G57210


Basic Information

Item Value
gene id G57210
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047597.1
NCBI id CM018543.1
chromosome length 33776708
location 33019278 ~ 33099572 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU67373
GGGGGAGTACCGTTACTTTACACATTAATCACTTCTTTTTGTagcatttttcaaaatgctaCAATGCGATTGTCAGTGAAAATACTAtgttatgcattttaaaaagaaaaaaaaacgatcGCTCTTCTTTATAGGTGAAATAAAACCTGGGAGCGTGTAAAGTAATTACATTCACATGGGGTTGAATTTCAGCCCATAAGCCAGAAATGAGGAAACAAGTCAACGATCCTCGAGATACAGTAAACAAGCCCGagtcagtatgtgtgtgtgtgtgtgtgtgtgggagtgtgtcaATCATGAGGTTGAAACAAAGAGGTGTTATTGTGCTTTGTGTCGGTGTGTATCGGGCCAGATTAAACACTCGGTGCAGGTATGTCACTCCGCTCGGgcgtctttctctgtctgtcagctCAGACGCCCCGAGCACATTTTCTACAGAACGCCTTCgccaaaacacactcacactaactcactctaactcacacacacacacacacacacgctcatgtCTAGCAGGTTTAAAGTGtgcttgtgtctctgtgtcacacacaaacacacacatgctttgcCAGTATCACGCTGTCAGACATGGGCGTTTTTttttttttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67373 True 619 TUCP 0.42 2 33019278 33099572

Neighbor

gene id symbol gene type direction distance location
rdh14a rdh14,LOC105895584,LOC104955673 coding downstream 150923 32865245 ~ 32868355 (-)
mtres1 c3h6orf203 coding downstream 254934 32759671 ~ 32764344 (-)
sobpa sobp,LOC107706905,LOC107588585 coding downstream 309067 32669506 ~ 32710211 (-)
arg2 arg2 coding downstream 483659 32525404 ~ 32535619 (-)
rdh12 rdh11,LOC108439707,LOC107585486,LOC107724212,LOC107705384,LOC107588583 coding downstream 502644 32509524 ~ 32516634 (-)
LOC113542112 NA coding upstream 187229 33286801 ~ 33293343 (-)
hif1aa hif1a coding upstream 206740 33306312 ~ 33321663 (-)
prkcha prkch,LOC107707065,LOC107675581,LOC107757130 coding upstream 229433 33329005 ~ 33336795 (-)
dhrs7 dhrs7 coding upstream 257458 33357030 ~ 33361865 (-)
six1a six1,six1b,LOC108263091,LOC108414064,LOC108257556,LOC107697302,LOC107589069,LOC108434988 coding upstream 285542 33385114 ~ 33387819 (-)
G57169 NA non-coding downstream 218806 32799111 ~ 32800472 (-)
G57126 NA non-coding downstream 243681 32729884 ~ 32775597 (-)
G56860 NA non-coding downstream 305345 32713729 ~ 32713933 (-)
G56834 NA non-coding downstream 354935 32663881 ~ 32664343 (-)
G56827 NA non-coding downstream 371342 32644692 ~ 32647936 (-)
G57267 NA non-coding upstream 135094 33234666 ~ 33235712 (-)
G57275 syt14 non-coding upstream 157657 33257229 ~ 33257792 (-)
G57290 NA non-coding upstream 197247 33296819 ~ 33298313 (-)
G57292 NA non-coding upstream 203998 33303570 ~ 33305518 (-)
G57294 NA non-coding upstream 226508 33326080 ~ 33360691 (-)
G57124 pdss2,LOC102782659 other downstream 290537 32715827 ~ 32728741 (-)
slc66a3 pqlc3 other downstream 357666 32653836 ~ 32661612 (-)
ndufaf1 ndufaf1,LOC107588570 other downstream 630134 32374336 ~ 32389144 (-)
tmem39b tmem39b,LOC107675583,LOC107705392 other downstream 664778 32346755 ~ 32354500 (-)
brf1a brf1 other downstream 729671 32239601 ~ 32289607 (-)
slc38a6 slc38a6 other upstream 237831 33337403 ~ 33344836 (-)
lrrc9 LOC108262921 other upstream 324092 33423664 ~ 33442815 (-)
G57322 NA other upstream 355650 33455222 ~ 33462342 (-)
mycla LOC108263077 other upstream 380776 33480348 ~ 33524819 (-)
trnag-gcc_5 NA other upstream 430355 33529927 ~ 33529997 (-)

Expression


Co-expression Network