slc29a3 (slc29a3)


Basic Information

Item Value
gene id slc29a3
gene name slc29a3
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 23793680 ~ 23834851 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU61214
gaggaagactCGCTTACCGACACTGAGAAAACACAGGACGTCAATGTCAGTGTTTTACTGATGGTGGGGAGCAGCtgttatgttaaatatatactcCCGTCTGATAGAAATACttgtttccattttaaatatttatgaatcaCTTGCGAAGATGAAACGGCAACGAAAACGTCTGAGTGAAGACTTCTGTGAGTAATCAGCCAGCTGAAGTGACTGAACCCTGTGACTAAGTTGTCGGAATGGATAGTACAAAGCACCTGCAGGGCAGTCTGAATTCCTTATATGTCCCCACACTTCACCCCACCATGTCTGATGaggagaggtcagaggtcaagctTGAGGAGGAGGGGGGGCATGTCACCCCTGCTTGCCCGCCACCGACCACATGACTCCTATTACCTTGTCTATGGCATATTTTTCATGCTGGGCATTGGCTCGCTGCTGCCATGGAACTTCTTCGTCACAGCCAAGCACTACTGGCTCTACAAACTAAACAACAGGTCTAGCCCGGCCAGCCACCAAGAGCTCAACACTGATCTCAGCGTGAGTGtatttgtgcatgtgcatgtttgtgGCTGTTATGACAGAATGGCATGTTATTCTATTCTAGAGGTTAAACCACCAAAATTGGTGTTTTCTAAATAGAGGACTTTGCGTTGCAGTTTTCTGTTAACATGACAAATTgtcttttttgtaatttttttttttgtgtaagagagaaaaagagagggtaGTGAGGAGATGATTGCTTAtggctgctgtaacataagtagtatcaggaactaaattgttgcATGG
>XM_034303047.1
ATGGATAGTACAAAGCACCTGCAGGGCAGTCTGAATTCCTTATATGTCCCCACACTTCACCCCACCATGTCTGATGaggagaggtcagagtcaagctTGAGGAGGAGGGGGGGCATGTCACCCCTGCTTGCCCGCCACCGACCACATGACTCCTATTACCTTGTCTATGGCATATTTTTCATGCTGGGCATTGGCTCGCTGCTGCCATGGAACTTCTTCGTCACAGCCAAGCACTACTGGCTCTACAAACTAAACAACAGGTCTAGCCCGGCCAGCCACCAAGAGCTCAACACTGATCTCAGCGATTACCTCGAGAGCTACCTTGCCATTGCCTCTACTGTTCCTTCAGTGTTGTGCCTAGTTCTCAACTACCTCCTAGTGAACAGGCTGTCCTCTGATGTCCGGATCCTTTTGTCTCTGGCTGTGATCCTGTTCGTGTTCATGGTCACTACAGTGCTGGTGAAGTTGGATGTGTCTGGCTGTAGACAGGAGTTCCTAGCCGGTACTCTGGCCAGTGTTGCACTGGTCAGTGGAGCCTCCAACATTTTCAGTGGCAGCATGTTCGGCATCAGCGCACATTTCCCCATGAGGATATCACAAGCTCTCATATCAGGTCAAGCCATGGGTGGCACTTTGAGTGCAGTAGCATCCATAGTGGATCTGGCTGCAGCAAGTGATGTGACCAGCAGTGCATTGGCTTACTTCCTTACTGCTGACGTCTTCATTCTTCTCTGCATCATCATGTACCTGGTGCTGCCCAAACTGGCCTACTCCAGGTACTACCTGGAGGCTCCCTGCACTGGCACTGCCACTGCCACCACATCTGATAGCTCTTTGTCCACTCCAGAATCCACCAGCAATCCAACTGTTGTTTCTGTGCCCCCCCTCAAGCCCATCATGGGAAAGATGTGGACATTGAGCATATATGTCTTTTGGGTCTTCTTCATCTCCATTACCATCTTCCCAGCCATCTCCTCGGGCATCCAGTCGGTGGATAAAGACTCAGGCAGCCCCTGGAGCAGCACCTACTTTGTGCCACTCACCAGCTTCCTCCTGTACAATGTGGCAGACTTCTGTGGTAGGCAAACAACCATTTGGCTGCAGGTTCCTGGCCCGACCAGCCCTGTGTTACCTATCTTTGTGGCTTGCAGGACTGCATTTGTGCCACTCTTTATGTTCTGTAACTACCAGCCTCGGTATCACCTGCACCAGGTATTTTTTGCCCATGACATCTTCCCTGTGCTGTTTATTTGCCTGCTGGGGTTCTCCAATGGATATTTGGGCACACTGACCATGATGTATGGGCCCAAGGTGGTGCCACGTGACCTGGCAGAACCAGCTGGTGTGATCATGTCATTCTTCCTGGCAGCAGGGCTTGCGGCAGGCTCTGCCCTCTCTGTTTTGCTTGTCTACATCTTCTGACAGTAGCAAACTTTAAACAGTTTTCCTAAAATGGGCTAAATGTAGGTGTTTACATGGAACTCCACCGAATTGTTCAATTTAATTGTTTGAGTATTCTTACTTTAAGGCCAGGTTTATACTTGATGCATTACTATGTGTGCAGGTATAGATGCAGCTCGACAAATTTTACAGCTTCACACAGTTCACAAAGTTTCTTGCGTCGAAACTGGTCACTTGTAGATTCAAGGGTGGTTGGGGAAATGGGGTAATTTTTTGTACTAAGTTTCTAATTTGAAAGAAGCAGGTGAATGTTAAGCAAGTTATATTTGGCTGACAGGGatgaaaagaatgagaaaacCCCATCCTCATATGTATTGTTAATTGTTACGAGGCCATTGACTGACCAAATGCAGAAAGGAATGGTCAGTGGTTGGAGGTTTTGGGAGGCAGGGAGCAAACTTTGAATTTAattatgtacaaaataaaaatattacaaaatagtTTGataggaatattttttttattaaggtaaaaaaaaaa

Function

symbol description
slc29a3 Predicted to enable nucleoside transmembrane transporter activity. Predicted to act upstream of or within nucleoside transmembrane transport. Predicted to be located in lysosomal membrane. Predicted to be active in Golgi apparatus and plasma membrane. Predicted to be integral component of membrane. Human ortholog(s) of this gene implicated in histiocytosis-lymphadenopathy plus syndrome. Orthologous to human SLC29A3 (solute carrier family 29 member 3).

NR:

description
PREDICTED: equilibrative nucleoside transporter 3

GO: NA

KEGG:

id description
K15014 SLC29A1_2_3, ENT1_2_3; solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
TU61214 False 798 TUCP 0.44 2 23793680 23805495
XM_034303047.1 True 1941 mRNA 0.48 6 23804937 23834851

Neighbor

gene id symbol gene type direction distance location
si:dkey-78p8.1 NA coding upstream 342689 23428017 ~ 23450991 (+)
meis1b meis1,meis1b,LOC108423396,LOC107582672,LOC107660223,LOC108263472,LOC106613898,LOC101073206,LOC103387108,LOC107551348 coding upstream 517364 23220121 ~ 23276316 (+)
LOC113545030 NA coding upstream 678641 23114185 ~ 23115039 (+)
spred2b spred2,LOC108263653 coding upstream 692546 23071308 ~ 23101134 (+)
actr2b actr2,LOC108423375,LOC104930021,LOC107660226,LOC105008543 coding upstream 724036 23052228 ~ 23069644 (+)
lrrfip2 lrrfip2,LOC107679173 coding downstream 33300 23868151 ~ 23999400 (+)
LOC117596572 NA coding downstream 298772 24133623 ~ 24136847 (+)
ggps1 ggps1,LOC107728322 coding downstream 481852 24316703 ~ 24345368 (+)
cacul1 cacul1 coding downstream 581639 24416490 ~ 24440455 (+)
gpatch11 gpatch11 coding downstream 1348302 25183153 ~ 25191848 (+)
G51772 NA non-coding upstream 69028 23724451 ~ 23724652 (+)
G51767 NA non-coding upstream 73465 23720012 ~ 23720215 (+)
LOC113544527 NA non-coding upstream 142553 23640352 ~ 23651127 (+)
LOC117596653 NA non-coding upstream 176841 23612605 ~ 23616839 (+)
G51570 NA non-coding upstream 308847 23484478 ~ 23484833 (+)
G51825 NA non-coding downstream 47176 23882027 ~ 23882326 (+)
G51836 NA non-coding downstream 138716 23973567 ~ 23988614 (+)
G51840 NA non-coding downstream 178667 24013518 ~ 24013718 (+)
G51944 NA non-coding downstream 302060 24136911 ~ 24137372 (+)
G51945 NA non-coding downstream 325899 24160750 ~ 24167875 (+)
G51749 NA other upstream 96386 23697032 ~ 23697294 (+)
G51562 NA other upstream 338131 23454428 ~ 23455549 (+)
LOC113540861 LOC108263311 other upstream 880128 22911144 ~ 22913552 (+)
G51271 znf318 other upstream 1007175 22784328 ~ 22786505 (+)
LOC113538739 qki,LOC107696379,LOC107559772,LOC106605787,LOC107739475 other upstream 1240928 22485310 ~ 22552752 (+)
LOC113540163 NA other downstream 220303 24055154 ~ 24057898 (+)
b3galnt2 b3galnt2 other downstream 515333 24350184 ~ 24402454 (+)
golga4 golga4 other downstream 1727551 25562402 ~ 25594936 (+)
acoxl acoxl other downstream 1967121 25801972 ~ 25846903 (+)
bcl2l11 bcl2l11 other downstream 2015749 25850600 ~ 25864346 (+)

Expression


Co-expression Network