camkmt (camkmt,si:ch73-54n14.2,LOC107602502,LOC107666367,LOC107711417)


Basic Information

Item Value
gene id camkmt
gene name camkmt,si:ch73-54n14.2,LOC107602502,LOC107666367,LOC107711417
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 21025733 ~ 21118964 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU59354
tataaaggtaCTATGTAGGTacccttcaaataaagtgtcAACAAATAGGTTTATGGTTGAGGTTTCAAAGTATGTTGTAGGTAGAAAAACCTAATTTTGTCCAAAAtccattttttctctttgtctttttttttggctgtttacCAGAATTCAGCCGCAGCTACATCTGACAGGTTTTTACCAGGCCGCCACGTATATATTTGGAGAACTGAATATCACTTGCTTCACTGTGACTCACTCTCGCTGCTCATCTTTAAGTAAGACTTTAAGTGAGAATATCATGTGCCAAACCATCCTATCTGTCCGCAGACCTCACAGAGTTACATAGCTTACAAGAAAGACCTTTACCACTGTTCTGGATTGCTGTGTGTTATATGGATATGTTCAGCCTGACATTAACCTGTGTGCAAATGAGGAAATGCAGTATGAATTACAGGCTCTTCCACTATATGGTCTAGCCAGCCTTTCAAATGAAGTATTCCAGGGGAAGTATCTGTGTTAAGTAAGGACTCAGTATAAAAATAGGGGAGGGGGGTTGTTTGGAAGTTTTTCCAGTGATCcgaataataaactttttttgaCTGCCATATTATTACCTTGAATTCAAACTGTATACAGACTGTATGTCAATTAAGGAATAACATAACATATCAGGATATTAAGTATTATCATAAAGTATTTCATGTTCAGAGGTTTTGCCCACTGTAAAAGCCGTTCAACTGTTCATACTGAGCTGAGAAATCATTCACTTGACATCAGAGCTGCAATTGTTTGAGTTATTTGATCATCTTGTTTTTCTGG
>XM_026936906.2
GAAGTATGCGGAAGTAGCGCGCTTCATGGGCTGGCTACGGGGTGCCTTGGTTACCGGCAAATTGTGACAGTTTATTTATaactcattgtgtgtgtttttgtacaatATAAGCAGTTGTAAACGATAATATTAGTGCAGTTAGGGTATTCACTCTACAGACACTGTATTTTATTGGGTATTTAAGTGAGAAATGGAGTCAAAGCCAACAGGTAGCCCGGGAATGACAGAATTCAAAGATGCTCCATTGCCGGAAATGCATGTAAACAAGCACCAGGCTCCGGATTCACACTGTGGCACGGACGCAGCTCGCGCCAGGTGGACAATTCTCCGACAGgTATTGAGACAGAAGCAGCTCGATAGTATCAAGGTTCAGCCAGTATCAGTTCGCAGGTTCTCCTCCTTCAACCTGTTCTCCAGGACAGAGGTTCCCTCACTGGAGAGCGATGGCCCATCTGATGGCCGGTGGATTGAGTACAGAAGTGCCTGCTTTCCCCAGTACAGTGCCTTAATCAGAGACAGCCATGGGCCGATTAAAATGGAGGAGGTGCTCAGCAGCTTTGACAACACCGGAAACGTCTGTGTTTGGCCCTCTGAAGAGGTGATGGCCTACTACTGTCTGAAGAATCGCCATATGTTTACGGGTTCCTCTGTGTGTGAATTAGGTGGAGGGATGACATGTCTTGCTGGGCTCATGATTGCCGTTTGCGCTGATGTGAAGGAAGTGCTGCTATCTGATGGTAATGAGAAGGCCATCGAGAATGTGCGTGGGGTTATCGAGAGGAATAGACGAGCCGGACTGTTCACCTGCACTGATGTGTCCAGCAGGGTGGTGAGATGGGACAGTGAGCGGGACGTGTCCACGATGGAGGGCCGCTTCGACGTGGTCATGTGTGCTGATTGCCTGTTTCTCGACCAGTACAGAGCCTGCCTGGTTGATGCTCTAAGGAGATTACTGCGGCctgatggCACAGCATTGGTGTTTGCCCCTACGAGGGGAGACACACTGACAGAATTCTGTAGACTGGCAGAAAGAGCAGGACTCCTAGTGTGTCGCTATGACAACTACGACTCAATCATATGGGACCTGCATATAAAGatgaaaagagagggaaaggagGCATATGACGAGAACATCCACTATCCTGTGCTGCTCACCCTCACCCACATACCCAGTCCACGCCTGCTGTGAACCTGGCAGACCTCCGCTGTGCCACCCCCTGGCTCTGCCACTGTGATACCCAGGGTTTACTCAACCTAGCCTTTCTCACTCTTTTATCCATAatgcttttaaaacacacagtatGTGTCGGAGTGTGTGGGATTCAGCTGCTGTGTGAACTCATGCCTGACCTTGTTACTGTGCAATAAGAAGTGTGTAAAACAGAGGCAAGGCCACACGGAGCACAGCCGTCTTCCTGAGGACTGTGTGTACTGAAAATAGCttaactgtaatatttttatatgttgcagTGAATATTGCTATTTTGAACAGGCACctgatggatgggtgggtgcTTAATGGCATGGCTTATTGCATAATAGTTGGCCTAATTATGCACTTCATGCATAAATCAATCTAATGCTACTGTGCATAATCACTAGTTTATTCCATTCATCATTTAGCACTGgacaaggaaagaaaataaatgttaggcgacctgggaaaacccttcacatggtgaaatctTTACTATATATTGTTCTGAAACCTACAGGCTTTCCTAAACATTTAAAGATTACATTCCAACTGCATTGCAGATAAACCCGGAAATTCACTGTGCAAGGAATTCACACTTAGCTAGACAGAGTGCATGTTTTTCTACAGCTTTTGTTAAACTGGTTCCTTCCCAACATAATGTTTGCAGGAAGTTGTCCTACActtgattaaaaagtaaataaaaacatagtggatttataacacattcataagcactgcataaatattttacagagtGTTGCTGGAGAAGTTATGAAGGGCTTATGCCAATATGTGCAAGATGACATTGGAGGTTTTATGTAACTTTGTCTTTACATGGAAATATAACTCTGTGTTCCTATAAGAAGTAGATACTGTAATAAAGTATTGGTAAAAATGTGTCCATCTGCCATTGTACCATTTGTCAGATGTACTTATGAGGTATCTACTTGATATAGGAGCATGGACTTGAATGCTCAGTCCATTTGTATTGAAATGATTGAGGAGCCCCATTTTGCTACAGCTTATTATTTATGAAGCTCATGTGCCAGctacataaataattttaatgccCACAAActataatattaatgaataaatttataacACTTTCATGAAGCACTGTGTGCACCAAATTTCctgaatgtgctgttagtaaAAACAAGCTAGTAACTGGCAAGAtatggatgaaaaaaattacactaaCTCAGTTTCTTGATCCATCAACTCCTAATGATAATCGATGGCTGTTGTTGTGCTCGCTTCTCTCTTCGTAAAGACAAAGTTGTATAAAACCTCTGATATCATCTTACTCTCTATGACATAAGCCTTTCATAAATTCTCCAGCaatgctttataaaatatttatgccatgcttatgaatgtgttataaaggtaCTATGTAGGTacccttcaaataaagtgtcAACAAATAGGTTTATGGTTGAGGTTTCAAAGTATGTTGTAGGTAGAAAAACCTAATTTTGTCCAAAAtccattttttctctttgtctttttttttggctgtttacCAGAATTCAGCCGCAGCTACATCTGACAGGTTTTTACCAGGCCGCCACGTATATATTTGGAGAACTGAATATCACTTGCTTCACTGTGACTCACTCTCGCTGCTCATCTTTAAGTAAGACTTTAAGTGAGAATATCATGTGCCAAACCATCCTATCTGTCCGCAGACCTCACAGAGTTACATAGCTTACAAGAAAGACCTTTACCACTGTTCTGGATTGCTGTGTGTTATATGGATATGTTCAGCCTGACATTAACCTGTGTGCAAATGAGGAAATGCAGTATGAATTACAGGCTCTTCCACTATATGGTCTAGCCAGCCTTTCAAATGAAGTATTCCAGGGGAAGTATCTGTGTTAAGTAAGGACTCAGTATAAAAATAGGGGAGGGGGGTTGTTTGGAAGTTTTTCCAGTGATCcgaataataaactttttttgaCTGCCATATTATTACCTTGAATTCAAACTGTATACAGACTGTATGTCAATTAAGGAATAACATAACATATCAGGATATTAAGTATTATCATAAAGTATTTCATGTTCAGAGGTTTTGCCCACTGTAAAAGCCGTTCAACTGTTCATACTGAGCTGAGAAATCATTCACTTGACATCAGAGCTGCAATTGTTTGAGTTATTTGATCATCTTGTTTTTCTGGGCTTCGTGTTTCTGCACTGTGACTGATGAGTCTAAAGTGATTGTTTTACACTAATGGAGCAGGTGCTTGTAATGACTgtgattaaatcattatttgaAACAG
>XM_026936915.2
TTGATAAGTAAGCTATCAGGCTGGCGGATAAATAGCAGAGCAAAGATTAGTGTCGGCCCCCGGCGTGTGTCCATGCCAATGGAGCTGTGGCTCTCCTCCTTCACTCGTTATAGGCTGCACACAGGCACCCTTAGCCAAAAAGGTTGTTTACTGAGAGAGGAGGACAGGCCTTATCTGCTCACCACAGTGTTGCAGACTGCCACTCTAAAAAACACACTTGTGTGCATAGCTGGGCAAAGCAGCACGCTTTCCCTGCTCCCTCCCTTTTCCTGTCATTTTGGTGTTTGGCCCTCTGAAGAGGTGATGGCCTACTACTGTCTGAAGAATCGCCATATGTTTACGGGTTCCTCTGTGTGTGAATTAGGTGGAGGGATGACATGTCTTGCTGGGCTCATGATTGCCGTTTGCGCTGATGTGAAGGAAGTGCTGCTATCTGATGGTAATGAGAAGGCCATCGAGAATGTGCGTGGGGTTATCGAGAGGAATAGACGAGCCGGACTGTTCACCTGCACTGATGTGTCCAGCAGGGTGGTGAGATGGGACAGTGAGCGGGACGTGTCCACGATGGAGGGCCGCTTCGACGTGGTCATGTGTGCTGATTGCCTGTTTCTCGACCAGTACAGAGCCTGCCTGGTTGATGCTCTAAGGAGATTACTGCGGCctgatggCACAGCATTGGTGTTTGCCCCTACGAGGGGAGACACACTGACAGAATTCTGTAGACTGGCAGAAAGAGCAGGACTCCTAGTGTGTCGCTATGACAACTACGACTCAATCATATGGGACCTGCATATAAAGatgaaaagagagggaaaggagGCATATGACGAGAACATCCACTATCCTGTGCTGCTCACCCTCACCCACATACCCAGTCCACGCCTGCTGTGAACCTGGCAGACCTCCGCTGTGCCACCCCCTGGCTCTGCCACTGTGATACCCAGGGTTTACTCAACCTAGCCTTTCTCACTCTTTTATCCATAatgcttttaaaacacacagtatGTGTCGGAGTGTGTGGGATTCAGCTGCTGTGTGAACTCATGCCTGACCTTGTTACTGTGCAATAAGAAGTGTGTAAAACAGAGGCAAGGCCACACGGAGCACAGCCGTCTTCCTGAGGACTGTGTGTACTGAAAATAGCttaactgtaatatttttatatgttgcagTGAATATTGCTATTTTGAACAGGCACctgatggatgggtgggtgcTTAATGGCATGGCTTATTGCATAATAGTTGGCCTAATTATGCACTTCATGCATAAATCAATCTAATGCTACTGTGCATAATCACTAGTTTATTCCATTCATCATTTAGCACTGgacaaggaaagaaaataaatgttaggcgacctgggaaaacccttcacatggtgaaatctTTACTATATATTGTTCTGAAACCTACAGGCTTTCCTAAACATTTAAAGATTACATTCCAACTGCATTGCAGATAAACCCGGAAATTCACTGTGCAAGGAATTCACACTTAGCTAGACAGAGTGCATGTTTTTCTACAGCTTTTGTTAAACTGGTTCCTTCCCAACATAATGTTTGCAGGAAGTTGTCCTACActtgattaaaaagtaaataaaaacatagtggatttataacacattcataagcactgcataaatattttacagagtGTTGCTGGAGAAGTTATGAAGGGCTTATGCCAATATGTGCAAGATGACATTGGAGGTTTTATGTAACTTTGTCTTTACATGGAAATATAACTCTGTGTTCCTATAAGAAGTAGATACTGTAATAAAGTATTGGTAAAAATGTGTCCATCTGCCATTGTACCATTTGTCAGATGTACTTATGAGGTATCTACTTGATATAGGAGCATGGACTTGAATGCTCAGTCCATTTGTATTGAAATGATTGAGGAGCCCCATTTTGCTACAGCTTATTATTTATGAAGCTCATGTGCCAGctacataaataattttaatgccCACAAActataatattaatgaataaatttataacACTTTCATGAAGCACTGTGTGCACCAAATTTCctgaatgtgctgttagtaaAAACAAGCTAGTAACTGGCAAGAtatggatgaaaaaaattacactaaCTCAGTTTCTTGATCCATCAACTCCTAATGATAATCGATGGCTGTTGTTGTGCTCGCTTCTCTCTTCGTAAAGACAAAGTTGTATAAAACCTCTGATATCATCTTACTCTCTATGACATAAGCCTTTCATAAATTCTCCAGCaatgctttataaaatatttatgccatgcttatgaatgtgttataaaggtaCTATGTAGGTacccttcaaataaagtgtcAACAAATAGGTTTATGGTTGAGGTTTCAAAGTATGTTGTAGGTAGAAAAACCTAATTTTGTCCAAAAtccattttttctctttgtctttttttttggctgtttacCAGAATTCAGCCGCAGCTACATCTGACAGGTTTTTACCAGGCCGCCACGTATATATTTGGAGAACTGAATATCACTTGCTTCACTGTGACTCACTCTCGCTGCTCATCTTTAAGTAAGACTTTAAGTGAGAATATCATGTGCCAAACCATCCTATCTGTCCGCAGACCTCACAGAGTTACATAGCTTACAAGAAAGACCTTTACCACTGTTCTGGATTGCTGTGTGTTATATGGATATGTTCAGCCTGACATTAACCTGTGTGCAAATGAGGAAATGCAGTATGAATTACAGGCTCTTCCACTATATGGTCTAGCCAGCCTTTCAAATGAAGTATTCCAGGGGAAGTATCTGTGTTAAGTAAGGACTCAGTATAAAAATAGGGGAGGGGGGTTGTTTGGAAGTTTTTCCAGTGATCcgaataataaactttttttgaCTGCCATATTATTACCTTGAATTCAAACTGTATACAGACTGTATGTCAATTAAGGAATAACATAACATATCAGGATATTAAGTATTATCATAAAGTATTTCATGTTCAGAGGTTTTGCCCACTGTAAAAGCCGTTCAACTGTTCATACTGAGCTGAGAAATCATTCACTTGACATCAGAGCTGCAATTGTTTGAGTTATTTGATCATCTTGTTTTTCTGGGCTTCGTGTTTCTGCACTGTGACTGATGAGTCTAAAGTGATTGTTTTACACTAATGGAGCAGGTGCTTGTAATGACTgtgattaaatcattatttgaAACAG

Function

symbol description
camkmt Predicted to enable calmodulin-lysine N-methyltransferase activity. Predicted to act upstream of or within methylation. Predicted to be located in cytoplasm and nucleus.
si:ch73-54n14.2 Predicted to enable calmodulin-lysine N-methyltransferase activity.

NR:

description
calmodulin-lysine N-methyltransferase

GO: NA

KEGG:

id description
K18826 CAMKMT; calmodulin-lysine N-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU59354 False 801 lncRNA 0.37 1 21118062 21118862
XM_026936906.2 True 3486 mRNA 0.42 11 21025733 21118964
XM_026936915.2 False 3188 mRNA 0.41 9 21087941 21118964

Neighbor

gene id symbol gene type direction distance location
slc3a1 slc3a1,LOC107585281,LOC107579201 coding upstream 15143 21002369 ~ 21010590 (+)
trnae-cuc_10 NA coding upstream 20214 21005450 ~ 21005519 (+)
ppm1ba ppm1b,LOC107733761,LOC107585253,LOC107698745,LOC107747533,LOC107666482 coding upstream 29355 20986889 ~ 20996378 (+)
abcg8 abcg8,LOC107666472 coding upstream 140021 20877886 ~ 20885712 (+)
cep170aa cep170 coding upstream 170031 20802370 ~ 20855702 (+)
six3a six3,LOC107733790,LOC107585256 coding downstream 61971 21180935 ~ 21183818 (+)
socs5b LOC108263298,LOC108422458,LOC107727375 coding downstream 361735 21480699 ~ 21501499 (+)
prop1 LOC108263276 coding downstream 398822 21517786 ~ 21522535 (+)
ttc7a ttc7a,LOC107586483,LOC107699274 coding downstream 412307 21531271 ~ 21560099 (+)
epcam NA coding downstream 487421 21606385 ~ 21609142 (+)
G50140 NA non-coding upstream 74742 20950570 ~ 20950991 (+)
G49857 NA non-coding upstream 309436 20619938 ~ 20716297 (+)
G49864 NA non-coding upstream 436503 20585604 ~ 20589230 (+)
G49863 NA non-coding upstream 440233 20580801 ~ 20585500 (+)
G49853 NA non-coding upstream 501684 20523816 ~ 20524049 (+)
G50284 NA non-coding downstream 60642 21179606 ~ 21179811 (+)
G50297 NA non-coding downstream 79313 21198277 ~ 21198508 (+)
G50310 six2,six2a,LOC107666385,LOC107602488,LOC107602487 non-coding downstream 87430 21206394 ~ 21210115 (+)
G50311 NA non-coding downstream 91873 21210837 ~ 21213946 (+)
G50384 NA non-coding downstream 194240 21313204 ~ 21350033 (+)
G49862 NA other upstream 450254 20574973 ~ 20575479 (+)
pprc1 LOC108263826,LOC108421584 other upstream 633132 20382346 ~ 20392601 (+)
sfxn5a sfxn5,sfxn5a,LOC108262907,LOC107567846,LOC107733701,LOC107690191 other upstream 1669635 19341350 ~ 19356098 (+)
LOC113539574 htra2,LOC108263241,LOC108441752,LOC107582530,LOC107690150,LOC107733689,LOC105899646,LOC106589831 other upstream 1763645 19256064 ~ 19262088 (+)
grxcr1b LOC108263619 other upstream 1808457 19214207 ~ 19217276 (+)
wu:fj16a03 NA other downstream 901358 22020322 ~ 22023811 (+)
LOC113538739 qki,LOC107696379,LOC107559772,LOC106605787,LOC107739475 other downstream 1366346 22485310 ~ 22552752 (+)
G51271 znf318 other downstream 1665364 22784328 ~ 22786505 (+)
LOC113540861 LOC108263311 other downstream 1792180 22911144 ~ 22913552 (+)
G51562 NA other downstream 2335464 23454428 ~ 23455549 (+)

Expression


Co-expression Network