G51767


Basic Information

Item Value
gene id G51767
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 23720012 ~ 23720215 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU61184
CAACTGTTTTCCAGTTACTCCTTTACCTCTTTCAAATCCCTGTTGTTCTCCCCAATCTAGGTAAATATCTATAGGCAATGGTATTATTACCCAGTGCAACTAATTTGACTCTGCTAGCTCCTCTAGCATGTCACCTAGGATGGATGCTTTCCAATTTCTTCCCACTACTCCTTCCCAATCTACATAGGGCCACTCTTCGCTTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU61184 True 204 lncRNA 0.43 1 23720012 23720215

Neighbor

gene id symbol gene type direction distance location
si:dkey-78p8.1 NA coding upstream 269021 23428017 ~ 23450991 (+)
meis1b meis1,meis1b,LOC108423396,LOC107582672,LOC107660223,LOC108263472,LOC106613898,LOC101073206,LOC103387108,LOC107551348 coding upstream 443696 23220121 ~ 23276316 (+)
LOC113545030 NA coding upstream 604973 23114185 ~ 23115039 (+)
spred2b spred2,LOC108263653 coding upstream 618878 23071308 ~ 23101134 (+)
actr2b actr2,LOC108423375,LOC104930021,LOC107660226,LOC105008543 coding upstream 650368 23052228 ~ 23069644 (+)
lrrfip2 lrrfip2,LOC107679173 coding downstream 147936 23868151 ~ 23999400 (+)
LOC117596572 NA coding downstream 413408 24133623 ~ 24136847 (+)
ggps1 ggps1,LOC107728322 coding downstream 596488 24316703 ~ 24345368 (+)
cacul1 cacul1 coding downstream 696275 24416490 ~ 24440455 (+)
gpatch11 gpatch11 coding downstream 1462938 25183153 ~ 25191848 (+)
LOC113544527 NA non-coding upstream 68885 23640352 ~ 23651127 (+)
LOC117596653 NA non-coding upstream 103173 23612605 ~ 23616839 (+)
G51570 NA non-coding upstream 235179 23484478 ~ 23484833 (+)
G51569 NA non-coding upstream 239964 23479044 ~ 23480048 (+)
G51568 NA non-coding upstream 244215 23474928 ~ 23475797 (+)
G51772 NA non-coding downstream 4236 23724451 ~ 23724652 (+)
G51785 mgme1 non-coding downstream 48162 23768377 ~ 23840559 (+)
G51825 NA non-coding downstream 161812 23882027 ~ 23882326 (+)
G51836 NA non-coding downstream 253352 23973567 ~ 23988614 (+)
G51840 NA non-coding downstream 293303 24013518 ~ 24013718 (+)
G51749 NA other upstream 22718 23697032 ~ 23697294 (+)
G51562 NA other upstream 264463 23454428 ~ 23455549 (+)
LOC113540861 LOC108263311 other upstream 806460 22911144 ~ 22913552 (+)
G51271 znf318 other upstream 933507 22784328 ~ 22786505 (+)
LOC113538739 qki,LOC107696379,LOC107559772,LOC106605787,LOC107739475 other upstream 1167260 22485310 ~ 22552752 (+)
slc29a3 slc29a3 other downstream 73465 23793680 ~ 23834851 (+)
LOC113540163 NA other downstream 334939 24055154 ~ 24057898 (+)
b3galnt2 b3galnt2 other downstream 629969 24350184 ~ 24402454 (+)
golga4 golga4 other downstream 1842187 25562402 ~ 25594936 (+)
acoxl acoxl other downstream 2081757 25801972 ~ 25846903 (+)

Expression


Co-expression Network