G51390


Basic Information

Item Value
gene id G51390
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 22890297 ~ 22890507 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU60769
TTCATTTCTAAGTCACATTTATTGTAGATTTCTTCAAGGTCTCTTTGGTATCTATCACTGCTTGTGACACTATAGTGTTACCCTGTACACTGAGAAGACAATAAACctgaatttaattgaactgaataCCTTGGCAATAATCTCCTATTCCATAAGGTGGAGTGGACATTTCTTTCTCTAGCAAATCAATTATGATATATTTGTGACAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60769 True 211 lncRNA 0.34 1 22890297 22890507

Neighbor

gene id symbol gene type direction distance location
LOC113540882 cul9 coding downstream 23854 22826230 ~ 22866443 (-)
si:dkeyp-121d4.3 LOC108263047 coding downstream 75349 22791183 ~ 22814948 (-)
ppp2r5d ppp2r5d,LOC106605890 coding downstream 118340 22746734 ~ 22771957 (-)
LOC113540936 dnph1 coding downstream 147822 22738208 ~ 22742475 (-)
LOC113540869 dnph1 coding downstream 160990 22726906 ~ 22729307 (-)
apmap apmap,LOC107702698,LOC107717839,LOC107564208,LOC107559784 coding upstream 23312 22913819 ~ 22923740 (-)
ppm1g ppm1g,LOC107660231,LOC107717838,LOC107702697,LOC107754752 coding upstream 37138 22927645 ~ 22934861 (-)
fam120b fam120b coding upstream 74213 22964720 ~ 22977643 (-)
phf10 phf10,LOC106589650 coding upstream 141691 23032198 ~ 23049124 (-)
c1d c1d coding upstream 781912 23672419 ~ 23679981 (-)
G51389 NA non-coding downstream 23 22890059 ~ 22890274 (-)
G51289 mea1 non-coding downstream 147025 22647350 ~ 22743272 (-)
G51276 NA non-coding downstream 282260 22605547 ~ 22608037 (-)
G51169 qki,LOC107739475,LOC107565601,LOC107669572 non-coding downstream 343807 22544227 ~ 22546490 (-)
LOC117596869 NA non-coding downstream 712966 22165739 ~ 22177331 (-)
G51462 NA non-coding upstream 179836 23070343 ~ 23070721 (-)
LOC113539667 NA non-coding upstream 325341 23215848 ~ 23218757 (-)
G51523 NA non-coding upstream 369689 23260196 ~ 23266336 (-)
G51557 NA non-coding upstream 523173 23413680 ~ 23413941 (-)
G51577 NA non-coding upstream 566993 23457500 ~ 23457991 (-)
znf318 znf318 other downstream 101493 22774355 ~ 22788804 (-)
LOC113541574 LOC108263228 other downstream 318429 22565771 ~ 22571868 (-)
LOC113540944 eml4,LOC107586470,LOC107698167 other downstream 766648 22035285 ~ 22123649 (-)
G50837 NA other downstream 940108 21949855 ~ 21950189 (-)
plekhh2 plekhh2 other downstream 1244785 21611663 ~ 21645512 (-)
G51576 NA other upstream 557401 23447908 ~ 23454217 (-)
mlh1 mlh1,LOC104940895,LOC107676366,LOC104940890 other upstream 1126389 24016896 ~ 24040100 (-)
LOC113545393 ccdc85a,LOC107716311,LOC107585341 other upstream 1217844 24108351 ~ 24132483 (-)
lyst lyst,LOC107569426 other upstream 1561479 24451986 ~ 24651847 (-)
herc4 herc4,LOC107689351 other upstream 1771478 24661985 ~ 24735888 (-)

Expression


Co-expression Network