Gene
RNA
| Item | Value |
|---|---|
| gene id | G56279 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 31728773 ~ 31730112 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66264 | True | 547 | lncRNA | 0.59 | 2 | 31728773 | 31730112 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc30a10 | LOC108263333 | coding | downstream | 108442 | 31613602 ~ 31620331 (-) |
| LOC113541870 | LOC108263097 | coding | downstream | 203873 | 31519040 ~ 31524900 (-) |
| si:ch1073-126c3.2 | NA | coding | downstream | 702928 | 31022661 ~ 31025845 (-) |
| gfra1a | gfra1a,LOC108263696,LOC107666504,LOC107568111,LOC108442611 | coding | downstream | 722311 | 30920905 ~ 31006462 (-) |
| trnag-gcc_2 | NA | coding | downstream | 973297 | 30755406 ~ 30755476 (-) |
| gphb5 | gphb5 | coding | upstream | 266397 | 31996509 ~ 32006650 (-) |
| esr2b | esr2 | coding | upstream | 401335 | 32131447 ~ 32188847 (-) |
| jag2a | LOC108263062 | coding | upstream | 461738 | 32191850 ~ 32230995 (-) |
| dcdc2b | dcdc2b | coding | upstream | 585346 | 32315458 ~ 32331216 (-) |
| iqcc | NA | coding | upstream | 601281 | 32331393 ~ 32336477 (-) |
| LOC117596876 | NA | non-coding | downstream | 52822 | 31657051 ~ 31675951 (-) |
| G56173 | NA | non-coding | downstream | 95447 | 31633095 ~ 31633326 (-) |
| G55992 | NA | non-coding | downstream | 405309 | 31323154 ~ 31323464 (-) |
| trnag-gcc_4 | NA | non-coding | downstream | 868267 | 30860436 ~ 30860506 (-) |
| trnag-gcc_3 | NA | non-coding | downstream | 876766 | 30851937 ~ 30852007 (-) |
| G56271 | NA | non-coding | upstream | 87141 | 31817253 ~ 31827134 (-) |
| G56315 | NA | non-coding | upstream | 114925 | 31845037 ~ 31846195 (-) |
| G56305 | NA | non-coding | upstream | 129695 | 31859807 ~ 31933590 (-) |
| G56614 | NA | non-coding | upstream | 340651 | 32070763 ~ 32072498 (-) |
| G56675 | NA | non-coding | upstream | 477377 | 32207489 ~ 32208007 (-) |
| G56150 | lclat1 | other | downstream | 128088 | 31563555 ~ 31600685 (-) |
| LOC113541990 | NA | other | downstream | 180140 | 31545901 ~ 31548633 (-) |
| rsrp1 | rsrp1 | other | downstream | 1384235 | 30340399 ~ 30344538 (-) |
| runx3 | runx3 | other | downstream | 1475317 | 30198325 ~ 30253456 (-) |
| khdrbs1a | khdrbs1a,LOC108263614,LOC108426153,LOC107679143,LOC107597656,LOC107724614 | other | downstream | 1567549 | 30152908 ~ 30161224 (-) |
| G56272 | NA | other | upstream | 97702 | 31827814 ~ 31829484 (-) |
| G56303 | NA | other | upstream | 107070 | 31837182 ~ 31838235 (-) |
| brf1a | brf1 | other | upstream | 509489 | 32239601 ~ 32289607 (-) |
| tmem39b | tmem39b,LOC107675583,LOC107705392 | other | upstream | 616643 | 32346755 ~ 32354500 (-) |
| ndufaf1 | ndufaf1,LOC107588570 | other | upstream | 644224 | 32374336 ~ 32389144 (-) |
