G53312 (dst)


Basic Information

Item Value
gene id G53312
gene name dst
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 27111544 ~ 27121939 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU63002
TGGCTGCATCAATGGCCTGGAGAATTGCGTTACGTCTCTCAGATGATAAATGGCAAACATCTGTGAAAGCAGCTTGCAAATCTACAAAAACTGTAGCTAAATCGTGTTGGACTTGTGTGGGGATGAGTTCATCAGCAGATTTTAAAAGCTGCTCAGCTACCTCCAAATCTGAGGttaaaatgtcaggaaatgtaGCAAGCTGTGCTTCCAAAGActagaaacaaaaatgtttggGATTAGAGATTATACAAACAGGAACAAGATGATAAATGGAGATGGATGAAAATATATCTAGCTAGTAAAGCAGATGTACAAAGTCAGAAGAAAGTGAGCAAGAAAAAGCACTTGAGTATGTGAAGCATTAACAAAAATCCAACATTGCAATGATGGACAAACCTGAGCTGCTTCCAGTTGGTCTTGTAAACCTTCAATGTGAGTTGCTAAAGGACCTTGGGTCAAAAAATCATTCCTGATGTCTTCAAGTGTGTCATAGTGATCCTGGAGTTTACCAACACATTCCAAATAATCCTGGGTGGAACATTTCTGCAACATATtccaaaataattattatttgataattatttatagtaaaataatactaattcaaattcaaaatgtatCAAGTTAAATGCTCACTCTGGGTCTAACTGTGACCTCCTCTCCTTCCTCAATGATTGAAATGTTTGCCTTAGAGCACTGCTGACTGGACAAAGCTGATTGAAAGACATCATTGTCGCAACTATCACTGGCAGCAGCTTTGGGCTGAATTTCAATACTTTCCATACATGAGCCTTCATCTCCCTGAGCAGTGGTTCTCGGCAGACCTAAAATTTCTTTGGACATTTCTGGTTCTTTGTCAGCAGACATCTCCTTAATCATCTCTTGAAGCTGTGACTGCATTAGCACTGGACTACTTGTTTCCTGAGCATAACCAGTAACATCAGATGAAAACTTCTCTTGATTTACACACCCTGGAAGAACTCCCTTATGCTCGCTCAAATCCTTGAGCAGACCTGGATCTTTGCTCTCTACAAGGACCTGAATGACATTTGTGTCATGTTGAGTTGCAGCAGTGGGTGAGATGCTCTCATTGTTGTCAAGGGCTTGCCTTTCCTTGCTCTGGATCTCATTTACAGCTCCTTTCACTGCAGTTTTTTCCAGTTCATTTAAATAAGTTGGTGGAAATTCACTCTCTGTCACTGAAGAATTTGCACATAGCTTATCTCCATTATTGTTGGAGTGTTGGGGAGTATGAACATTAAGCAAGTCTTTGTGTGATGAATTTGTTGGAATAGTGGACTTCAGTGTAACAGATTTTGAAGACTGTTCTCCCACAATGTGCGCTGGAGTGACGGCAGTTTTGTTCTTTATGGTTCCTGTATCATATCTGTTTTTCTCGGATATGACAAAGCCTGAAGTAGGCAGACTGGAGTCAGTTGCTGTATCAGGTACTTGCTCAGCTAAGTGCTGCTTATTAATTGAGTCATCACTGAGAGTTACATCTGGCAGGAACTTCAAGGTGGGACTTGTTTTGGGAGTGTCTCCACAGCAAAGCTGTGACATGTCTATAGACTCTGAGGTGTTGACACTGACCAGGTCAAAATTGTCAATACTGACACCAATATGACTGGATTGGGTCTCTACTGCTTTGAATGCTGCATGGTCATTAACTGTTCCTGACTTGCACTCATGCTCAGGTCCCGCCACGATCCCACTACTCTTGCTAATTGTACACTGATTCAGATCTTTCTCGTTCATGTTTGTTTGAACAAAACAATCTACTGACCAAGACAATACACTGTCTTCCTGATCTTGCACATCTTCATTTGATTCGGGACTCATAATTGTTTTCCCTGCAGCTCTCATGTCTGATAACTGAAGTAATGTAGAAGAAGATAAAGACGGTTCATTATCTGCTAGTGTTTTGATATCTTCTATACCAGGTAAGCTCTCTGAACCTGTTTCAGTGGGGGATGTACCTGCTGTTTGCTGTGGCTCATTGAAAGCACTGTGCTGTTTGTGTATATTCACTAAGCTCTCTGATTTCTTTTCATCAGAATAAACATCACTTTGCAATGAACAGGATGTGTCAGAGTCACTCTCAACAGAACTTCTCCTCTGGTTTACCGCTGCTTCATTGAAAGCCACATCCCTAACACTGGCTAAAGGAGCTTGACATAATGCATTAAAGGCAATATTATGAGAAATTCCATCATTATGATAATTCTCTTTTTCTGGAGCATTCCCCAACTCTGTACAATTTCTACCTCCATTGTTTTTGGTATCCAAACAATCTGAATTGTCAACATCCTCTAAACCATGGGCATGGACAATTCGCTCAACCTCATCCTGTTTTCCTGAATCAAAACCAGTAGCTGAAGGAATATTACTAACTGTCTTTAAGAGCAATGTGGAGTTCAGAGTAGTCATTTGTGTTGTGTCTGTTAATACGTGAGTGGTGACGTCTGTTCTTTTCACTAAATCAGCACATGGACATTTTTCACCCAGCTCCTTATCAGTGATTGCCTCACTAACTGGATTTGAGTCCAAACTACTGATCATTTGGGTTGAGCTGTTTAATAGAGGAGTGGCTTCCTCTGTCCTGTTCACTGAATTTTCAGTATTTCCTGATAGAAAATTGGTTTCCTTTGTTCTTTTCACTTCAGTTTCAGTACTTAGACATTTGTCATACAACAATTTGTCAGTGATCTCATCACTGACTGTGTTTAAGGTAAATGTTGAGTCTAAACAACTGGACATTTGTATTGAGCTGCTTACAGGAGTGTCGTTTTCTGTCCTGTTCACTACATTTTCAGTACTTCGACATTTTTCAGTAAACTCCTCATCAGAGATCTCATCACTAAATGGCTTTAAAGTGAATGAGTCCAAACTACTGGTTATTTGTGCTGAATTCATTAACAGAGGTGTGGCTTCCTCTGTTCTGTTCACCGCATTTTCAATACTTGGACATTTTTGACTAAAATCCTCAGCAGGGATCTCATCACTGTCTGCCATGTAGGTGAATGATGAATCCAAACTGCTGGTCATTTGTGTTAAGTTTGTTGATAAAGAAGCTTCATCTGATGTCCTCACTGCATTTTCAGTACTTGGACATATTTTGCCAAAAGCATCTTCAGTGATTTCCTCACTAACTGTCTTTAAAGTGAACGAGGAGTCCAAACTACTGATCATTTGTGCCGAAGTCATTAATAGAGGACTGGCTTCCTCTGTTCTGTTCACTGCATCTTCAGtacttggatgttttttgcttaGGTCCTCAGCAGGGATCTCATCACTATCTGCCATGAAGGTGAATGATGAATCCAAACTGCTGGTCATTTGCGTTAAGTGTATTGATAAAGATGCTTCATCTGATGTCCTCACTGCATTTTCACTTGGacatttttcaccaaacatgtcATTAGTGACTTCCTCTGTATTTAAGGTGAACTGAGTTGTCCTCAATGAACTTTCAGTACTTGGACTTTTTTCACCAATTGTGTCATCAGTGATCTCCTTACTAGCTGTCTTTAAGGGGAATGAGGACTCTAAACTGCCACTCATTAATGGAGGAGGACATTTTTCATCAGGGATCTCAGCGGACTTTAGGGCGAATGATGAGTCCAAACTGTATATATCCTGTGTTGTGTTGGTTTTCAGCTCATCTTCAATACTTTGACATTTTTTACCAAGTTTCTCGGCAGTGATCTCATCATCGCTAACTGTCTTTAAGGTGAAAGCTGAGTCCAAACTACTGGCTATTTGTGTTGAAGTTGTTAAGATTTCAGAGTCTTCATTTGTGCTTTTCATTGTATTTTCAGCACTTGGACATTTTTCAGCATTCTCATTTCTAATCTTTAAGGTGAATGATGAGTTCAAACTACTTTCAGTACATGGACATTTTTCACCAGTAATTTCATCACTAATTGGCAGTAACAATGCTGAGTTCAGACTACTGGTCGTTTGTGCCGAGTTTATTAACAGAGGATTGTTTTGCTctgttcttttcatttcagtttcagtactCATATATTTTTCACCAAACCCCTCAGCAGTTACATCAGCACTAACTGTTCTTTGCGAAAATGATGAGTCCAAACTACTGGGCAATCgtgttgtgtttattaatgGAGTGTCGTCCTCTGATCTTTCCACTTTATTTTCAGTACTTAAacatttttcaccaaactcTCCAGCAGTGATTTTGTCAAGAACTGTCTTTAAGGTGACTGACGGACCCAAAGTACTGGTCAATTGTGTTGAAGTTGATAATACACTAGTGACATAATCTGGcctttttattgcattttcagTACTTGGAGATTTTTCAGAAGCGATCTCATCACTAACTGTATTTAAGGTAAACAGCGAGTCCAAACTACTGatcatttgttttgaatttgctGAGAGATGAGTGTCTTCTTCTGTtctatttcctgttttgttaGTACTTGGAAATTTTTCAGTTAAGTCCACAGCAGGCATCTCAaaactctctttctctgcatcgCTATCTGACTTTAACAGGAAGGATGAGTCTAAACCCCTGGtaatttgttttgaatttgctGATAGATGATTGTCTTCTGGtctttttattgaattttcagTACTTGGACATTTTCCTCCAAGTTCATGAAAGATCTCCTCATTACTAACTGCCTTAAAGGTAAATGATGTGTCTAAACTACTCTTACTTTGTATGGAGTTTTCTGACAGATAGTAGTCTTCTTCCAGTGTTTGCATCTCAATTTCAGTATTTAGACCTTTATCACTAAAATCCCCATCAGTGATGTCCTTTTCACTTAATGTCTCTAAGGCATATGATGTGTCCAAGCTATCGGTCATTTGCGTTGATTGTGTTGCTAATAGATTAGAGGCTTTCTCCGTTTGCTTCAcctcattttcagttttcagacacttttcatcaaactCCTCATCAGTGATCCCCTCACCAGTAACTGTCTTCAAGCTAGATGCTGAGCTACCAGTGAATTGTGTTAAATTTGTTAACAGAGCATTGCTTTCAACTGTTCTTATTAATCCATACTCAGTACTTGGacatttttcaccaaactcCTCAGCAACAATCTCCTCATCAGTAACTATCTTTAAGGACTTTGGATGACTTTGGACTTTGGATGAGTCCAAAGTGTTGGTCAATTGTGTTGAAGTTGCTAATAGATTAGTGACTTCATCTGGCCTTTTCATTGCATTTTCAGTACTTGGAGAATTTTCAGCAAACTCTTCAACAGTGATATCCTGAGAGCGAACTGTATTTAAGATGAATGATGAGTCCAAACTACTGGTCATTCGATTTGAAATTGTTAATTCTTCTGTTAGATTGCCTGCATTTTCAGTACTAGCACATTTTTCACTTAAGTCCACAGCAGGGATCTCAATACTGTCTTTCTCCTGAGCAGTGATCTTATCGTCACTAAGTGTCTTTAACAGGAAGGTTGAGTCTAATCCACTGGTCATTTGTGATGAAGTTGCTAACAGATTTTCAGTACTTGGACATATTCCCCCAATCTCCTCGGCAATGACCTCCTCATTCCTAACTGTATTTAAGCTAAAAGACGAGTCCAAAATACTGGTCATTTGTTTCGAGTTTGTTGATAGATGAGTTTCATCTCCTGACCTATTCACTGTATTTTCAGTACTTGGACATTTTTCACTGAAGTCCACAGCAGGGATCTCATGACTATCTGCTTCCTTATCACAAACTGTCTTTGCCTTAGACACACTGCAAACATACTTTCCATCAGGATCAGTGGTGGCCTTCTGGGCTACTTCTGAATCAAGGACAAAGCTGCCAATATCATCAGTAATCAAACCCATCTCCCAAGCCTCCCTAGCACTGATGCTTTTTCCAGTTGAGTCATAGAAACCACTAAGTAAATTTTGCTGCTGCATGATTTGTAAAGCTATGTAAGATGATATGTAGCTTTGTGACACAGCTTGTTTCAGTACTGACATGGTCACGGTTTTGTTTCTTATGACATTGCGCCTTCCAAACTGCAGTGCAAGTACCTCTAACACAGTCTCTTCATCAATGAGGCCCTTATCAAAAGCATCATTAAGGTTGTATCGCTTTCCAGAGGTGGCATCTAAAATGCCCCCCTCTTTTAATTGGTCCCTCAGAAGGCATAACACATGGTCTCTTTCAAGCTTGTTATCATACACACCTTCACAATGTGAGTATTCAGTGAGCAAATCAAAATTTGTAGCTTTTTTACTGCTTAGAACAGAGCACTGTGTGGGGTCTTCATCTTTTGCTAGAACTGAATTTTCTCTGTGATTCAAAGGTACAGTCTTCTCTACTTCTGAAAGCAAATTTGTTTGATTGACAATTTCAGGATTTAATTTTTGTGAAATGTGCATTCCTGTGCATGTATCTGTAAATGGATcctcaggtgcactttcatttGTCTTAATCTCAGATGCTGAAGCTTTATATGGAGCACTTTCCAGtgacatattaaatatttcaccTGACCCTGAGGTATGACTGTCAGACTCAATAGTTGAAGTTTTTATACAATGATCACCCTCTGCAGAGACCTCTGAAATACTCTCTTCTGCTATTCTTGGTAAAGGCTCATCAATATGCAGAACTGCCAATtcaccagtgtgtgtgatgtgtgcatCATCTGGAAAGTCCTCATCTAGAGATGAATCATGGATATTAGCATGTGTGTCAGTTTCTGACATTTCTAGCAGTACTTGtgccattttatttaattgccTATCAAAAATTAAAAGCCTCTGTCCTGATTTGGGGTCCATGTAGCTGttcatcattaaaaatgaaacaaaaagttGTTTGGCTTCCAAGGAAGATGGGGCGTTTATACTCTTTTCATTAGCTTCCAATCCTTCTCTGGATTTTTGAGATCCCTCAATTTGAAGCTCACGCATTACTAGCCATGATGAAAATTTGTCATTGAGATCATCTACATCAGGGAACATATCTGGTATCTCTATCGTTTTTAAAAAGTCTACTGTGCAAGCATTGATGAAACCATTCTGTGCAGCAGAGTCAATATCAACTACCTCAGAGCTCTCTGGTATGTAAAATGCTGCTATTTTATGTCTGTTACACAGAAGCTCATGTGCCAGTTTCTCAGTGATGATTTCATGCTGTACGGACATCGAGACAGAGAGGATTTCACCAGAGTGAGGCCAGAGGAGGCCcatgaaacatttctgtctcTCCAGAACTAACAGAGCACTTCTGGAACTCATTAAATCACACTGAACAGCTTCATCGACTGCCAGTCTAGCCCCGTTTTTAGGGTTTACAATGCcaccattttgggcttggtGGCTCAGAATTCCACTGGCAGTGTCCTGATCAATAAGACCCTCAGATACGGCCTCTTCTACTGTAAGCTTACAGTTTGTTCTAGGATCAACTATGCCTCCTGCAAACAGCTGCGCACTCAGCAGCCGGAGCATGGTCTCTCGATCTATCAGACCCTCATGCATCGCTCTCACAATGCTGACCTCTCTCCCAGATGTAAATGCTATGCTTCCATCTTTTGTAGACTTCACCGCCAGCAAACGAAGCCCTGTCTCCTCATGCACAATGCTCCTCTGCACAAGCTGAATAAGAGAAACTTTTTCAGCTGTATTAGGATCAATCAAATCCTTCCAAGTATTCTGTCtttgtaatatttgaatatagaGAGACTGGGGAATTAGGCCAAATTCAAATGCCCTCTCAAGACTTAAACACTCTCCAGTGCATGTCACTCTTAACCCACCAGTGGCTAGCTGGATTTCAATGATCTTTACAGCTAGACGTTCAGAAATTGCCCCATCCTTCACTGCAGCTACCGTCGGCAAGGGTTCAGAAGCATAACGTGGACTCTGAATGCATTTATTGGCTTCATTCAAGTCTTGCAGTTGCTTATACATGGGTTCATCCACGAGGCTGTGCTTGAATGCATCCTCCAAGTCTAGACACATGTGGAATTCAGGTAAGATGAGTTCAGATGTTATGAGCTGGGCCTCAAGGAGACTGAGCCCAGTGCAGTGGTCAATGAGACCGTTCTGCACTGCACGACAAACAGACAGCACTGCTCCTCTTCCCACATCGAGAATGCCTTCGATGACTTCAAACTCCTGCAATACAAGGAATCTGAATGAAGTGTGCATCGCGGATGTGAAATTATTTACAGCTTTTATAATTCTTTcgttatgtttaaaatgtactcACCCATAAAACAAGTCTACAGTTCATTTTCAACAGTCAAATCAGACTTTCAACAGCAAGAAGAGTAGAATTAAAAGCTCTCATGCATCTGTGGACAGAACTTTCAGCATCTTGCAAAAACAACAACGTCGGTTAAAGACAACACAAAGAGTATTACTGCAGTGTGGCAAAAAACTTTAAAGAGTGAGGGCGGATGAGGTTTGCTGTGAAGTAAGAATGAGTAGCATTAAAAACTCATGCTCTGCTATGTTTACAGCATACTCAGTTCActctgtacagaaaaaaaaaaaaaaaaaaacccttaccCAGTGATGAGTTTAAAATGTTAGCGTGATTGTACATTTGAAACCTTTCATACAGGGGTCATGCTCATGTGCTGAGGCTTCAACATGTTAGACATGCACTGAGAACAGCATTTGTCACACATTAACAGGCACTGACATTTGTCACTCATTTAGTTGGTGCAGAATGAGTTCATCCGCCTCACCTGTTCAGCAGAGGGTGTCTGGTTCACACTCATCTGAGAGAGATCACTGTAGGCTTGGTGGAGGAGTTTTAGCTGTTCTTTTGCCTCAGACTTTTCCTCCTCAGACATCCTAATGAGAAAATAAGATCATTCATAATTAAACTTACTGATATTAACAATAaagtggaaaatattttttcactgCTTGTTATGTCCAATgtgaaagaaataaaggaacATACTTGTCACTGTGCTTGGACAATATCTGCTGTGTACTTCTTAATGCTTCTGTTATTTGTTCCTTCTTTGACAAAACCTCTTCCATAGGAATCTGGTATAAGTGAAAAAGGATTTCATTATCAACTTTTTTTGCACTGTCCATAGCTTGTCAATTAGAAAAAACTGCCCACATCACATTGCACACTActgaattataattataaatgataaatgcaaacattttgTCAACAGGGTGTTAATATGTACAAATGGATCGTCAGTGTGTATACAAATTCCTGTATATTGCTGGACTAAGGAATGGGGATATAAATATTGGTATTTTAATGTGGAATGTTACTTTTTTGCTAGACCATTTGTTCAGGTAGTCATTTTAGGTtggcattttttaatttttcaatgaCTTTGTATGGTGTAAGACCACTGCATGGAtgatatgtttttataaatCATAACTGTCATGGCAACGTAGCATAACAACAGTAGTGAGAGCAAGGACAAATAGGCCACTATACATCTCTGGTGTCCACTCATTAAAAAAGGTCTCCTATCTGACTGAGCTCTCTATAATCCATGCAATCTATATAAGCCATGAGAATATGAACCCCAATGGATGTAACATTTTCTGTTCTGGCCAATTGGACAATACATAAAATGATAAGGCCTTTGGGCAACTTTTAAATGcatgaaaaatatatgtatgtgtaatcaGTGTGTTATGTATTTAAATGAAGGGAAATCTTTCTCATAAATTATTCTTTCATGCAGAACATATCTCTGCATAACTCTGCATGTGTACAATGTTGGTTATGTAAAGTATacgaataaaatgaataatcattATTCATCATTACCTTCTGTACTCTGTAGTTTACAAGTAAGATAATCTGAGTTGAAGTAAGGATGCTGTTATGCTACAGAGATATGTTTTCAGGCATGATACTGATTTACATGCAAATAAACAAGCATCCAGGGCAACTgcactgtttattataatgttttagaTCATATGTTGTATATGACGAATGTGAACTTTA

Function

symbol description
dst Is expressed in epidermis. Human ortholog(s) of this gene implicated in hereditary sensory and autonomic neuropathy type 6. Orthologous to human DST (dystonin).

NR:

description
PREDICTED: dystonin isoform X10

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU63002 True 9961 lncRNA 0.39 2 27111544 27121939

Neighbor

gene id symbol gene type direction distance location
gfral gfral coding upstream 177794 26925234 ~ 26933750 (+)
hcrtr2 hcrtr2 coding upstream 188293 26905497 ~ 26923251 (+)
fam83b fam83b coding upstream 224465 26873228 ~ 26887079 (+)
mlip mlip coding upstream 246407 26830224 ~ 26865137 (+)
LOC117596838 NA coding upstream 302036 26803195 ~ 26809508 (+)
bag2 bag2 coding downstream 85389 27207328 ~ 27213122 (+)
si:ch73-52p7.1 LOC108262847 coding downstream 123012 27244951 ~ 27257879 (+)
olig3 olig3 coding downstream 152577 27274516 ~ 27276329 (+)
tnfaip3 tnfaip3,LOC107597710,LOC107720364,LOC107681039,LOC107699163 coding downstream 192594 27314533 ~ 27327655 (+)
psmb1 psmb1,LOC107721174,LOC107699161,LOC107597712,LOC107701973 coding downstream 220982 27342921 ~ 27347922 (+)
LOC117596898 NA non-coding upstream 43364 27058878 ~ 27068180 (+)
LOC113542178 NA non-coding upstream 54546 27055764 ~ 27056998 (+)
G53316 NA non-coding upstream 74736 27033849 ~ 27036808 (+)
G53363 LOC108263596 non-coding upstream 92698 27017961 ~ 27018846 (+)
G53280 NA non-coding upstream 177279 26933938 ~ 26934265 (+)
G53340 NA non-coding downstream 121016 27242955 ~ 27244158 (+)
LOC117596902 NA non-coding downstream 139192 27261131 ~ 27273177 (+)
G53402 NA non-coding downstream 215108 27337047 ~ 27341096 (+)
LOC113541894 wdr92 non-coding downstream 226971 27348910 ~ 27355673 (+)
LOC113542161 NA non-coding downstream 405926 27527865 ~ 27530466 (+)
G53328 NA other upstream 118833 26985978 ~ 26992711 (+)
bcl2l11 bcl2l11 other upstream 1247198 25850600 ~ 25864346 (+)
acoxl acoxl other upstream 1264641 25801972 ~ 25846903 (+)
golga4 golga4 other upstream 1516608 25562402 ~ 25594936 (+)
b3galnt2 b3galnt2 other upstream 2709090 24350184 ~ 24402454 (+)
znf451 znf451 other downstream 75970 27197909 ~ 27207245 (+)
pde10a pde10a other downstream 1079096 28201035 ~ 28301823 (+)
G53692 NA other downstream 1325438 28447377 ~ 28448311 (+)
LOC113542011 glyat,LOC108263175,LOC108263176 other downstream 1344149 28466088 ~ 28496606 (+)
ablim1a LOC108263315,LOC108426144,LOC102784938 other downstream 2590319 29712258 ~ 29748505 (+)

Expression


Co-expression Network