Gene
RNA
| Item | Value |
|---|---|
| gene id | G51749 |
| gene name | NA |
| gene type | unknown |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 23697032 ~ 23697294 (+) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU61166 | True | 263 | TUCP | 0.59 | 1 | 23697032 | 23697294 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-78p8.1 | NA | coding | upstream | 246041 | 23428017 ~ 23450991 (+) |
| meis1b | meis1,meis1b,LOC108423396,LOC107582672,LOC107660223,LOC108263472,LOC106613898,LOC101073206,LOC103387108,LOC107551348 | coding | upstream | 420716 | 23220121 ~ 23276316 (+) |
| LOC113545030 | NA | coding | upstream | 581993 | 23114185 ~ 23115039 (+) |
| spred2b | spred2,LOC108263653 | coding | upstream | 595898 | 23071308 ~ 23101134 (+) |
| actr2b | actr2,LOC108423375,LOC104930021,LOC107660226,LOC105008543 | coding | upstream | 627388 | 23052228 ~ 23069644 (+) |
| lrrfip2 | lrrfip2,LOC107679173 | coding | downstream | 170857 | 23868151 ~ 23999400 (+) |
| LOC117596572 | NA | coding | downstream | 436329 | 24133623 ~ 24136847 (+) |
| ggps1 | ggps1,LOC107728322 | coding | downstream | 619409 | 24316703 ~ 24345368 (+) |
| cacul1 | cacul1 | coding | downstream | 719196 | 24416490 ~ 24440455 (+) |
| gpatch11 | gpatch11 | coding | downstream | 1485859 | 25183153 ~ 25191848 (+) |
| LOC113544527 | NA | non-coding | upstream | 45905 | 23640352 ~ 23651127 (+) |
| LOC117596653 | NA | non-coding | upstream | 80193 | 23612605 ~ 23616839 (+) |
| G51570 | NA | non-coding | upstream | 212199 | 23484478 ~ 23484833 (+) |
| G51569 | NA | non-coding | upstream | 216984 | 23479044 ~ 23480048 (+) |
| G51568 | NA | non-coding | upstream | 221235 | 23474928 ~ 23475797 (+) |
| G51767 | NA | non-coding | downstream | 22718 | 23720012 ~ 23720215 (+) |
| G51772 | NA | non-coding | downstream | 27157 | 23724451 ~ 23724652 (+) |
| G51785 | mgme1 | non-coding | downstream | 71083 | 23768377 ~ 23840559 (+) |
| G51825 | NA | non-coding | downstream | 184733 | 23882027 ~ 23882326 (+) |
| G51836 | NA | non-coding | downstream | 276273 | 23973567 ~ 23988614 (+) |
| G51562 | NA | other | upstream | 241483 | 23454428 ~ 23455549 (+) |
| LOC113540861 | LOC108263311 | other | upstream | 783480 | 22911144 ~ 22913552 (+) |
| G51271 | znf318 | other | upstream | 910527 | 22784328 ~ 22786505 (+) |
| LOC113538739 | qki,LOC107696379,LOC107559772,LOC106605787,LOC107739475 | other | upstream | 1144280 | 22485310 ~ 22552752 (+) |
| wu:fj16a03 | NA | other | upstream | 1673221 | 22020322 ~ 22023811 (+) |
| slc29a3 | slc29a3 | other | downstream | 96386 | 23793680 ~ 23834851 (+) |
| LOC113540163 | NA | other | downstream | 357860 | 24055154 ~ 24057898 (+) |
| b3galnt2 | b3galnt2 | other | downstream | 652890 | 24350184 ~ 24402454 (+) |
| golga4 | golga4 | other | downstream | 1865108 | 25562402 ~ 25594936 (+) |
| acoxl | acoxl | other | downstream | 2104678 | 25801972 ~ 25846903 (+) |
