)
sufu sufu,LOC107666454 coding upstream 75975 20445420 ~ 20461102 (-)
desi2 desi2,LOC107587845,LOC107747542,LOC107733777,LOC107585270 coding upstream 185048 20554493 ~ 20573783 (-)
zbtb18 zbtb18 coding upstream 250487 20619932 ~ 20629167 (-)
sdccag8 sdccag8,LOC108263444 coding upstream 380227 20749672 ~ 20802069 (-)
LOC113537651 NA non-coding downstream 6458 20349410 ~ 20351476 (-)
G49700 NA non-coding downstream 141504 20215653 ~ 20216430 (-)
G49661 NA non-coding downstream 173645 20181078 ~ 20184289 (-)
G49605 NA non-coding downstream 293423 20064256 ~ 20064511 (-)
G49606 NA non-coding downstream 332270 20020687 ~ 20025664 (-)
G49806 NA non-coding upstream 94448 20463893 ~ 20464950 (-)
G49836 zmp:0000000662,LOC108263473,LOC108421699,LOC107747548,LOC107569423,LOC107666523 non-coding upstream 103032 20472477 ~ 20473295 (-)
G49841 LOC108263473 non-coding upstream 108263 20477708 ~ 20478688 (-)
G49941 NA non-coding upstream 130088 20499533 ~ 20500791 (-)
G49942 manba non-coding upstream 131351 20500796 ~ 20502665 (-)
atp10d atp10d,LOC107556926 other downstream 101414 20224909 ~ 20256520 (-)
metap1 metap1,LOC107556924 other downstream 152341 20182053 ~ 20205593 (-)
slc4a11 slc4a11,LOC107695019 other downstream 589800 19716600 ~ 19768134 (-)
atrn atrn,LOC107568639,LOC107693325,LOC107695011 other downstream 690273 19614717 ~ 19667661 (-)
G49195 rab11fip5,LOC108263817,LOC107582533,LOC107733767 other downstream 1038201 19316487 ~ 19319733 (-)
prkceb prkceb,prkce,LOC108263296,LOC108422423,LOC107699301,LOC107727364,LOC107708403 other upstream 1018298 21387743 ~ 21478705 (-)
plekhh2 plekhh2 other upstream 1242218 21611663 ~ 21645512 (-)
G50837 NA other upstream 1580410 21949855 ~ 21950189 (-)
LOC113540944 eml4,LOC107586470,LOC107698167 other upstream 1665840 22035285 ~ 22123649 (-)
LOC113541574 LOC108263228 other upstream 2196326 22565771 ~ 22571868 (-)

Expression


Co-expression Network