mgst3b (LOC108263214,LOC103043280,LOC108426107,LOC106579764)


Basic Information

Item Value
gene id mgst3b
gene name LOC108263214,LOC103043280,LOC108426107,LOC106579764
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 30354303 ~ 30358454 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU65142
TGTGCCCTCGTTCCCTTTGTACAGATATAAATCATTTACGGCATCGTGACTGTGCAGTTTACTCGCCTTTTAAATAGTCTAGACGTCTGCACGGAATCTGTCGTGGAGAAAGGTTTTACCTGGAGCGTTGAACGATGGAGATTTTGGACATCCTCCCTGCCAACTTCGGCTACGTGATTCTGACTTACTTCTACAGCTGGGTCATGTTGACTTACCTTGGCGTTAACGTTGGACGTGCAAGGAAGAAGTATGATGTCAAGtaCCCCACTATGTACAGCACTAAGGACGAAATATTTAACTGCATCCAGAGAGCTCATCAGAACACACTGGAGGTTTATCCACAGTGGCTGGTTTTCCAGACCATTGCTGCACTAGTATATCCCaCCCGGCCAAGAGGATGAACGGGGCGTACGGCTATATCGGCCTCTTAGGAGTGATCATCCTGTCCCTGTCTGTTGCTCTGCAACTGCTTGGAGTTATTTAAGAGCATACAATTAAGCTCTACTCTCATATATGGCGCTGACCAAGTTTTCGTTTAAAGGCATTTTTCTGTAAACCTGTGATAGCTTgtttataacactgaccataacGTCCACTTATATAGAATGTGGACATGTGTATGAAATGAATTTCTTTTGTAGAACTATGAACTCTGATTCATAGCACTAACCCTATGTTTCCTTTCTAAAAGCATTAGcttaacatttttgtttctatatgtcacaaatatacagaacactgttttagtgggttttttttaaaaaaaaaaaacatttcatttgtcTTGTATTTCACATGCTattaaaatcagaataaaagtggacatttttattttaaactgtctCATTACATAATAAAATGGCATAATGGAGAAAAATGATTGTGAATTTC
>XM_026939152.2
GCGAGATTTCGCAGGCAGCTGTGCCCTCGTTCCCTTTGTACAGATATAAATCATTTACGGCATCGTGACTGTGCAGTTTACTCGCCTTTTAAATAGTCTAGACGTCTGCACGGAATCTGTCGTGGAGAAAGGTTTTACCTGGAGCGTTGAACGATGGAGATTTTGGACATCCTCCCTGCCAACTTCGGCTACGTGATTCTGACTTACTTCTACAGCTGGGTCATGTTGACTTACCTTGGCGTTAACGTTGGACGTGCAAGGAAGAAGTATGATGTCAAGtaCCCCACTATGTACAGCACTAAGGACGAAATATTTAACTGCATCCAGAGAGCTCATCAGAACACACTGGAGGTTTATCCACAGTGGCTGGTTTTCCAGACCATTGCTGCACTAGTATATCCCACGGCGGCCTCTGTTCTGGGAGTTATCTGGGTGACCAGCAGGTTATCTTACGCCTGGGGTTACTACACCGGCAaCCCGGCCAAGAGGATGAACGGGGCGTACGGCTATATCGGCCTCTTAGGAGTGATCATCCTGTCCCTGTCTGTTGCTCTGCAACTGCTTGGAGTTATTTAAGAGCATACAATTAAGCTCTACTCTCATATATGGCGCTGACCAAGTTTTCGTTTAAAGGCATTTTTCTGTAAACCTGTGATAGCTTgtttataacactgaccataacGTCCACTTATATAGAATGTGGACATGTGTATGAAATGAATTTCTTTTGTAGAACTATGAACTCTGATTCATAGCACTAACCCTATGTTTCCTTTCTAAAAGCATTAGcttaacatttttgtttctatatgtcacaaatatacagaacactgttttagtgggttttttttaaaaaaaaaaaacatttcatttgtcTTGTATTTCACATGCTattaaaatcagaataaaagtggacatttttattttaaactgtctCATTACATAATAAAATGGCATAATGGAGAAAAA

Function

NR:

description
microsomal glutathione S-transferase 3-like

GO: NA

KEGG:

id description
K00799 GST, gst; glutathione S-transferase

RNA

RNA id representative length rna type GC content exon number start site end site
TU65142 False 891 TUCP 0.39 3 30354322 30358454
XM_026939152.2 True 969 mRNA 0.41 4 30354303 30358440

Neighbor

gene id symbol gene type direction distance location
syf2 syf2,LOC107667968,LOC107679146,LOC107734269 coding upstream 20636 30328755 ~ 30333667 (+)
zbtb8os zbtb8os,LOC100304789 coding upstream 215218 30122016 ~ 30139085 (+)
zmp:0000000634 LOC108263435 coding upstream 238160 30112306 ~ 30116143 (+)
vsir NA coding upstream 428368 29908721 ~ 29925935 (+)
smoc2 smoc2,LOC107724603,LOC107679127 coding upstream 524420 29791901 ~ 29829883 (+)
tmem50a tmem50a,LOC107667962,LOC107724601 coding downstream 1931 30360385 ~ 30367419 (+)
maco1b tmem57,tmem57b,LOC107561778 coding downstream 20071 30378525 ~ 30395734 (+)
ldlrap1b ldlrap1,LOC107597650,LOC107561785 coding downstream 42847 30401301 ~ 30438810 (+)
LOC113542132 NA coding downstream 81484 30439938 ~ 30445972 (+)
eif3s10 eif3a,eif3s10 coding downstream 108864 30467318 ~ 30479031 (+)
LOC117596843 NA non-coding upstream 59969 30228211 ~ 30294334 (+)
G55152 NA non-coding upstream 122852 30227037 ~ 30231451 (+)
G55138 NA non-coding upstream 189597 30163355 ~ 30164706 (+)
G55132 NA non-coding upstream 197262 30148101 ~ 30157041 (+)
G55128 NA non-coding upstream 209194 30140224 ~ 30145109 (+)
G55283 LOC108263215 non-coding downstream 15397 30373851 ~ 30375488 (+)
G55287 NA non-coding downstream 23271 30381725 ~ 30397298 (+)
G55292 NA non-coding downstream 44433 30402887 ~ 30403143 (+)
G55334 NA non-coding downstream 260625 30619079 ~ 30623146 (+)
G55468 NA non-coding downstream 327463 30685917 ~ 30686155 (+)
G55091 NA other upstream 413122 29937548 ~ 29941181 (+)
ablim1a LOC108263315,LOC108426144,LOC102784938 other upstream 605798 29712258 ~ 29748505 (+)
LOC113542011 glyat,LOC108263175,LOC108263176 other upstream 1857697 28466088 ~ 28496606 (+)
G53692 NA other upstream 1905992 28447377 ~ 28448311 (+)
pde10a pde10a other upstream 2052480 28201035 ~ 28301823 (+)
LOC113542119 NA other downstream 121472 30479926 ~ 30486287 (+)
lbh lbh,LOC108263100 other downstream 1193561 31552015 ~ 31567173 (+)
G56222 NA other downstream 1424886 31783340 ~ 31796326 (+)
ppp2r5eb ppp2r5e,LOC102786035 other downstream 1499052 31857506 ~ 31933629 (+)
kcnh5b kcnh5,kcnh5b,kcnh5a,LOC107736800,LOC107683602,LOC107654906,LOC107743971,LOC108434995,LOC107602925 other downstream 1575805 31934259 ~ 31989051 (+)

Expression


Co-expression Network