Gene
RNA
| Item | Value |
|---|---|
| gene id | G56315 |
| gene name | NA |
| gene type | non-coding |
| species | striped catfish (Pangasianodon hypophthalmus) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_047597.1 |
| NCBI id | CM018543.1 |
| chromosome length | 33776708 |
| location | 31845037 ~ 31846195 (-) |
| genome version | GENO_Phyp_1.0_2019_striped_catfish_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU66315 | True | 1009 | lncRNA | 0.41 | 2 | 31845037 | 31846195 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| slc30a10 | LOC108263333 | coding | downstream | 224706 | 31613602 ~ 31620331 (-) |
| LOC113541870 | LOC108263097 | coding | downstream | 320137 | 31519040 ~ 31524900 (-) |
| si:ch1073-126c3.2 | NA | coding | downstream | 819192 | 31022661 ~ 31025845 (-) |
| gfra1a | gfra1a,LOC108263696,LOC107666504,LOC107568111,LOC108442611 | coding | downstream | 838575 | 30920905 ~ 31006462 (-) |
| trnag-gcc_2 | NA | coding | downstream | 1089561 | 30755406 ~ 30755476 (-) |
| gphb5 | gphb5 | coding | upstream | 150314 | 31996509 ~ 32006650 (-) |
| esr2b | esr2 | coding | upstream | 285252 | 32131447 ~ 32188847 (-) |
| jag2a | LOC108263062 | coding | upstream | 345655 | 32191850 ~ 32230995 (-) |
| dcdc2b | dcdc2b | coding | upstream | 469263 | 32315458 ~ 32331216 (-) |
| iqcc | NA | coding | upstream | 485198 | 32331393 ~ 32336477 (-) |
| G56271 | NA | non-coding | downstream | 17903 | 31817253 ~ 31827134 (-) |
| G56279 | NA | non-coding | downstream | 114925 | 31728773 ~ 31730112 (-) |
| LOC117596876 | NA | non-coding | downstream | 169086 | 31657051 ~ 31675951 (-) |
| G56173 | NA | non-coding | downstream | 211711 | 31633095 ~ 31633326 (-) |
| G55992 | NA | non-coding | downstream | 521573 | 31323154 ~ 31323464 (-) |
| G56305 | NA | non-coding | upstream | 13612 | 31859807 ~ 31933590 (-) |
| G56614 | NA | non-coding | upstream | 224568 | 32070763 ~ 32072498 (-) |
| G56675 | NA | non-coding | upstream | 361294 | 32207489 ~ 32208007 (-) |
| G56693 | NA | non-coding | upstream | 397728 | 32243923 ~ 32244290 (-) |
| G56670 | NA | non-coding | upstream | 454111 | 32300306 ~ 32309955 (-) |
| G56303 | NA | other | downstream | 6802 | 31837182 ~ 31838235 (-) |
| fndc5a | fndc5,LOC106918218,LOC106948404 | other | downstream | 14105 | 31678383 ~ 31830932 (-) |
| G56272 | NA | other | downstream | 15553 | 31827814 ~ 31829484 (-) |
| G56150 | lclat1 | other | downstream | 244352 | 31563555 ~ 31600685 (-) |
| LOC113541990 | NA | other | downstream | 296404 | 31545901 ~ 31548633 (-) |
| brf1a | brf1 | other | upstream | 393406 | 32239601 ~ 32289607 (-) |
| tmem39b | tmem39b,LOC107675583,LOC107705392 | other | upstream | 500560 | 32346755 ~ 32354500 (-) |
| ndufaf1 | ndufaf1,LOC107588570 | other | upstream | 528141 | 32374336 ~ 32389144 (-) |
| slc66a3 | pqlc3 | other | upstream | 807641 | 32653836 ~ 32661612 (-) |
| G57124 | pdss2,LOC102782659 | other | upstream | 869632 | 32715827 ~ 32728741 (-) |
