Item | Value |
---|---|
gene id | G51501 |
gene name | NA |
gene type | non-coding |
species | striped catfish (Pangasianodon hypophthalmus) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_047597.1 |
NCBI id | CM018543.1 |
chromosome length | 33776708 |
location | 23207115 ~ 23275341 (+) |
genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU60889 | True | 1397 | lncRNA | 0.41 | 3 | 23207115 | 23275341 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC113545030 | NA | coding | upstream | 92076 | 23114185 ~ 23115039 (+) |
spred2b | spred2,LOC108263653 | coding | upstream | 105981 | 23071308 ~ 23101134 (+) |
actr2b | actr2,LOC108423375,LOC104930021,LOC107660226,LOC105008543 | coding | upstream | 137471 | 23052228 ~ 23069644 (+) |
dld | dll1,dld,LOC107717858,LOC107702673,LOC107660228 | coding | upstream | 220318 | 22981602 ~ 22986797 (+) |
si:zfos-1056e6.1 | LOC108263310 | coding | upstream | 279565 | 22924521 ~ 22927550 (+) |
si:dkey-78p8.1 | NA | coding | downstream | 152676 | 23428017 ~ 23450991 (+) |
lrrfip2 | lrrfip2,LOC107679173 | coding | downstream | 592810 | 23868151 ~ 23999400 (+) |
LOC117596572 | NA | coding | downstream | 858282 | 24133623 ~ 24136847 (+) |
ggps1 | ggps1,LOC107728322 | coding | downstream | 1041362 | 24316703 ~ 24345368 (+) |
cacul1 | cacul1 | coding | downstream | 1141149 | 24416490 ~ 24440455 (+) |
G51425 | NA | non-coding | upstream | 61978 | 23072956 ~ 23145137 (+) |
G51426 | NA | non-coding | upstream | 130644 | 23074730 ~ 23076471 (+) |
G51422 | NA | non-coding | upstream | 136402 | 23070321 ~ 23070713 (+) |
G51358 | NA | non-coding | upstream | 248495 | 22958400 ~ 22958620 (+) |
LOC117596907 | NA | non-coding | upstream | 470448 | 22729322 ~ 22736667 (+) |
G51511 | NA | non-coding | downstream | 2582 | 23277923 ~ 23361488 (+) |
G51564 | NA | non-coding | downstream | 181668 | 23457009 ~ 23457309 (+) |
G51561 | NA | non-coding | downstream | 184272 | 23459613 ~ 23460865 (+) |
G51565 | NA | non-coding | downstream | 188912 | 23464253 ~ 23465415 (+) |
G51568 | NA | non-coding | downstream | 199587 | 23474928 ~ 23475797 (+) |
LOC113540861 | LOC108263311 | other | upstream | 293563 | 22911144 ~ 22913552 (+) |
G51271 | znf318 | other | upstream | 420610 | 22784328 ~ 22786505 (+) |
LOC113538739 | qki,LOC107696379,LOC107559772,LOC106605787,LOC107739475 | other | upstream | 654363 | 22485310 ~ 22552752 (+) |
wu:fj16a03 | NA | other | upstream | 1183304 | 22020322 ~ 22023811 (+) |
camkmt | camkmt,si:ch73-54n14.2,LOC107602502,LOC107666367,LOC107711417 | other | upstream | 2088151 | 21025733 ~ 21118964 (+) |
G51562 | NA | other | downstream | 179087 | 23454428 ~ 23455549 (+) |
G51749 | NA | other | downstream | 421691 | 23697032 ~ 23697294 (+) |
slc29a3 | slc29a3 | other | downstream | 518339 | 23793680 ~ 23834851 (+) |
LOC113540163 | NA | other | downstream | 779813 | 24055154 ~ 24057898 (+) |
b3galnt2 | b3galnt2 | other | downstream | 1074843 | 24350184 ~ 24402454 (+) |