G51462


Basic Information

Item Value
gene id G51462
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 23070343 ~ 23070721 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU60844
TTTAGAAATCATGGTCTTTATTTAAATCAGCATTAGGCAGTTATGCTATGATCAAAAAAAGAGCAATAGGAGATCCAGCCACATCAACTGCCCTTGGCACCagataaacatttatggaaatgtACATACAGACAGCAAGAGGTGCCTCAAGTATACATGAGGCCCCGACACtcacacatgaaaaaaaattaaccccATAATATTTCCATGTCTATCCatcacatatttattcatttcacaaGCATCAGTCATACTAGATTCCCCCTTCGGTTACAAAGTGACTCATTTTGTCTTAACTTTACTAGACTACACACTGATGCATTCTATGCCAGACAGTCTGAATAATGCACTGCAAAAGACaaaatgtaatgcaaaaaaa

Function

GO:

id name namespace
GO:0006820 anion transport biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU60844 True 379 lncRNA 0.37 1 23070343 23070721

Neighbor

gene id symbol gene type direction distance location
phf10 phf10,LOC106589650 coding downstream 21219 23032198 ~ 23049124 (-)
fam120b fam120b coding downstream 92700 22964720 ~ 22977643 (-)
ppm1g ppm1g,LOC107660231,LOC107717838,LOC107702697,LOC107754752 coding downstream 135482 22927645 ~ 22934861 (-)
apmap apmap,LOC107702698,LOC107717839,LOC107564208,LOC107559784 coding downstream 146603 22913819 ~ 22923740 (-)
LOC113540882 cul9 coding downstream 203900 22826230 ~ 22866443 (-)
c1d c1d coding upstream 601698 23672419 ~ 23679981 (-)
kifc1 kifc1,LOC108261151,LOC108261048,LOC108261613 coding upstream 656431 23727152 ~ 23750761 (-)
mgme1 mgme1 coding upstream 767218 23837939 ~ 23840860 (-)
mrpl14 mrpl14,LOC102799944 coding upstream 791998 23862719 ~ 23867530 (-)
arid4b arid4b,LOC107690809,LOC102789854 coding upstream 1119697 24190418 ~ 24316428 (-)
G51390 NA non-coding downstream 179836 22890297 ~ 22890507 (-)
G51389 NA non-coding downstream 180069 22890059 ~ 22890274 (-)
G51289 mea1 non-coding downstream 327071 22647350 ~ 22743272 (-)
G51276 NA non-coding downstream 462306 22605547 ~ 22608037 (-)
G51169 qki,LOC107739475,LOC107565601,LOC107669572 non-coding downstream 523853 22544227 ~ 22546490 (-)
LOC113539667 NA non-coding upstream 145127 23215848 ~ 23218757 (-)
G51523 NA non-coding upstream 189475 23260196 ~ 23266336 (-)
G51557 NA non-coding upstream 342959 23413680 ~ 23413941 (-)
G51577 NA non-coding upstream 386779 23457500 ~ 23457991 (-)
G51579 NA non-coding upstream 396225 23466946 ~ 23470699 (-)
znf318 znf318 other downstream 281539 22774355 ~ 22788804 (-)
LOC113541574 LOC108263228 other downstream 498475 22565771 ~ 22571868 (-)
LOC113540944 eml4,LOC107586470,LOC107698167 other downstream 946694 22035285 ~ 22123649 (-)
G50837 NA other downstream 1120154 21949855 ~ 21950189 (-)
plekhh2 plekhh2 other downstream 1424831 21611663 ~ 21645512 (-)
G51576 NA other upstream 377187 23447908 ~ 23454217 (-)
mlh1 mlh1,LOC104940895,LOC107676366,LOC104940890 other upstream 946175 24016896 ~ 24040100 (-)
LOC113545393 ccdc85a,LOC107716311,LOC107585341 other upstream 1037630 24108351 ~ 24132483 (-)
lyst lyst,LOC107569426 other upstream 1381265 24451986 ~ 24651847 (-)
herc4 herc4,LOC107689351 other upstream 1591264 24661985 ~ 24735888 (-)

Expression


Co-expression Network